RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 P4HBP07237 508 aaKnown RBP18.68■□□□□ 0.58
PKP3-209ENST00000533069 CDC42EP1Q00587 391 aa18.68■□□□□ 0.58
PKP3-209ENST00000533069 EPHA7Q15375 998 aa18.68■□□□□ 0.58
PKP3-209ENST00000533069 CALCRLQ16602 461 aa18.68■□□□□ 0.58
PKP3-209ENST00000533069 MTERF2Q49AM1 385 aa18.68■□□□□ 0.58
PKP3-209ENST00000533069 LRRC71Q8N4P6 559 aa18.68■□□□□ 0.58
PKP3-209ENST00000533069 FBXO18Q8NFZ0 1043 aa18.68■□□□□ 0.58
PKP3-209ENST00000533069 TMEM40Q8WWA1 233 aa18.68■□□□□ 0.58
PKP3-209ENST00000533069 LINC01599Q8WXQ3 324 aa18.68■□□□□ 0.58
PKP3-209ENST00000533069 OSMRQ99650 979 aa18.68■□□□□ 0.58
PKP3-209ENST00000533069 JPH2Q9BR39 696 aaPredicted RBP18.68■□□□□ 0.58
PKP3-209ENST00000533069 FOXP1Q9H334 677 aaPredicted RBP18.68■□□□□ 0.58
PKP3-209ENST00000533069 RNF216Q9NWF9 866 aaPredicted RBP18.68■□□□□ 0.58
PKP3-209ENST00000533069 NOC2LQ9Y3T9 749 aaKnown RBP18.68■□□□□ 0.58
PKP3-209ENST00000533069 DDX11L8A8MPP1 907 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 K7ELQ4 463 aaPredicted RBP18.67■□□□□ 0.58
PKP3-209ENST00000533069 RFXAPO00287 272 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 STAG3L1P0CL83 205 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 GUCY1B3Q02153 619 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 SPIRE1Q08AE8 756 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 NFX1Q12986 1120 aaKnown RBP18.67■□□□□ 0.58
PKP3-209ENST00000533069 GRB10Q13322 594 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 ORC2Q13416 577 aaPredicted RBP18.67■□□□□ 0.58
PKP3-209ENST00000533069 TMEM266Q2M3C6 531 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 ANO5Q75V66 913 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 SPRED2Q7Z698 418 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 NPAS4Q8IUM7 802 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 TMX1Q9H3N1 280 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 SUGCTQ9HAC7 445 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 CDHR5Q9HBB8 845 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 LMCD1Q9NZU5 365 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 MTUS1Q9ULD2 1270 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 KIF3AQ9Y496 699 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 MTCH2Q9Y6C9 303 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 ADGRA3Q8IWK6 1321 aa18.67■□□□□ 0.58
PKP3-209ENST00000533069 IGKV6-21A0A0C4DH24 114 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 MAFO75444 373 aaPredicted RBP18.66■□□□□ 0.58
PKP3-209ENST00000533069 DNM2P50570 870 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 NLRP11P59045 1033 aaKnown RBP18.66■□□□□ 0.58
PKP3-209ENST00000533069 NCAPH2Q6IBW4 605 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 C4orf19Q8IY42 314 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 EXOC8Q8IYI6 725 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 FBXO22Q8NEZ5 403 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 PPM1EQ8WY54 764 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 IPO9Q96P70 1041 aaKnown RBP18.66■□□□□ 0.58
PKP3-209ENST00000533069 CEP89Q96ST8 783 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 PPP1R16BQ96T49 567 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 LXNQ9BS40 222 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 C17orf80Q9BSJ5 609 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 ADAMTS10Q9H324 1103 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 RC3H2Q9HBD1 1191 aaKnown RBP18.66■□□□□ 0.58
PKP3-209ENST00000533069 C1orf112Q9NSG2 853 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 PCDHA12Q9UN75 941 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 ST3GAL5Q9UNP4 418 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 RWDD3Q9Y3V2 267 aa18.66■□□□□ 0.58
PKP3-209ENST00000533069 DENND3A2RUS2 1198 aa18.65■□□□□ 0.58
PKP3-209ENST00000533069 TMEM150BA6NC51 233 aa18.65■□□□□ 0.58
PKP3-209ENST00000533069 LPXNO60711 386 aa18.65■□□□□ 0.58
PKP3-209ENST00000533069 GNL2Q13823 731 aaKnown RBP18.65■□□□□ 0.58
PKP3-209ENST00000533069 RTN4RL1Q86UN2 441 aaPredicted RBP18.65■□□□□ 0.58
PKP3-209ENST00000533069 FAM228AQ86W67 206 aa18.65■□□□□ 0.58
PKP3-209ENST00000533069 CRIPAKQ8N1N5 446 aa18.65■□□□□ 0.58
PKP3-209ENST00000533069 FIBCD1Q8N539 461 aa18.65■□□□□ 0.58
PKP3-209ENST00000533069 NEK9Q8TD19 979 aa18.65■□□□□ 0.58
PKP3-209ENST00000533069 GDPD5Q8WTR4 605 aa18.65■□□□□ 0.58
PKP3-209ENST00000533069 ZSWIM4Q9H7M6 989 aa18.65■□□□□ 0.58
PKP3-209ENST00000533069 TTC12Q9H892 705 aaPredicted RBP18.65■□□□□ 0.58
PKP3-209ENST00000533069 CYP26B1Q9NR63 512 aa18.65■□□□□ 0.58
PKP3-209ENST00000533069 RGS18Q9NS28 235 aa18.65■□□□□ 0.58
PKP3-209ENST00000533069 DGKIO75912 1065 aa18.64■□□□□ 0.57
PKP3-209ENST00000533069 EIF4BP23588 611 aaKnown RBP18.64■□□□□ 0.57
PKP3-209ENST00000533069 SARSP49591 514 aaKnown RBP18.64■□□□□ 0.57
PKP3-209ENST00000533069 GPC3P51654 580 aa18.64■□□□□ 0.57
PKP3-209ENST00000533069 CCDC85BQ15834 202 aaPredicted RBP18.64■□□□□ 0.57
PKP3-209ENST00000533069 EPC2Q52LR7 807 aa18.64■□□□□ 0.57
PKP3-209ENST00000533069 OTUD6AQ7L8S5 288 aa18.64■□□□□ 0.57
PKP3-209ENST00000533069 NOSTRINQ8IVI9 506 aa18.64■□□□□ 0.57
PKP3-209ENST00000533069 MICALL1Q8N3F8 863 aa18.64■□□□□ 0.57
PKP3-209ENST00000533069 SLC7A3Q8WY07 619 aa18.64■□□□□ 0.57
PKP3-209ENST00000533069 ZNF689Q96CS4 500 aaPredicted RBP18.64■□□□□ 0.57
PKP3-209ENST00000533069 SCLT1Q96NL6 688 aa18.64■□□□□ 0.57
PKP3-209ENST00000533069 MTMR9Q96QG7 549 aa18.64■□□□□ 0.57
PKP3-209ENST00000533069 LRFN2Q9ULH4 789 aa18.64■□□□□ 0.57
PKP3-209ENST00000533069 UNC80Q8N2C7 3258 aa18.64■□□□□ 0.57
PKP3-209ENST00000533069 WNT7AO00755 349 aa18.63■□□□□ 0.57
PKP3-209ENST00000533069 DARSP14868 501 aaKnown RBP18.63■□□□□ 0.57
PKP3-209ENST00000533069 YWHABP31946 246 aaKnown RBP18.63■□□□□ 0.57
PKP3-209ENST00000533069 RFC5P40937 340 aa18.63■□□□□ 0.57
PKP3-209ENST00000533069 TXKP42681 527 aa18.63■□□□□ 0.57
PKP3-209ENST00000533069 TRAPPC10P48553 1259 aa18.63■□□□□ 0.57
PKP3-209ENST00000533069 BTG3Q14201 252 aaPredicted RBP18.63■□□□□ 0.57
PKP3-209ENST00000533069 PLA2G4FQ68DD2 849 aa18.63■□□□□ 0.57
PKP3-209ENST00000533069 SLC24A5Q71RS6 500 aa18.63■□□□□ 0.57
PKP3-209ENST00000533069 TMEM192Q8IY95 271 aa18.63■□□□□ 0.57
PKP3-209ENST00000533069 CMTR2Q8IYT2 770 aaKnown RBP18.63■□□□□ 0.57
PKP3-209ENST00000533069 NLRP7Q8WX94 980 aa18.63■□□□□ 0.57
PKP3-209ENST00000533069 DYDC2Q96IM9 177 aa18.63■□□□□ 0.57
PKP3-209ENST00000533069 CEP170P1Q96L14 293 aa18.63■□□□□ 0.57
PKP3-209ENST00000533069 ADAM2Q99965 735 aa18.63■□□□□ 0.57
PKP3-209ENST00000533069 SH2D3AQ9BRG2 576 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms