RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 THNSL2Q86YJ6 484 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 CHAC2Q8WUX2 184 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 USP7Q93009 1102 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 GPR101Q96P66 508 aaPredicted RBP3.87□□□□□ -1.79
ATM-220ENST00000533526 TTC1Q99614 292 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 ADAM7Q9H2U9 754 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 SEC61A2Q9H9S3 476 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 KCNG1Q9UIX4 513 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 SYNPO2Q9UMS6 1093 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 VWA7Q9Y334 891 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 DUSP10Q9Y6W6 482 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 ZNF536O15090 1300 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 CADPSQ9ULU8 1353 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 PRICKLE3O43900 615 aaPredicted RBP3.86□□□□□ -1.79
ATM-220ENST00000533526 RAB11FIP3O75154 756 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 CELA3BP08861 270 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 ADCY8P40145 1251 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 MEOX1P50221 254 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 KCNQ1P51787 676 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 EPHB4P54760 987 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 PHC1P78364 1004 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 SMAD3P84022 425 aaKnown RBP3.86□□□□□ -1.79
ATM-220ENST00000533526 PLP2Q04941 152 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 SEPT7Q16181 437 aaKnown RBP3.86□□□□□ -1.79
ATM-220ENST00000533526 TBC1D10BQ4KMP7 808 aaPredicted RBP3.86□□□□□ -1.79
ATM-220ENST00000533526 CT47A1Q5JQC4 288 aaPredicted RBP3.86□□□□□ -1.79
ATM-220ENST00000533526 PRAMEF9Q5VWM5 478 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 SLFN13Q68D06 897 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 TRIM68Q6AZZ1 485 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 GLB1LQ6UWU2 654 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 KRT26Q7Z3Y9 468 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 C7orf31Q8N865 590 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 ZNF610Q8N9Z0 462 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 LPPQ93052 612 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 IFT22Q9H7X7 185 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 MSL2Q9HCI7 577 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 JADE2Q9NQC1 790 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 SPTLC3Q9NUV7 552 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 KCMF1Q9P0J7 381 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 H2AFY2Q9P0M6 372 aaPredicted RBP3.86□□□□□ -1.79
ATM-220ENST00000533526 SAE1Q9UBE0 346 aaPredicted RBP3.86□□□□□ -1.79
ATM-220ENST00000533526 SLC4A7Q9Y6M7 1214 aa3.86□□□□□ -1.79
ATM-220ENST00000533526 NPEPPSL1A6NEC2 478 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 BRINP1O60477 761 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 H2AFYO75367 372 aaKnown RBP3.85□□□□□ -1.79
ATM-220ENST00000533526 ULK1O75385 1050 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 PRPF6O94906 941 aaKnown RBP3.85□□□□□ -1.79
ATM-220ENST00000533526 ITGB3P05106 788 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 BPIP17213 487 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 ADCYAP1R1P41586 468 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 RGS3P49796 1198 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 ADCY2Q08462 1091 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 FAPQ12884 760 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 DGKDQ16760 1214 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 ZNF827Q17R98 1081 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 SKOR2Q2VWA4 1001 aaPredicted RBP3.85□□□□□ -1.79
ATM-220ENST00000533526 ATP13A4Q4VNC1 1196 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 FRMD7Q6ZUT3 714 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 ESPNLQ6ZVH7 1005 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 USP30Q70CQ3 517 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 KANSL1Q7Z3B3 1105 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 BMP8AQ7Z5Y6 402 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 RTKN2Q8IZC4 609 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 GFM2Q969S9 779 aaKnown RBP3.85□□□□□ -1.79
ATM-220ENST00000533526 ZMAT4Q9H898 229 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 EMC7Q9NPA0 242 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 CDC42EP3Q9UKI2 254 aa3.85□□□□□ -1.79
ATM-220ENST00000533526 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.84□□□□□ -1.79
ATM-220ENST00000533526 TGM5O43548 720 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 VIL1P09327 827 aaKnown RBP3.84□□□□□ -1.79
ATM-220ENST00000533526 ZNF888P0CJ79 500 aaPredicted RBP3.84□□□□□ -1.79
ATM-220ENST00000533526 RAC3P60763 192 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 NFYCQ13952 458 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 NOLC1Q14978 699 aaKnown RBP eCLIP3.84□□□□□ -1.79
ATM-220ENST00000533526 PCOLCEQ15113 449 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 TERF2Q15554 542 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 MAN2A1Q16706 1144 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 RNF187Q5TA31 235 aaPredicted RBP3.84□□□□□ -1.79
ATM-220ENST00000533526 KIAA1841Q6NSI8 718 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 ESRP1Q6NXG1 681 aaKnown RBP3.84□□□□□ -1.79
ATM-220ENST00000533526 KLHDC10Q6PID8 442 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 GPR155Q7Z3F1 870 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 RASSF3Q86WH2 238 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 RSAD2Q8WXG1 361 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 RTF1Q92541 710 aaKnown RBP3.84□□□□□ -1.79
ATM-220ENST00000533526 SAMD11Q96NU1 681 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 RBM15Q96T37 977 aaKnown RBP eCLIP3.84□□□□□ -1.79
ATM-220ENST00000533526 BDH2Q9BUT1 245 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 WNT8AQ9H1J5 351 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 OR10A2Q9H208 303 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 SPC25Q9HBM1 224 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 MSRAQ9UJ68 235 aa3.84□□□□□ -1.79
ATM-220ENST00000533526 NOC2LQ9Y3T9 749 aaKnown RBP3.84□□□□□ -1.79
ATM-220ENST00000533526 A0A0A6YYJ9 748 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 ST20-MTHFSA0A0A6YYL1 179 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 PMS2P1A4D2B8 440 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 K7ESM1 405 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 ARHGAP6O43182 974 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 DAPK3O43293 454 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 CANXP27824 592 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms