RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 PSMC5P62195 406 aa21.33■■□□□ 1.01
LRRK1-210ENST00000534045 SAFBQ15424 915 aaKnown RBP eCLIP21.33■■□□□ 1.01
LRRK1-210ENST00000534045 UGCGQ16739 394 aa21.33■■□□□ 1.01
LRRK1-210ENST00000534045 MTERF2Q49AM1 385 aa21.33■■□□□ 1.01
LRRK1-210ENST00000534045 RTN4RL1Q86UN2 441 aaPredicted RBP21.33■■□□□ 1.01
LRRK1-210ENST00000534045 LRRC71Q8N4P6 559 aa21.33■■□□□ 1.01
LRRK1-210ENST00000534045 NSUN7Q8NE18 718 aaKnown RBP21.33■■□□□ 1.01
LRRK1-210ENST00000534045 HLA-CQ95604 372 aa21.33■■□□□ 1.01
LRRK1-210ENST00000534045 ADGRA3Q8IWK6 1321 aa21.32■■□□□ 1
LRRK1-210ENST00000534045 H3BNC9 293 aa21.32■■□□□ 1
LRRK1-210ENST00000534045 TBX3O15119 743 aa21.32■■□□□ 1
LRRK1-210ENST00000534045 DGKIO75912 1065 aa21.32■■□□□ 1
LRRK1-210ENST00000534045 ZSCAN20P17040 1043 aaPredicted RBP21.32■■□□□ 1
LRRK1-210ENST00000534045 CDC42EP1Q00587 391 aa21.32■■□□□ 1
LRRK1-210ENST00000534045 SLFN12Q8IYM2 578 aa21.32■■□□□ 1
LRRK1-210ENST00000534045 BANK1Q8NDB2 785 aa21.32■■□□□ 1
LRRK1-210ENST00000534045 ADAM2Q99965 735 aa21.32■■□□□ 1
LRRK1-210ENST00000534045 C1orf112Q9NSG2 853 aa21.32■■□□□ 1
LRRK1-210ENST00000534045 EYSQ5T1H1 3165 aa21.31■■□□□ 1
LRRK1-210ENST00000534045 RB1P06400 928 aa21.31■■□□□ 1
LRRK1-210ENST00000534045 BMPR1AP36894 532 aa21.31■■□□□ 1
LRRK1-210ENST00000534045 QARSP47897 775 aaKnown RBP21.31■■□□□ 1
LRRK1-210ENST00000534045 NR5A1Q13285 461 aa21.31■■□□□ 1
LRRK1-210ENST00000534045 MRPL38Q96DV4 380 aaKnown RBP21.31■■□□□ 1
LRRK1-210ENST00000534045 JPH2Q9BR39 696 aaPredicted RBP21.31■■□□□ 1
LRRK1-210ENST00000534045 C11orf84Q9BUA3 381 aaPredicted RBP21.31■■□□□ 1
LRRK1-210ENST00000534045 NIFKQ9BYG3 293 aaKnown RBP21.31■■□□□ 1
LRRK1-210ENST00000534045 ERVK-5Q9HDB9 667 aa21.31■■□□□ 1
LRRK1-210ENST00000534045 CHD7Q9P2D1 2997 aa21.3■■□□□ 1
LRRK1-210ENST00000534045 JAK2O60674 1132 aa21.3■■□□□ 1
LRRK1-210ENST00000534045 GPR32O75388 356 aa21.3■■□□□ 1
LRRK1-210ENST00000534045 MMP1P03956 469 aa21.3■■□□□ 1
LRRK1-210ENST00000534045 P4HBP07237 508 aaKnown RBP21.3■■□□□ 1
LRRK1-210ENST00000534045 SARSP49591 514 aaKnown RBP21.3■■□□□ 1
LRRK1-210ENST00000534045 PPP2R5CQ13362 524 aa21.3■■□□□ 1
LRRK1-210ENST00000534045 SLC24A5Q71RS6 500 aa21.3■■□□□ 1
LRRK1-210ENST00000534045 DIS3L2Q8IYB7 885 aaKnown RBP21.3■■□□□ 1
LRRK1-210ENST00000534045 TMEM40Q8WWA1 233 aa21.3■■□□□ 1
LRRK1-210ENST00000534045 NLRP7Q8WX94 980 aa21.3■■□□□ 1
LRRK1-210ENST00000534045 LINC01599Q8WXQ3 324 aa21.3■■□□□ 1
LRRK1-210ENST00000534045 ZSCAN31Q96LW9 406 aaPredicted RBP21.3■■□□□ 1
LRRK1-210ENST00000534045 TMX1Q9H3N1 280 aa21.3■■□□□ 1
LRRK1-210ENST00000534045 KCNMB3Q9NPA1 279 aa21.3■■□□□ 1
LRRK1-210ENST00000534045 RALGAPA2Q2PPJ7 1873 aa21.3■■□□□ 1
LRRK1-210ENST00000534045 BTBD18B2RXH4 712 aa21.29■■□□□ 1
LRRK1-210ENST00000534045 EIF4BP23588 611 aaKnown RBP21.29■■□□□ 1
LRRK1-210ENST00000534045 TFF2Q03403 129 aa21.29■■□□□ 1
LRRK1-210ENST00000534045 PAN2Q504Q3 1202 aaKnown RBP21.29■■□□□ 1
LRRK1-210ENST00000534045 SPOUT1Q5T280 376 aaKnown RBP21.29■■□□□ 1
LRRK1-210ENST00000534045 NCAPH2Q6IBW4 605 aa21.29■■□□□ 1
LRRK1-210ENST00000534045 B3GNT9Q6UX72 402 aa21.29■■□□□ 1
LRRK1-210ENST00000534045 CCDC83Q8IWF9 413 aa21.29■■□□□ 1
LRRK1-210ENST00000534045 EXOC8Q8IYI6 725 aa21.29■■□□□ 1
LRRK1-210ENST00000534045 CMTR2Q8IYT2 770 aaKnown RBP21.29■■□□□ 1
LRRK1-210ENST00000534045 ZNF689Q96CS4 500 aaPredicted RBP21.29■■□□□ 1
LRRK1-210ENST00000534045 ZNF668Q96K58 619 aaPredicted RBP21.29■■□□□ 1
LRRK1-210ENST00000534045 UPF2Q9HAU5 1272 aaKnown RBP21.29■■□□□ 1
LRRK1-210ENST00000534045 RGS18Q9NS28 235 aa21.29■■□□□ 1
LRRK1-210ENST00000534045 TRANK1O15050 2925 aa21.29■■□□□ 1
LRRK1-210ENST00000534045 UNC80Q8N2C7 3258 aa21.28■■□□□ 1
LRRK1-210ENST00000534045 EPHA7Q15375 998 aa21.28■■□□□ 1
LRRK1-210ENST00000534045 OTUD6AQ7L8S5 288 aa21.28■■□□□ 1
LRRK1-210ENST00000534045 FAM228AQ86W67 206 aa21.28■■□□□ 1
LRRK1-210ENST00000534045 FAM184AQ8NB25 1140 aa21.28■■□□□ 1
LRRK1-210ENST00000534045 SH2D3AQ9BRG2 576 aa21.28■■□□□ 1
LRRK1-210ENST00000534045 GCOM2Q9BZD3 368 aaPredicted RBP21.28■■□□□ 1
LRRK1-210ENST00000534045 ATP6V0A4Q9HBG4 840 aa21.28■■□□□ 1
LRRK1-210ENST00000534045 PCDHA12Q9UN75 941 aa21.28■■□□□ 1
LRRK1-210ENST00000534045 EML1O00423 815 aa21.27■■□□□ 1
LRRK1-210ENST00000534045 GNL2Q13823 731 aaKnown RBP21.27■■□□□ 1
LRRK1-210ENST00000534045 TARBP2Q15633 366 aaKnown RBP21.27■■□□□ 1
LRRK1-210ENST00000534045 CALCRLQ16602 461 aa21.27■■□□□ 1
LRRK1-210ENST00000534045 TIGD5Q53EQ6 642 aa21.27■■□□□ 1
LRRK1-210ENST00000534045 EARS2Q5JPH6 523 aaKnown RBP21.27■■□□□ 1
LRRK1-210ENST00000534045 POTEDQ86YR6 584 aa21.27■■□□□ 1
LRRK1-210ENST00000534045 SLC7A3Q8WY07 619 aa21.27■■□□□ 1
LRRK1-210ENST00000534045 C8orf76Q96K31 380 aa21.27■■□□□ 1
LRRK1-210ENST00000534045 CEP170P1Q96L14 293 aa21.27■■□□□ 1
LRRK1-210ENST00000534045 LLPHQ9BRT6 129 aaKnown RBP21.27■■□□□ 1
LRRK1-210ENST00000534045 PLVAPQ9BX97 442 aa21.27■■□□□ 1
LRRK1-210ENST00000534045 INO80BQ9C086 356 aaPredicted RBP21.27■■□□□ 1
LRRK1-210ENST00000534045 SUCLA2Q9P2R7 463 aaPredicted RBP21.27■■□□□ 1
LRRK1-210ENST00000534045 VAV3Q9UKW4 847 aa21.27■■□□□ 1
LRRK1-210ENST00000534045 TMEM150BA6NC51 233 aa21.26■□□□□ 0.99
LRRK1-210ENST00000534045 MGEA5O60502 916 aa21.26■□□□□ 0.99
LRRK1-210ENST00000534045 ATP2B1P20020 1258 aa21.26■□□□□ 0.99
LRRK1-210ENST00000534045 GPC3P51654 580 aa21.26■□□□□ 0.99
LRRK1-210ENST00000534045 EP400NLQ6ZTU2 488 aa21.26■□□□□ 0.99
LRRK1-210ENST00000534045 ADAMTS19Q8TE59 1207 aa21.26■□□□□ 0.99
LRRK1-210ENST00000534045 HAS1Q92839 578 aa21.26■□□□□ 0.99
LRRK1-210ENST00000534045 CLP1Q92989 425 aaKnown RBP21.26■□□□□ 0.99
LRRK1-210ENST00000534045 LMAN2LQ9H0V9 348 aa21.26■□□□□ 0.99
LRRK1-210ENST00000534045 ADAMTS10Q9H324 1103 aa21.26■□□□□ 0.99
LRRK1-210ENST00000534045 CYP26B1Q9NR63 512 aa21.26■□□□□ 0.99
LRRK1-210ENST00000534045 SH2B1Q9NRF2 756 aaPredicted RBP21.26■□□□□ 0.99
LRRK1-210ENST00000534045 AAASQ9NRG9 546 aa21.26■□□□□ 0.99
LRRK1-210ENST00000534045 PRUNE2Q8WUY3 3088 aa21.25■□□□□ 0.99
LRRK1-210ENST00000534045 PRRC2BQ5JSZ5 2229 aaKnown RBP21.25■□□□□ 0.99
LRRK1-210ENST00000534045 FAM205CA6NFA0 338 aa21.25■□□□□ 0.99
LRRK1-210ENST00000534045 TBKBP1A7MCY6 615 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms