RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 TADA2BQ86TJ2 420 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 SYT2Q8N9I0 419 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-236ENST00000533667 AIFM3Q96NN9 605 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 HINFPQ9BQA5 517 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 MSTO1Q9BUK6 570 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 COX16Q9P0S2 106 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 GDAQ9Y2T3 454 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 MMEP08473 750 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 PAMP19021 973 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 PRELPP51888 382 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 GRM4Q14833 912 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 UBE2SQ16763 222 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 SPOPLQ6IQ16 392 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 SGMS1Q86VZ5 419 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 ST13P4Q8IZP2 240 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-236ENST00000533667 GIPC2Q8TF65 315 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 CENPKQ9BS16 269 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 BCS1LQ9Y276 419 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 HECW2Q9P2P5 1572 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 USP17L3A6NCW0 530 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 USP17L4A6NCW7 530 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 CTIFO43310 598 aaKnown RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 GDF11O95390 407 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 TBXAS1P24557 533 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 NFKBIAP25963 317 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 INPP1P49441 399 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 HNRNPH2P55795 449 aaKnown RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 UBXN2AP68543 259 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 KCNB1Q14721 858 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 E2F5Q15329 346 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 MTERF2Q49AM1 385 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 ACBD5Q5T8D3 534 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 RC3H1Q5TC82 1133 aaKnown RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 KRT80Q6KB66 452 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 PDXDC2PQ6P474 469 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 USP17L1Q7RTZ2 530 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 ABI1Q8IZP0 508 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 DYNLL2Q96FJ2 89 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 TRAIPQ9BWF2 469 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 BATF3Q9NR55 127 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 CYP26B1Q9NR63 512 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 ADAM22Q9P0K1 906 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 NXF1Q9UBU9 619 aaKnown RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 MYO3BQ8WXR4 1341 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 PRR36Q9H6K5 1346 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 A0A087WWV3 80 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 PRAMEF22A3QJZ6 481 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 KPNA7A9QM74 516 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 ASNSP08243 561 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 PSMA2P25787 234 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 DYNLT1P63172 113 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 MDM2Q00987 491 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 KRT76Q01546 638 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 SLC7A5Q01650 507 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 ZNF667Q5HYK9 610 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 TEDDM1Q5T9Z0 273 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 TRIM72Q6ZMU5 477 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 MCUQ8NE86 351 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 CCDC138Q96M89 665 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 ATP6V0A4Q9HBG4 840 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 ASNSD1Q9NWL6 643 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 CNOT8Q9UFF9 292 aaKnown RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 FBXO40Q9UH90 709 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 TBK1Q9UHD2 729 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 ADGRG1Q9Y653 693 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 MED14O60244 1454 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 KDM6BO15054 1643 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 LRRC53A6NM62 1247 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 COPEO14579 308 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 GSTA4O15217 222 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 XPAP23025 273 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 SFNP31947 248 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 MKRN3Q13064 507 aaKnown RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 NAALADL2Q58DX5 795 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 CCDC80Q76M96 950 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 TBC1D10CQ8IV04 446 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 GRAMD1AQ96CP6 724 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 HEXIM2Q96MH2 286 aaKnown RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.5□□□□□ -1.214e-16■□□□□ 9.4
CTNND1-236ENST00000533667 BEGAINQ9BUH8 593 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 GCOM2Q9BZD3 368 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 LY9Q9HBG7 655 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 PCDHA6Q9UN73 950 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 PCDHA8Q9Y5H6 950 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 FAM170AA1A519 330 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 RPSAP08865 295 aaKnown RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 ZSCAN20P17040 1043 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 KNOP1Q1ED39 458 aaKnown RBP7.5□□□□□ -1.21
CTNND1-236ENST00000533667 OSBPL9Q96SU4 736 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 WNT8AQ9H1J5 351 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 GINM1Q9NU53 330 aa7.5□□□□□ -1.21
CTNND1-236ENST00000533667 ABCB11O95342 1321 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 MAP3K4Q9Y6R4 1608 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 WDR64B1ANS9 1081 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 SORBS3O60504 671 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 SPAG7O75391 227 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 MX2P20592 715 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 PRCPP42785 496 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 PAPOLAP51003 745 aaKnown RBP7.49□□□□□ -1.21
CTNND1-236ENST00000533667 PPP2R2AP63151 447 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms