RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 KRT83P78385 493 aa13.1□□□□□ -0.31
CLP1-205ENST00000533682 FAM133AQ8N9E0 248 aa13.1□□□□□ -0.31
CLP1-205ENST00000533682 UBXN4Q92575 508 aa13.1□□□□□ -0.31
CLP1-205ENST00000533682 BORCS6Q96GS4 357 aa13.1□□□□□ -0.31
CLP1-205ENST00000533682 DEF6Q9H4E7 631 aa13.1□□□□□ -0.31
CLP1-205ENST00000533682 PCIF1Q9H4Z3 704 aa13.1□□□□□ -0.31
CLP1-205ENST00000533682 HAUS4Q9H6D7 363 aa13.1□□□□□ -0.31
CLP1-205ENST00000533682 AGPAT3Q9NRZ7 376 aa13.1□□□□□ -0.31
CLP1-205ENST00000533682 CEP72Q9P209 647 aa13.1□□□□□ -0.31
CLP1-205ENST00000533682 FAM184BQ9ULE4 1060 aa13.1□□□□□ -0.31
CLP1-205ENST00000533682 ODF2LQ9ULJ1 636 aa13.1□□□□□ -0.31
CLP1-205ENST00000533682 IRF6O14896 467 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 EIF3DO15371 548 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLP1-205ENST00000533682 SRGAP2O75044 1071 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 AFPP02771 609 aaKnown RBP13.09□□□□□ -0.31
CLP1-205ENST00000533682 PNMA6AP0CW24 399 aaPredicted RBP13.09□□□□□ -0.31
CLP1-205ENST00000533682 PON1P27169 355 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 ASTE1Q2TB18 679 aaPredicted RBP13.09□□□□□ -0.31
CLP1-205ENST00000533682 TDRD12Q587J7 1177 aaKnown RBP13.09□□□□□ -0.31
CLP1-205ENST00000533682 ANO5Q75V66 913 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 DNAAF5Q86Y56 855 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 NAPGQ99747 312 aaPredicted RBP13.09□□□□□ -0.31
CLP1-205ENST00000533682 IFIH1Q9BYX4 1025 aaKnown RBP13.09□□□□□ -0.31
CLP1-205ENST00000533682 GANQ9H2C0 597 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 BTBD7Q9P203 1132 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 SALL4Q9UJQ4 1053 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 PCDHA13Q9Y5I0 950 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 LCTP09848 1927 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 K7ENM7 598 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 ZNF862O60290 1169 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 ATP1A1P05023 1023 aaKnown RBP13.09□□□□□ -0.31
CLP1-205ENST00000533682 FDX1P10109 184 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 EPB41P11171 864 aaKnown RBP13.09□□□□□ -0.31
CLP1-205ENST00000533682 RPL13P26373 211 aaKnown RBP13.09□□□□□ -0.31
CLP1-205ENST00000533682 CCND2P30279 289 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 SP2Q02086 613 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 RAPGEF1Q13905 1077 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 NOL9Q5SY16 702 aaKnown RBP13.09□□□□□ -0.31
CLP1-205ENST00000533682 TEX35Q5T0J7 233 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 NSUN6Q8TEA1 469 aaKnown RBP13.09□□□□□ -0.31
CLP1-205ENST00000533682 INPP4AQ96PE3 977 aaPredicted RBP13.09□□□□□ -0.31
CLP1-205ENST00000533682 KIFC3Q9BVG8 833 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 STRA6Q9BX79 667 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 GBP3Q9H0R5 595 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 ELP3Q9H9T3 547 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 MLXIPQ9HAP2 919 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 ADARB2Q9NS39 739 aaKnown RBP13.09□□□□□ -0.31
CLP1-205ENST00000533682 HOXC10Q9NYD6 342 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 DDX41Q9UJV9 622 aaKnown RBP13.09□□□□□ -0.31
CLP1-205ENST00000533682 CDC23Q9UJX2 597 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 FHOD1Q9Y613 1164 aa13.09□□□□□ -0.31
CLP1-205ENST00000533682 FAM170AA1A519 330 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 WDR64B1ANS9 1081 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 PPP1R37O75864 691 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 IPO7O95373 1038 aaKnown RBP13.08□□□□□ -0.32
CLP1-205ENST00000533682 TRIM49P0CI25 452 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 TRIM49CP0CI26 452 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 KCNA2P16389 499 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 SPA17Q15506 151 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 TERF2Q15554 542 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 EXOC3L4Q17RC7 722 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 XKR9Q5GH70 373 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 SFMBT2Q5VUG0 894 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 NLRX1Q86UT6 975 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 SULF1Q8IWU6 871 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 FAM186BQ8IYM0 893 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 SYCP3Q8IZU3 236 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 NEK9Q8TD19 979 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 DCPSQ96C86 337 aaKnown RBP13.08□□□□□ -0.32
CLP1-205ENST00000533682 OTUD5Q96G74 571 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 SYT17Q9BSW7 474 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 ACAD9Q9H845 621 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 KCND2Q9NZV8 630 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 SEL1LQ9UBV2 794 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 TCEAL9Q9UHQ7 104 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 PPP2R3BQ9Y5P8 575 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 WDR90Q96KV7 1748 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 LOXHD1Q8IVV2 1947 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 EFCAB8A8MWE9 144 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 TULP2O00295 520 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 SLC16A4O15374 487 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 LRRN2O75325 713 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 UCHL3P15374 230 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 VAV2P52735 878 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 PEX3P56589 373 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 SWSAP1Q6NVH7 229 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 RBM46Q8TBY0 533 aaKnown RBP13.08□□□□□ -0.32
CLP1-205ENST00000533682 ZNF446Q9NWS9 450 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 GABBR1Q9UBS5 961 aa13.08□□□□□ -0.32
CLP1-205ENST00000533682 DBR1Q9UK59 544 aaKnown RBP13.08□□□□□ -0.32
CLP1-205ENST00000533682 KRT86O43790 486 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 PSMC2P35998 433 aaKnown RBP13.07□□□□□ -0.32
CLP1-205ENST00000533682 OAZ1P54368 228 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 PSMC5P62195 406 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 AMPD2Q01433 879 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 KIF5AQ12840 1032 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 CBWD6Q4V339 395 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 CBWD3Q5JTY5 395 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 CBWD5Q5RIA9 395 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 FAM102BQ5T8I3 360 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms