RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 CKAP2LQ8IYA6 745 aa20.47■□□□□ 0.87
UBXN1-216ENST00000533908 METTL13Q8N6R0 699 aa20.47■□□□□ 0.87
UBXN1-216ENST00000533908 RASGRP4Q8TDF6 673 aa20.47■□□□□ 0.87
UBXN1-216ENST00000533908 MICAL1Q8TDZ2 1067 aa20.47■□□□□ 0.87
UBXN1-216ENST00000533908 KCNB2Q92953 911 aa20.47■□□□□ 0.87
UBXN1-216ENST00000533908 PPP2R3CQ969Q6 453 aa20.47■□□□□ 0.87
UBXN1-216ENST00000533908 LENG9Q96B70 501 aa20.47■□□□□ 0.87
UBXN1-216ENST00000533908 POP1Q99575 1024 aaKnown RBP20.47■□□□□ 0.87
UBXN1-216ENST00000533908 TBC1D22BQ9NU19 505 aa20.47■□□□□ 0.87
UBXN1-216ENST00000533908 RNF19AQ9NV58 838 aa20.47■□□□□ 0.87
UBXN1-216ENST00000533908 GABBR1Q9UBS5 961 aa20.47■□□□□ 0.87
UBXN1-216ENST00000533908 PCDHB12Q9Y5F1 795 aa20.47■□□□□ 0.87
UBXN1-216ENST00000533908 TECTAO75443 2155 aa20.46■□□□□ 0.87
UBXN1-216ENST00000533908 PIEZO1Q92508 2521 aa20.46■□□□□ 0.87
UBXN1-216ENST00000533908 LOC730098B7Z3J9 87 aa20.46■□□□□ 0.87
UBXN1-216ENST00000533908 KRT32Q14532 448 aa20.46■□□□□ 0.87
UBXN1-216ENST00000533908 PRR16Q569H4 304 aa20.46■□□□□ 0.87
UBXN1-216ENST00000533908 SPOUT1Q5T280 376 aaKnown RBP20.46■□□□□ 0.87
UBXN1-216ENST00000533908 LINC01465Q8N7H1 131 aa20.46■□□□□ 0.87
UBXN1-216ENST00000533908 COLGALT1Q8NBJ5 622 aa20.46■□□□□ 0.87
UBXN1-216ENST00000533908 BRF1Q92994 677 aa20.46■□□□□ 0.87
UBXN1-216ENST00000533908 ADAMTS10Q9H324 1103 aa20.46■□□□□ 0.87
UBXN1-216ENST00000533908 C6orf50Q9HD87 102 aa20.46■□□□□ 0.87
UBXN1-216ENST00000533908 TMEM161AQ9NX61 479 aa20.46■□□□□ 0.87
UBXN1-216ENST00000533908 USP15Q9Y4E8 981 aaPredicted RBP20.46■□□□□ 0.87
UBXN1-216ENST00000533908 PCDHA10Q9Y5I2 948 aa20.46■□□□□ 0.87
UBXN1-216ENST00000533908 FSCN2O14926 492 aa20.45■□□□□ 0.86
UBXN1-216ENST00000533908 PRPF3O43395 683 aaKnown RBP20.45■□□□□ 0.86
UBXN1-216ENST00000533908 ZNF862O60290 1169 aa20.45■□□□□ 0.86
UBXN1-216ENST00000533908 CIITAP33076 1130 aa20.45■□□□□ 0.86
UBXN1-216ENST00000533908 CLCN3P51790 818 aa20.45■□□□□ 0.86
UBXN1-216ENST00000533908 UBE3AQ05086 875 aa20.45■□□□□ 0.86
UBXN1-216ENST00000533908 NTRK3Q16288 839 aa20.45■□□□□ 0.86
UBXN1-216ENST00000533908 FAM43BQ6ZT52 329 aaPredicted RBP20.45■□□□□ 0.86
UBXN1-216ENST00000533908 REXO1Q8N1G1 1221 aaKnown RBP20.45■□□□□ 0.86
UBXN1-216ENST00000533908 EDAQ92838 391 aa20.45■□□□□ 0.86
UBXN1-216ENST00000533908 PHKBQ93100 1093 aa20.45■□□□□ 0.86
UBXN1-216ENST00000533908 ZNF668Q96K58 619 aaPredicted RBP20.45■□□□□ 0.86
UBXN1-216ENST00000533908 CASD1Q96PB1 797 aa20.45■□□□□ 0.86
UBXN1-216ENST00000533908 ATP6V0A4Q9HBG4 840 aa20.45■□□□□ 0.86
UBXN1-216ENST00000533908 TLR9Q9NR96 1032 aa20.45■□□□□ 0.86
UBXN1-216ENST00000533908 ZNF318Q5VUA4 2279 aa20.44■□□□□ 0.86
UBXN1-216ENST00000533908 CDC45O75419 566 aa20.44■□□□□ 0.86
UBXN1-216ENST00000533908 PSAPP07602 524 aa20.44■□□□□ 0.86
UBXN1-216ENST00000533908 HMGB1P09429 215 aaKnown RBP20.44■□□□□ 0.86
UBXN1-216ENST00000533908 NLRP11P59045 1033 aaKnown RBP20.44■□□□□ 0.86
UBXN1-216ENST00000533908 NHLH1Q02575 133 aa20.44■□□□□ 0.86
UBXN1-216ENST00000533908 KCNC3Q14003 757 aa20.44■□□□□ 0.86
UBXN1-216ENST00000533908 CBX2Q14781 532 aaPredicted RBP20.44■□□□□ 0.86
UBXN1-216ENST00000533908 DUSP6Q16828 381 aa20.44■□□□□ 0.86
UBXN1-216ENST00000533908 ODR4Q5SWX8 454 aa20.44■□□□□ 0.86
UBXN1-216ENST00000533908 EFCAB12Q6NXP0 572 aa20.44■□□□□ 0.86
UBXN1-216ENST00000533908 SMAP1Q8IYB5 467 aaPredicted RBP20.44■□□□□ 0.86
UBXN1-216ENST00000533908 LRRC71Q8N4P6 559 aa20.44■□□□□ 0.86
UBXN1-216ENST00000533908 ELAC1Q9H777 363 aaKnown RBP20.44■□□□□ 0.86
UBXN1-216ENST00000533908 SNX14Q9Y5W7 946 aa20.44■□□□□ 0.86
UBXN1-216ENST00000533908 MYH9P35579 1960 aaKnown RBP20.43■□□□□ 0.86
UBXN1-216ENST00000533908 CCDC196A0A1B0GTZ2 297 aa20.43■□□□□ 0.86
UBXN1-216ENST00000533908 FGD1P98174 961 aa20.43■□□□□ 0.86
UBXN1-216ENST00000533908 SETQ01105 290 aaPredicted RBP20.43■□□□□ 0.86
UBXN1-216ENST00000533908 THNSL1Q8IYQ7 743 aa20.43■□□□□ 0.86
UBXN1-216ENST00000533908 GJA10Q969M2 543 aa20.43■□□□□ 0.86
UBXN1-216ENST00000533908 JAKMIP1Q96N16 626 aaKnown RBP20.43■□□□□ 0.86
UBXN1-216ENST00000533908 AAASQ9NRG9 546 aa20.43■□□□□ 0.86
UBXN1-216ENST00000533908 MSH4O15457 936 aa20.42■□□□□ 0.86
UBXN1-216ENST00000533908 PBX3P40426 434 aa20.42■□□□□ 0.86
UBXN1-216ENST00000533908 UGCGQ16739 394 aa20.42■□□□□ 0.86
UBXN1-216ENST00000533908 MCTP2Q6DN12 878 aa20.42■□□□□ 0.86
UBXN1-216ENST00000533908 SUSD6Q92537 303 aa20.42■□□□□ 0.86
UBXN1-216ENST00000533908 AGXT2Q9BYV1 514 aa20.42■□□□□ 0.86
UBXN1-216ENST00000533908 NID2Q14112 1375 aa20.42■□□□□ 0.86
UBXN1-216ENST00000533908 WDFY4Q6ZS81 3184 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 HIDE1A8MVS5 230 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 MAGEB2O15479 319 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 EIF4BP23588 611 aaKnown RBP20.41■□□□□ 0.86
UBXN1-216ENST00000533908 GNA11P29992 359 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 HSPA4P34932 840 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 PLCB3Q01970 1234 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 TRIM67Q6ZTA4 783 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 CENPQQ7L2Z9 268 aaPredicted RBP20.41■□□□□ 0.86
UBXN1-216ENST00000533908 FBXL16Q8N461 479 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 MRPS27Q92552 414 aaKnown RBP20.41■□□□□ 0.86
UBXN1-216ENST00000533908 RPGRIP1Q96KN7 1286 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 MFSD14AQ96MC6 490 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 PHF7Q9BWX1 381 aaPredicted RBP20.41■□□□□ 0.86
UBXN1-216ENST00000533908 TMEM117Q9H0C3 514 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 S1PR5Q9H228 398 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 DISC1Q9NRI5 854 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 RNF216Q9NWF9 866 aaPredicted RBP20.41■□□□□ 0.86
UBXN1-216ENST00000533908 AKT3Q9Y243 479 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 SAMM50Q9Y512 469 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 WDR81Q562E7 1941 aa20.41■□□□□ 0.86
UBXN1-216ENST00000533908 LAG3P18627 525 aa20.4■□□□□ 0.86
UBXN1-216ENST00000533908 FGFR4P22455 802 aa20.4■□□□□ 0.86
UBXN1-216ENST00000533908 MRE11P49959 708 aa20.4■□□□□ 0.86
UBXN1-216ENST00000533908 ZXDAP98168 799 aa20.4■□□□□ 0.86
UBXN1-216ENST00000533908 CLLU1OSQ5K130 101 aa20.4■□□□□ 0.86
UBXN1-216ENST00000533908 IER5LQ5T953 404 aa20.4■□□□□ 0.86
UBXN1-216ENST00000533908 PLPP4Q5VZY2 271 aa20.4■□□□□ 0.86
UBXN1-216ENST00000533908 KCNT2Q6UVM3 1135 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms