RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 MAP7D2Q96T17 732 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 SLKQ9H2G2 1235 aaPredicted RBP10.05□□□□□ -0.8
COPB1-211ENST00000534234 RGS18Q9NS28 235 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 KCNJ14Q9UNX9 436 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 PLAGL2Q9UPG8 496 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 AKT3Q9Y243 479 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 H3BQ06 376 aaPredicted RBP10.05□□□□□ -0.8
COPB1-211ENST00000534234 GATMP50440 423 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 PRKCEQ02156 737 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 SCRN1Q12765 414 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 NONOQ15233 471 aaKnown RBP eCLIP10.05□□□□□ -0.8
COPB1-211ENST00000534234 UGCGQ16739 394 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 INF2Q27J81 1249 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 NAALADL2Q58DX5 795 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 FAM102BQ5T8I3 360 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 MIER3Q7Z3K6 550 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 KRT25Q7Z3Z0 450 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 RDM1Q8NG50 284 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 NEK9Q8TD19 979 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 P2RX5Q93086 422 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 C1orf112Q9NSG2 853 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 CLDND1Q9NY35 253 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 TPCN1Q9ULQ1 816 aa10.05□□□□□ -0.8
COPB1-211ENST00000534234 CCDC194A0A1B0GVG4 234 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 GRXCR2A6NFK2 248 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 C9IYK1 514 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 NCK2O43639 380 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 PFKFB2O60825 505 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 DTNBO60941 627 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 CSPG5O95196 566 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 XBP1P17861 261 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 EIF4BP23588 611 aaKnown RBP10.04□□□□□ -0.8
COPB1-211ENST00000534234 ANAPC15P60006 121 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 FAM189BP81408 668 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 TBC1D8BQ0IIM8 1120 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 CAMK1Q14012 370 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 COL19A1Q14993 1142 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 PUS10Q3MIT2 529 aaKnown RBP10.04□□□□□ -0.8
COPB1-211ENST00000534234 ERICH6BQ5W0A0 696 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 PTCRAQ6ISU1 281 aaPredicted RBP10.04□□□□□ -0.8
COPB1-211ENST00000534234 MOXD1Q6UVY6 613 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 B3GNT9Q6UX72 402 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 FAM228AQ86W67 206 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 ZNF710Q8N1W2 664 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 LINC01465Q8N7H1 131 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 KLHL23Q8NBE8 558 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 SPPL3Q8TCT6 385 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 ZNF668Q96K58 619 aaPredicted RBP10.04□□□□□ -0.8
COPB1-211ENST00000534234 MBOAT7Q96N66 472 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 PHF20Q9BVI0 1012 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 ADAMTS10Q9H324 1103 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 DDX25Q9UHL0 483 aaKnown RBP10.04□□□□□ -0.8
COPB1-211ENST00000534234 COL4A6Q14031 1691 aa10.04□□□□□ -0.8
COPB1-211ENST00000534234 TBKBP1A7MCY6 615 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 MMP1P03956 469 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 ITGB1P05556 798 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 IL9P15248 144 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 ZSCAN20P17040 1043 aaPredicted RBP10.03□□□□□ -0.8
COPB1-211ENST00000534234 HYAL1Q12794 435 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 DSC3Q14574 896 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 ANKRD1Q15327 319 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 TARBP2Q15633 366 aaKnown RBP10.03□□□□□ -0.8
COPB1-211ENST00000534234 CTC1Q2NKJ3 1217 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 LETM2Q2VYF4 491 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 XKR3Q5GH77 459 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 SPOUT1Q5T280 376 aaKnown RBP10.03□□□□□ -0.8
COPB1-211ENST00000534234 FAM178BQ8IXR5 827 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 ETNPPLQ8TBG4 499 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 C1QTNF1Q9BXJ1 281 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 NIFKQ9BYG3 293 aaKnown RBP10.03□□□□□ -0.8
COPB1-211ENST00000534234 IGFLR1Q9H665 355 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 EPHX3Q9H6B9 360 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 ATP6V0A4Q9HBG4 840 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 CD320Q9NPF0 282 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 GJB4Q9NTQ9 266 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 TMEM161AQ9NX61 479 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 PCDHB12Q9Y5F1 795 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 MICAL3Q7RTP6 2002 aa10.03□□□□□ -0.8
COPB1-211ENST00000534234 DDX11L8A8MPP1 907 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 SLC37A4O43826 429 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 STBD1O95210 358 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 COL9A1P20849 921 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 DNAJB1P25685 340 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 GTF2F1P35269 517 aaKnown RBP eCLIP10.02□□□□□ -0.813e-9■■■■■ 105.7
COPB1-211ENST00000534234 LTBRP36941 435 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 DNM2P50570 870 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 GPC3P51654 580 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 AK2P54819 239 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 CDC42EP1Q00587 391 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 MTERF2Q49AM1 385 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 NEK8Q86SG6 692 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 GJD3Q8N144 294 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 POF1BQ8WVV4 589 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 PPP2R3CQ969Q6 453 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 SCLT1Q96NL6 688 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 SH2D3AQ9BRG2 576 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 ELAC1Q9H777 363 aaKnown RBP10.02□□□□□ -0.81
COPB1-211ENST00000534234 AAASQ9NRG9 546 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 TYW1Q9NV66 732 aaKnown RBP10.02□□□□□ -0.81
COPB1-211ENST00000534234 ORC3Q9UBD5 711 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms