RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 IREB2P48200 963 aaKnown RBP13.43□□□□□ -0.26
RAD50-209ENST00000533482 PDXDC1Q6P996 788 aa13.43□□□□□ -0.26
RAD50-209ENST00000533482 CACNA2D3Q8IZS8 1091 aa13.43□□□□□ -0.26
RAD50-209ENST00000533482 DENND3A2RUS2 1198 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 PALM3A6NDB9 673 aaPredicted RBP13.42□□□□□ -0.26
RAD50-209ENST00000533482 PSAPP07602 524 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 BMP6P22004 513 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 ATP5DP30049 168 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 QARSP47897 775 aaKnown RBP13.42□□□□□ -0.26
RAD50-209ENST00000533482 USP11P51784 963 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 PMS1P54277 932 aaKnown RBP13.42□□□□□ -0.26
RAD50-209ENST00000533482 FBXL16Q8N461 479 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 CCDC89Q8N998 374 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 CDHR1Q96JP9 859 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 DDX4Q9NQI0 724 aaKnown RBP13.42□□□□□ -0.26
RAD50-209ENST00000533482 RNF14Q9UBS8 474 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 WDR64B1ANS9 1081 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 ZC2HC1CQ53FD0 456 aaPredicted RBP13.42□□□□□ -0.26
RAD50-209ENST00000533482 NAALADL2Q58DX5 795 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 HHATQ5VTY9 493 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 ZFPM1Q8IX07 1006 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 C7orf31Q8N865 590 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 FAM213AQ9BRX8 229 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 NYAP2Q9P242 653 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 TBK1Q9UHD2 729 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 SSTR3P32745 418 aaPredicted RBP13.42□□□□□ -0.26
RAD50-209ENST00000533482 ARHGAP25P42331 645 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 ZKSCAN8Q15776 578 aaPredicted RBP13.42□□□□□ -0.26
RAD50-209ENST00000533482 SGO2Q562F6 1265 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 NSUN6Q8TEA1 469 aaKnown RBP13.42□□□□□ -0.26
RAD50-209ENST00000533482 IL17RAQ96F46 866 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 L2HGDHQ9H9P8 463 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 TYW1Q9NV66 732 aaKnown RBP13.42□□□□□ -0.26
RAD50-209ENST00000533482 PCDHAC2Q9Y5I4 1007 aa13.42□□□□□ -0.26
RAD50-209ENST00000533482 POC1B-GALNT4F8VUJ3 575 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 PPFIA4O75335 1185 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 PBKQ96KB5 322 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 REEP2Q9BRK0 252 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 LACRTQ9GZZ8 138 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 ARL1P40616 181 aaPredicted RBP13.41□□□□□ -0.26
RAD50-209ENST00000533482 GMPSP49915 693 aaPredicted RBP13.41□□□□□ -0.26
RAD50-209ENST00000533482 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
RAD50-209ENST00000533482 PPP2R5EQ16537 467 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 PPP1R18Q6NYC8 613 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 PASD1Q8IV76 773 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.41□□□□□ -0.26
RAD50-209ENST00000533482 RAB20Q9NX57 234 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 PARP2Q9UGN5 583 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 KCNG1Q9UIX4 513 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 SNX12Q9UMY4 172 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 GKAP1Q5VSY0 366 aaPredicted RBP13.41□□□□□ -0.26
RAD50-209ENST00000533482 DEFB129Q9H1M3 183 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 GGA3Q9NZ52 723 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.41□□□□□ -0.26
RAD50-209ENST00000533482 MYBP10242 640 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 NR1D1P20393 614 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 DYNLT1P63172 113 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 PPP2R5AQ15172 486 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 TAF12Q16514 161 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 NBPF9Q3BBW0 867 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 CASC4Q6P4E1 433 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 EMBQ6PCB8 327 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 ZKSCAN4Q969J2 545 aaPredicted RBP13.41□□□□□ -0.26
RAD50-209ENST00000533482 FMO2Q99518 471 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 VCPKMTQ9H867 229 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 PNMA2Q9UL42 364 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 STK38LQ9Y2H1 464 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 CD2APQ9Y5K6 639 aa13.41□□□□□ -0.26
RAD50-209ENST00000533482 PASKQ96RG2 1323 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 CTNND1O60716 968 aaKnown RBP13.4□□□□□ -0.26
RAD50-209ENST00000533482 HIP1RO75146 1068 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 P4HBP07237 508 aaKnown RBP13.4□□□□□ -0.26
RAD50-209ENST00000533482 ATF2P15336 505 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 STXBP2Q15833 593 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 XXYLT1Q8NBI6 393 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 FAM151AQ8WW52 585 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 MSTO1Q9BUK6 570 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 HEMGNQ9BXL5 484 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 INTS9Q9NV88 658 aaKnown RBP13.4□□□□□ -0.26
RAD50-209ENST00000533482 HOXC10Q9NYD6 342 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.4□□□□□ -0.26
RAD50-209ENST00000533482 PLAAQ9Y263 795 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 FAM169AQ9Y6X4 670 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 H0YCG3 227 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 M0QZ92 97 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 POLRMTO00411 1230 aaKnown RBP13.4□□□□□ -0.26
RAD50-209ENST00000533482 ZNF18P17022 549 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 ZSCAN20P17040 1043 aaPredicted RBP13.4□□□□□ -0.26
RAD50-209ENST00000533482 ALDH3A1P30838 453 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 DR1Q01658 176 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.4□□□□□ -0.26
RAD50-209ENST00000533482 NLRP7Q8WX94 980 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 PLCB1Q9NQ66 1216 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 HOMER3Q9NSC5 361 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 ITIH6Q6UXX5 1313 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 ENTPD3O75355 529 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 APBB1IPQ7Z5R6 666 aaPredicted RBP13.4□□□□□ -0.26
RAD50-209ENST00000533482 CCDC13Q8IYE1 715 aa13.4□□□□□ -0.26
RAD50-209ENST00000533482 RSAD2Q8WXG1 361 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms