RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 SYNJ2BP-COX16A0A087WUM0 186 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 SYCE1LA8MT33 242 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 INO80B-WBP1J3KQ70 363 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 CLIC2O15247 247 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 ZRANB2O95218 330 aaKnown RBP eCLIP8.12□□□□□ -1.117e-11■■■■■ 70
CTNND1-233ENST00000532787 CXCR5P32302 372 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 AP3M2P53677 418 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 HP1BP3Q5SSJ5 553 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 CC2D2BQ6DHV5 1058 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 PARP9Q8IXQ6 854 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 MCPH1Q8NEM0 835 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 ATP6V1G3Q96LB4 118 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 PIGSQ96S52 555 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 TRIM62Q9BVG3 475 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 INO80BQ9C086 356 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 ING2Q9H160 280 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 TAF1DQ9H5J8 278 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 CHCHD3Q9NX63 227 aaKnown RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 COX16Q9P0S2 106 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 TRPC5Q9UL62 973 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 NCKAP5LQ9HCH0 1330 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 TMEM2Q9UHN6 1383 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 NCAPD2Q15021 1401 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 EFCAB14O75071 495 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 PALMO75781 387 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 KRT16P08779 473 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 ZSCAN20P17040 1043 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 SERPINB10P48595 397 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 TRADDQ15628 312 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 C1orf146Q5VVC0 180 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 LRIG3Q6UXM1 1119 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 NLRP14Q86W24 1093 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 MYLK4Q86YV6 388 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 APLFQ8IW19 511 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 NLGN1Q8N2Q7 840 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 TAB3Q8N5C8 712 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 ICA1LQ8NDH6 482 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 DCPSQ96C86 337 aaKnown RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 AP1M1Q9BXS5 423 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 GREM2Q9H772 168 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 SERPINB13Q9UIV8 391 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 MORC2Q9Y6X9 1032 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 SPDYE2BA6NHP3 402 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 PPEF1O14829 653 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 KRT7P08729 469 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 SPDYE6P0CI01 402 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 DYNLT1P63172 113 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 TFAMQ00059 246 aaKnown RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 RARS2Q5T160 578 aaKnown RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 TOGARAM2Q6ZUX3 1019 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 SMYD4Q8IYR2 804 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 RNF169Q8NCN4 708 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 ASPSCR1Q9BZE9 553 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 STX18Q9P2W9 335 aaKnown RBP8.12□□□□□ -1.11
CTNND1-233ENST00000532787 IP6K2Q9UHH9 426 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 IGSF1Q8N6C5 1336 aa8.12□□□□□ -1.11
CTNND1-233ENST00000532787 ADGRL3Q9HAR2 1447 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 RASSF10A6NK89 507 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 TCP10L2B9ZVM9 353 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 MED21Q13503 144 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 MORF4L2Q15014 288 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 KYAT1Q16773 422 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 CDKL3Q8IVW4 592 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-233ENST00000532787 TEX9Q8N6V9 391 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 SPDYE1Q8NFV5 336 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-233ENST00000532787 SNF8Q96H20 258 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 HEXIM2Q96MH2 286 aaKnown RBP8.11□□□□□ -1.11
CTNND1-233ENST00000532787 SNX2O60749 519 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 AARSP49588 968 aaKnown RBP eCLIP8.11□□□□□ -1.113e-6■□□□□ 10.9
CTNND1-233ENST00000532787 ARFIP2P53365 341 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 EFTUD2Q15029 972 aaKnown RBP eCLIP8.11□□□□□ -1.113e-8■■■■■ 29.5
CTNND1-233ENST00000532787 SUPT20HL1Q3ZLR7 823 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 ITPRIPL1Q6GPH6 555 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 TRMT10CQ7L0Y3 403 aaKnown RBP8.11□□□□□ -1.11
CTNND1-233ENST00000532787 ZNF589Q86UQ0 364 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-233ENST00000532787 TTC8Q8TAM2 541 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 TRPV6Q9H1D0 765 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 DNAJC12Q9UKB3 198 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 A0A0G2JND7 137 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 H3BRJ5 948 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 ACSL3O95573 720 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 DDIT3P35638 169 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 RAP1GDS1P52306 607 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 EPHB1P54762 984 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 GOLGA8FQ08AF8 430 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 GOLGA8DPQ0D2H9 430 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 FOXP4Q8IVH2 680 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-233ENST00000532787 TRIM59Q8IWR1 403 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 DCLK2Q8N568 766 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 ATP11CQ8NB49 1132 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 FAM20AQ96MK3 541 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 BEGAINQ9BUH8 593 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 MSTO1Q9BUK6 570 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 KIF9Q9HAQ2 790 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 PI4KBQ9UBF8 816 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 CDK12Q9NYV4 1490 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-233ENST00000532787 KRT8P05787 483 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 STAT4Q14765 748 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 NAALADL2Q58DX5 795 aa8.11□□□□□ -1.11
CTNND1-233ENST00000532787 ZNF667Q5HYK9 610 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms