RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TANC1Q9C0D5 1861 aa13.38□□□□□ -0.27
SSBP3-214ENST00000533209 A0A1W2PPC1 479 aa13.38□□□□□ -0.27
SSBP3-214ENST00000533209 FGBP02675 491 aa13.38□□□□□ -0.27
SSBP3-214ENST00000533209 TMOD1P28289 359 aa13.38□□□□□ -0.27
SSBP3-214ENST00000533209 LONP1P36776 959 aaKnown RBP13.38□□□□□ -0.27
SSBP3-214ENST00000533209 RFC5P40937 340 aa13.38□□□□□ -0.27
SSBP3-214ENST00000533209 TCTN1Q2MV58 587 aa13.38□□□□□ -0.27
SSBP3-214ENST00000533209 PSRC1Q6PGN9 363 aaPredicted RBP13.38□□□□□ -0.27
SSBP3-214ENST00000533209 LINC00301Q8NCQ3 95 aa13.38□□□□□ -0.27
SSBP3-214ENST00000533209 AK8Q96MA6 479 aa13.38□□□□□ -0.27
SSBP3-214ENST00000533209 MAP7D2Q96T17 732 aa13.38□□□□□ -0.27
SSBP3-214ENST00000533209 CELF4Q9BZC1 486 aaKnown RBP13.38□□□□□ -0.27
SSBP3-214ENST00000533209 SUGCTQ9HAC7 445 aa13.38□□□□□ -0.27
SSBP3-214ENST00000533209 CDHR5Q9HBB8 845 aa13.38□□□□□ -0.27
SSBP3-214ENST00000533209 DDX19AQ9NUU7 478 aaKnown RBP13.38□□□□□ -0.27
SSBP3-214ENST00000533209 DAXXQ9UER7 740 aaPredicted RBP13.38□□□□□ -0.27
SSBP3-214ENST00000533209 DBR1Q9UK59 544 aaKnown RBP13.38□□□□□ -0.27
SSBP3-214ENST00000533209 SRPRBQ9Y5M8 271 aaKnown RBP13.38□□□□□ -0.27
SSBP3-214ENST00000533209 TRPV2Q9Y5S1 764 aa13.38□□□□□ -0.27
SSBP3-214ENST00000533209 KDM3AQ9Y4C1 1321 aa13.38□□□□□ -0.27
SSBP3-214ENST00000533209 M0QZ92 97 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 GPR32O75388 356 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 YEATS4O95619 227 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 POLGP54098 1239 aaPredicted RBP13.37□□□□□ -0.27
SSBP3-214ENST00000533209 GRB10Q13322 594 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 LPIN1Q14693 890 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 EMC2Q15006 297 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 PLEKHG4Q58EX7 1191 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 FBXO47Q5MNV8 452 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 HYIQ5T013 277 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 RASIP1Q5U651 963 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 KCNK18Q7Z418 384 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 CABP7Q86V35 215 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 EXOC8Q8IYI6 725 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 SLC7A3Q8WY07 619 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 HERVK_113Q902F9 699 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 PNMA5Q96PV4 448 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 PPP1R16BQ96T49 567 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 JPH2Q9BR39 696 aaPredicted RBP13.37□□□□□ -0.27
SSBP3-214ENST00000533209 CSRNP2Q9H175 543 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 ADAMTS10Q9H324 1103 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 XPNPEP1Q9NQW7 623 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
SSBP3-214ENST00000533209 KIAA1024Q9UPX6 916 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 AKT3Q9Y243 479 aa13.37□□□□□ -0.27
SSBP3-214ENST00000533209 SCN5AQ14524 2016 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 SPTLC2O15270 562 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 GHRP10912 638 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 ANP32AP39687 249 aaKnown RBP13.36□□□□□ -0.27
SSBP3-214ENST00000533209 DNM2P50570 870 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 DNM1Q05193 864 aaKnown RBP13.36□□□□□ -0.27
SSBP3-214ENST00000533209 STK38Q15208 465 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 KIZQ2M2Z5 673 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 TMEM119Q4V9L6 283 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 ATL3Q6DD88 541 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 CNKSR3Q6P9H4 555 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 OTOP2Q7RTS6 562 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 DBF4BQ8NFT6 615 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 TMEM143Q96AN5 459 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 RNPC3Q96LT9 517 aaKnown RBP13.36□□□□□ -0.27
SSBP3-214ENST00000533209 CLIC6Q96NY7 704 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 AGO3Q9H9G7 860 aaKnown RBP13.36□□□□□ -0.27
SSBP3-214ENST00000533209 CXXC1Q9P0U4 656 aaPredicted RBP13.36□□□□□ -0.27
SSBP3-214ENST00000533209 SUCLA2Q9P2R7 463 aaPredicted RBP13.36□□□□□ -0.27
SSBP3-214ENST00000533209 SQORQ9Y6N5 450 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 TET1Q8NFU7 2136 aa13.36□□□□□ -0.27
SSBP3-214ENST00000533209 E9PMD0 336 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 SLC26A4O43511 780 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 GAS2O43903 313 aaKnown RBP13.35□□□□□ -0.27
SSBP3-214ENST00000533209 USO1O60763 962 aaKnown RBP13.35□□□□□ -0.27
SSBP3-214ENST00000533209 PPP6R2O75170 966 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 DGAT1O75907 488 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 EYA4O95677 639 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 ACTN1P12814 892 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 UBA7P41226 1012 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 GPC3P51654 580 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 CRYBB1P53674 252 aaPredicted RBP13.35□□□□□ -0.27
SSBP3-214ENST00000533209 NLRP11P59045 1033 aaKnown RBP13.35□□□□□ -0.27
SSBP3-214ENST00000533209 ZRSR1Q15695 479 aaKnown RBP13.35□□□□□ -0.27
SSBP3-214ENST00000533209 HABP4Q5JVS0 413 aaKnown RBP13.35□□□□□ -0.27
SSBP3-214ENST00000533209 SPECC1Q5M775 1068 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 TSHZ1Q6ZSZ6 1077 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 USP49Q70CQ1 688 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 ZNF710Q8N1W2 664 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 KRI1Q8N9T8 703 aaKnown RBP13.35□□□□□ -0.27
SSBP3-214ENST00000533209 TMEM40Q8WWA1 233 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 EPSTI1Q96J88 318 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 CHAMP1Q96JM3 812 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 ZNF668Q96K58 619 aaPredicted RBP13.35□□□□□ -0.27
SSBP3-214ENST00000533209 CCDC43Q96MW1 224 aaKnown RBP13.35□□□□□ -0.27
SSBP3-214ENST00000533209 PLIN2Q99541 437 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 MTRQ99707 1265 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 NT5C3AQ9H0P0 336 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 BHMT2Q9H2M3 363 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 ATP6V0A4Q9HBG4 840 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 DNM3Q9UQ16 869 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 GINS2Q9Y248 185 aa13.35□□□□□ -0.27
SSBP3-214ENST00000533209 LAMA2P24043 3122 aaKnown RBP13.35□□□□□ -0.27
SSBP3-214ENST00000533209 ARHGEF35A5YM69 484 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 BAIAP3O94812 1187 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms