RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 TSC22D2O75157 780 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 CYP11A1P05108 521 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 RHOXF2BP0C7M4 288 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 TUBP50607 506 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 PAPOLAP51003 745 aaKnown RBP7.47□□□□□ -1.21
BDNF-217ENST00000533131 INAQ16352 499 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 HS1BP3Q53T59 392 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 FAM178BQ8IXR5 827 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 SYNPOQ8N3V7 929 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 DRAXINQ8NBI3 349 aaPredicted RBP7.47□□□□□ -1.21
BDNF-217ENST00000533131 ANKRD20A12PQ8NF67 263 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 TGFBRAP1Q8WUH2 860 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 RAPGEF4Q8WZA2 1011 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 TMEM237Q96Q45 408 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 ACO2Q99798 780 aaKnown RBP7.47□□□□□ -1.21
BDNF-217ENST00000533131 RHOXF2Q9BQY4 288 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 LGR4Q9BXB1 951 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 SLC13A1Q9BZW2 595 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 PUS7LQ9H0K6 701 aaKnown RBP7.47□□□□□ -1.21
BDNF-217ENST00000533131 CCDC177Q9NQR7 707 aaPredicted RBP7.47□□□□□ -1.21
BDNF-217ENST00000533131 VPS28Q9UK41 221 aa7.47□□□□□ -1.21
BDNF-217ENST00000533131 A8MV72 311 aaPredicted RBP7.46□□□□□ -1.21
BDNF-217ENST00000533131 TISP43B9A030 160 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 B9A039 149 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 CASQ2O14958 399 aaPredicted RBP7.46□□□□□ -1.21
BDNF-217ENST00000533131 TBCAO75347 108 aaKnown RBP7.46□□□□□ -1.21
BDNF-217ENST00000533131 PCP11498 1178 aaKnown RBP7.46□□□□□ -1.21
BDNF-217ENST00000533131 AFF3P51826 1226 aaKnown RBP7.46□□□□□ -1.21
BDNF-217ENST00000533131 HSPA2P54652 639 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 ICA1Q05084 483 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 ZNF252P-AS1Q0IIN9 211 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 SV2CQ496J9 727 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 PLEKHO1Q53GL0 409 aaPredicted RBP7.46□□□□□ -1.21
BDNF-217ENST00000533131 CREB3L3Q68CJ9 461 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 OTUD7BQ6GQQ9 843 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 TRAF7Q6Q0C0 670 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 ANKRD35Q8N283 1001 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 IL17REQ8NFR9 667 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 KRT35Q92764 455 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 FUBP3Q96I24 572 aaKnown RBP eCLIP7.46□□□□□ -1.21
BDNF-217ENST00000533131 TRIM47Q96LD4 638 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 RIPOR3Q96MK2 946 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 TMEM74Q96NL1 305 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 NOL10Q9BSC4 688 aaKnown RBP7.46□□□□□ -1.21
BDNF-217ENST00000533131 RSAD1Q9HA92 442 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 HPCAL4Q9UM19 191 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 POLHQ9Y253 713 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 USP20Q9Y2K6 914 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 JRKLQ9Y4A0 524 aa7.46□□□□□ -1.21
BDNF-217ENST00000533131 E9PCH4 1651 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 DOK2O60496 412 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 HSD3B1P14060 373 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 MAPK3P27361 379 aaPredicted RBP7.46□□□□□ -1.22
BDNF-217ENST00000533131 SOX9P48436 509 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 TPM4P67936 248 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 PWP1Q13610 501 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 ME3Q16798 604 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 ZNF674Q2M3X9 581 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 ODF2Q5BJF6 829 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 FAM26DQ5JW98 314 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 MRM1Q6IN84 353 aaKnown RBP7.46□□□□□ -1.22
BDNF-217ENST00000533131 SYDE1Q6ZW31 735 aaPredicted RBP7.46□□□□□ -1.22
BDNF-217ENST00000533131 UBE3BQ7Z3V4 1068 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 GOT1L1Q8NHS2 421 aaPredicted RBP7.46□□□□□ -1.22
BDNF-217ENST00000533131 DIS3LQ8TF46 1054 aaKnown RBP7.46□□□□□ -1.22
BDNF-217ENST00000533131 INTS4Q96HW7 963 aaKnown RBP7.46□□□□□ -1.22
BDNF-217ENST00000533131 FAM204AQ9H8W3 233 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 BCL2L12Q9HB09 334 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 C11orf16Q9NQ32 467 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 TRMT13Q9NUP7 481 aaKnown RBP7.46□□□□□ -1.22
BDNF-217ENST00000533131 IQGAP3Q86VI3 1631 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 UNC13BO14795 1591 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 LOC102724428A0A0B4J2F2 783 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 EYA2O00167 538 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 CEP104O60308 925 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 TRIM21P19474 475 aaKnown RBP7.46□□□□□ -1.22
BDNF-217ENST00000533131 SIK1P57059 783 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 NECAB2Q7Z6G3 386 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 PTRH1Q86Y79 214 aaKnown RBP7.46□□□□□ -1.22
BDNF-217ENST00000533131 CCDC144CPQ8IYA2 1237 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 ARHGAP9Q9BRR9 750 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 KRT23Q9C075 422 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 PDLIM7Q9NR12 457 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 DDX18Q9NVP1 670 aaKnown RBP7.46□□□□□ -1.22
BDNF-217ENST00000533131 USP16Q9Y5T5 823 aa7.46□□□□□ -1.22
BDNF-217ENST00000533131 ZMYM3Q14202 1370 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 PIK3C2BO00750 1634 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 C17orf113A0A1B0GUU1 675 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 MEN1O00255 615 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 NCK2O43639 380 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 TADA3O75528 432 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 EPS15P42566 896 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 GRK6P43250 576 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 COASYQ13057 564 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 IKQ13123 557 aaPredicted RBP7.45□□□□□ -1.22
BDNF-217ENST00000533131 ANGPTL8Q6UXH0 198 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 TMEM110Q86TL2 294 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 TRIM74Q86UV6 250 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 TRIM73Q86UV7 250 aa7.45□□□□□ -1.22
BDNF-217ENST00000533131 FSIP1Q8NA03 581 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms