RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 ERICH1Q86X53 443 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 ANAPC7Q9UJX3 599 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 CEP170BQ9Y4F5 1589 aaPredicted RBP18.9■□□□□ 0.62
PHRF1-205ENST00000533464 AGLP35573 1532 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 RASGRF2O14827 1237 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 CHRNA5P30532 468 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 CC2D1AQ6P1N0 951 aaPredicted RBP18.9■□□□□ 0.62
PHRF1-205ENST00000533464 RNF10Q8N5U6 811 aaKnown RBP18.9■□□□□ 0.62
PHRF1-205ENST00000533464 KIDINS220Q9ULH0 1771 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 CLTAP09496 248 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 CLNS1AP54105 237 aaKnown RBP18.9■□□□□ 0.62
PHRF1-205ENST00000533464 DPYDQ12882 1025 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 VPS72Q15906 364 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 EPC1Q9H2F5 836 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 SLC38A10Q9HBR0 1119 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 FBXO40Q9UH90 709 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 RASA1P20936 1047 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 DRAP1Q14919 205 aaPredicted RBP18.9■□□□□ 0.62
PHRF1-205ENST00000533464 TMED2Q15363 201 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 NFRKBQ6P4R8 1299 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 SLC10A4Q96EP9 437 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 DNAJC17Q9NVM6 304 aaKnown RBP18.9■□□□□ 0.62
PHRF1-205ENST00000533464 RGL1Q9NZL6 768 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 GABBR1Q9UBS5 961 aa18.9■□□□□ 0.62
PHRF1-205ENST00000533464 NR1D1P20393 614 aa18.89■□□□□ 0.62
PHRF1-205ENST00000533464 DARS2Q6PI48 645 aaKnown RBP18.89■□□□□ 0.62
PHRF1-205ENST00000533464 LDHDQ86WU2 507 aa18.89■□□□□ 0.62
PHRF1-205ENST00000533464 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.89■□□□□ 0.62
PHRF1-205ENST00000533464 VCX3BQ9H321 246 aa18.89■□□□□ 0.62
PHRF1-205ENST00000533464 ARHGAP42A6NI28 874 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 ACTN1P12814 892 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 VAMP7P51809 220 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 GLE1Q53GS7 698 aaKnown RBP18.89■□□□□ 0.61
PHRF1-205ENST00000533464 SWSAP1Q6NVH7 229 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 ADSSL1Q8N142 457 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 WDR24Q96S15 920 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 ZMYND12Q9H0C1 365 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 CAPN11Q9UMQ6 739 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 TECPR2O15040 1411 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 A0A1B0GTH6 734 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 MIF4GDA9UHW6 222 aaKnown RBP18.89■□□□□ 0.61
PHRF1-205ENST00000533464 NCK2O43639 380 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 PRPSAP2O60256 369 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 GPC5P78333 572 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 CEP55Q53EZ4 464 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 SCYL1Q96KG9 808 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 FAM49AQ9H0Q0 323 aaPredicted RBP18.89■□□□□ 0.61
PHRF1-205ENST00000533464 KIAA1586Q9HCI6 787 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 LIMA1Q9UHB6 759 aaKnown RBP18.89■□□□□ 0.61
PHRF1-205ENST00000533464 SNX24Q9Y343 169 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 TRIM49P0CI25 452 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 TRIM49CP0CI26 452 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 SFNP31947 248 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 MAPK6Q16659 721 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 ZNF667Q5HYK9 610 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 RPUSD2Q8IZ73 545 aaKnown RBP18.89■□□□□ 0.61
PHRF1-205ENST00000533464 IRX2Q9BZI1 471 aaPredicted RBP18.89■□□□□ 0.61
PHRF1-205ENST00000533464 LRRC4Q9HBW1 653 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 SCINQ9Y6U3 715 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 IQGAP1P46940 1657 aa18.89■□□□□ 0.61
PHRF1-205ENST00000533464 ZBTB7AO95365 584 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 ARL4AP40617 200 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 GYS2P54840 703 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 OSBPL9Q96SU4 736 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 BEGAINQ9BUH8 593 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 EFCC1Q9HA90 598 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 KIAA1210Q9ULL0 1709 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 MSH2P43246 934 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 DMTNQ08495 405 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 NXNQ6DKJ4 435 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 TCP11Q8WWU5 503 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 RAB3IPQ96QF0 476 aaPredicted RBP18.88■□□□□ 0.61
PHRF1-205ENST00000533464 NDUFB10O96000 172 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 STRIP1Q5VSL9 837 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 E4F1Q66K89 784 aaPredicted RBP18.88■□□□□ 0.61
PHRF1-205ENST00000533464 CCHCR1Q8TD31 782 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 CFAP57Q96MR6 1250 aa18.88■□□□□ 0.61
PHRF1-205ENST00000533464 HIP1RO75146 1068 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 PSMC5P62195 406 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 CCZ1BP86790 482 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 CCZ1P86791 482 aaPredicted RBP18.87■□□□□ 0.61
PHRF1-205ENST00000533464 STK4Q13043 487 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 RPS6KA2Q15349 733 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 TMEM270Q6UE05 265 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 EIF3BP55884 814 aaKnown RBP18.87■□□□□ 0.61
PHRF1-205ENST00000533464 BBS9Q3SYG4 887 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 CCDC38Q502W7 563 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 ZNF746Q6NUN9 644 aaPredicted RBP18.87■□□□□ 0.61
PHRF1-205ENST00000533464 ARHGEF18Q6ZSZ5 1173 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 C16orf86Q6ZW13 317 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 PASD1Q8IV76 773 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 SAAL1Q96ER3 474 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 TACC3Q9Y6A5 838 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 ZRANB2O95218 330 aaKnown RBP eCLIP18.87■□□□□ 0.613e-6■■■■□ 25.7
PHRF1-205ENST00000533464 ACSL3O95573 720 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 EYA4O95677 639 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 CPP00450 1065 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 GARSP41250 739 aaKnown RBP18.87■□□□□ 0.61
PHRF1-205ENST00000533464 GSDMBQ8TAX9 411 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 CHP1Q99653 195 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms