RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	TMEM265	A0A087WTH1	108 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370		A0A087WWV3	80 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	LCHN	A4D1U4	455 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	TLL1	O43897	1013 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	GJB5	O95377	273 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	AMH	P03971	560 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	OR52Z1	P0C646	297 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	TEC	P42680	631 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	C4orf19	Q8IY42	314 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	OSMR	Q99650	979 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	ZBED2	Q9BTP6	218 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	ADAMTS10	Q9H324	1103 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	ZSWIM4	Q9H7M6	989 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	SLC28A3	Q9HAS3	691 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	CYP26B1	Q9NR63	512 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	FOXD4L1	Q9NU39	408 aa		19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	NOC2L	Q9Y3T9	749 aa	Known RBP	19.52	■□□□□ 0.72
CTSB-223	ENST00000532370	IGKV6-21	A0A0C4DH24	114 aa		19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	ENPP3	O14638	875 aa		19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	TMOD1	P28289	359 aa		19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	YWHAB	P31946	246 aa	Known RBP	19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	NLRP11	P59045	1033 aa	Known RBP	19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	ORC2	Q13416	577 aa	Predicted RBP	19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	PPP2R2D	Q66LE6	453 aa		19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	SPRED2	Q7Z698	418 aa		19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	RTN4RL1	Q86UN2	441 aa	Predicted RBP	19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	LINC01599	Q8WXQ3	324 aa		19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	MYLIP	Q8WY64	445 aa		19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	CEP170P1	Q96L14	293 aa		19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	MAP7D2	Q96T17	732 aa		19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	TMX1	Q9H3N1	280 aa		19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	SQOR	Q9Y6N5	450 aa		19.51	■□□□□ 0.71
CTSB-223	ENST00000532370	DKC1	O60832	514 aa	Known RBP eCLIP	19.5	■□□□□ 0.71
CTSB-223	ENST00000532370	MAF	O75444	373 aa	Predicted RBP	19.5	■□□□□ 0.71
CTSB-223	ENST00000532370	UPP2	O95045	317 aa		19.5	■□□□□ 0.71
CTSB-223	ENST00000532370	CRYBB1	P53674	252 aa	Predicted RBP	19.5	■□□□□ 0.71
CTSB-223	ENST00000532370	NFX1	Q12986	1120 aa	Known RBP	19.5	■□□□□ 0.71
CTSB-223	ENST00000532370	PAK2	Q13177	524 aa		19.5	■□□□□ 0.71
CTSB-223	ENST00000532370	PTGDR	Q13258	359 aa		19.5	■□□□□ 0.71
CTSB-223	ENST00000532370	USP38	Q8NB14	1042 aa		19.5	■□□□□ 0.71
CTSB-223	ENST00000532370	RAD9A	Q99638	391 aa		19.5	■□□□□ 0.71
CTSB-223	ENST00000532370	CERS4	Q9HA82	394 aa		19.5	■□□□□ 0.71
CTSB-223	ENST00000532370	BMP2K	Q9NSY1	1161 aa	Predicted RBP	19.5	■□□□□ 0.71
CTSB-223	ENST00000532370		K7ELQ4	463 aa	Predicted RBP	19.49	■□□□□ 0.71
CTSB-223	ENST00000532370	RPS6KA5	O75582	802 aa		19.49	■□□□□ 0.71
CTSB-223	ENST00000532370	SPATA31C1	P0DKV0	1188 aa		19.49	■□□□□ 0.71
CTSB-223	ENST00000532370	TOP1MT	Q969P6	601 aa		19.49	■□□□□ 0.71
CTSB-223	ENST00000532370	PRDM12	Q9H4Q4	367 aa		19.49	■□□□□ 0.71
CTSB-223	ENST00000532370	ERVK-5	Q9HDB9	667 aa		19.49	■□□□□ 0.71
CTSB-223	ENST00000532370	ST3GAL5	Q9UNP4	418 aa		19.49	■□□□□ 0.71
CTSB-223	ENST00000532370	KAT6A	Q92794	2004 aa		19.49	■□□□□ 0.71
CTSB-223	ENST00000532370	MED24	O75448	989 aa		19.48	■□□□□ 0.71
CTSB-223	ENST00000532370	CSDE1	O75534	798 aa	Known RBP	19.48	■□□□□ 0.71
CTSB-223	ENST00000532370	LYPLA2	O95372	231 aa		19.48	■□□□□ 0.71
CTSB-223	ENST00000532370	GPC3	P51654	580 aa		19.48	■□□□□ 0.71
CTSB-223	ENST00000532370	TAP1	Q03518	808 aa		19.48	■□□□□ 0.71
CTSB-223	ENST00000532370	IL17A	Q16552	155 aa		19.48	■□□□□ 0.71
CTSB-223	ENST00000532370	XKR9	Q5GH70	373 aa		19.48	■□□□□ 0.71
CTSB-223	ENST00000532370	FAM228A	Q86W67	206 aa		19.48	■□□□□ 0.71
CTSB-223	ENST00000532370	CATSPER3	Q86XQ3	398 aa		19.48	■□□□□ 0.71
CTSB-223	ENST00000532370	PIGO	Q8TEQ8	1089 aa		19.48	■□□□□ 0.71
CTSB-223	ENST00000532370	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	19.48	■□□□□ 0.71
CTSB-223	ENST00000532370	SUCLA2	Q9P2R7	463 aa	Predicted RBP	19.48	■□□□□ 0.71
CTSB-223	ENST00000532370	STXBP5L	Q9Y2K9	1186 aa		19.48	■□□□□ 0.71
CTSB-223	ENST00000532370	PRUNE2	Q8WUY3	3088 aa		19.47	■□□□□ 0.71
CTSB-223	ENST00000532370	MGEA5	O60502	916 aa		19.47	■□□□□ 0.71
CTSB-223	ENST00000532370	RILPL1	Q5EBL4	403 aa		19.47	■□□□□ 0.71
CTSB-223	ENST00000532370	OTUD6A	Q7L8S5	288 aa		19.47	■□□□□ 0.71
CTSB-223	ENST00000532370	KSR1	Q8IVT5	923 aa		19.47	■□□□□ 0.71
CTSB-223	ENST00000532370	NEK9	Q8TD19	979 aa		19.47	■□□□□ 0.71
CTSB-223	ENST00000532370	SNX21	Q969T3	373 aa		19.47	■□□□□ 0.71
CTSB-223	ENST00000532370	TMEM143	Q96AN5	459 aa		19.47	■□□□□ 0.71
CTSB-223	ENST00000532370	DHX33	Q9H6R0	707 aa	Known RBP	19.47	■□□□□ 0.71
CTSB-223	ENST00000532370	VPS37C	A5D8V6	355 aa	Predicted RBP	19.46	■□□□□ 0.71
CTSB-223	ENST00000532370	EPOP	A6NHQ4	379 aa		19.46	■□□□□ 0.71
CTSB-223	ENST00000532370	FGFR4	P22455	802 aa		19.46	■□□□□ 0.71
CTSB-223	ENST00000532370	DNM2	P50570	870 aa		19.46	■□□□□ 0.71
CTSB-223	ENST00000532370	FXR2	P51116	673 aa	Known RBP eCLIP	19.46	■□□□□ 0.71
CTSB-223	ENST00000532370	POLG	P54098	1239 aa	Predicted RBP	19.46	■□□□□ 0.71
CTSB-223	ENST00000532370	HTRA4	P83105	476 aa	Predicted RBP	19.46	■□□□□ 0.71
CTSB-223	ENST00000532370	FERMT3	Q86UX7	667 aa		19.46	■□□□□ 0.71
CTSB-223	ENST00000532370	RHPN2	Q8IUC4	686 aa		19.46	■□□□□ 0.71
CTSB-223	ENST00000532370	NLRP7	Q8WX94	980 aa		19.46	■□□□□ 0.71
CTSB-223	ENST00000532370	SLC7A3	Q8WY07	619 aa		19.46	■□□□□ 0.71
CTSB-223	ENST00000532370	INTS4	Q96HW7	963 aa	Known RBP	19.46	■□□□□ 0.71
CTSB-223	ENST00000532370	SCLT1	Q96NL6	688 aa		19.46	■□□□□ 0.71
CTSB-223	ENST00000532370	TSPYL2	Q9H2G4	693 aa	Predicted RBP	19.46	■□□□□ 0.71
CTSB-223	ENST00000532370	RFXAP	O00287	272 aa		19.45	■□□□□ 0.7
CTSB-223	ENST00000532370	GPR182	O15218	404 aa		19.45	■□□□□ 0.7
CTSB-223	ENST00000532370	DARS	P14868	501 aa	Known RBP	19.45	■□□□□ 0.7
CTSB-223	ENST00000532370	SYT1	P21579	422 aa		19.45	■□□□□ 0.7
CTSB-223	ENST00000532370	IBSP	P21815	317 aa	Predicted RBP	19.45	■□□□□ 0.7
CTSB-223	ENST00000532370	EIF4B	P23588	611 aa	Known RBP	19.45	■□□□□ 0.7
CTSB-223	ENST00000532370	ADGRE1	Q14246	886 aa		19.45	■□□□□ 0.7
CTSB-223	ENST00000532370	EMC2	Q15006	297 aa		19.45	■□□□□ 0.7
CTSB-223	ENST00000532370	ECM1	Q16610	540 aa		19.45	■□□□□ 0.7
CTSB-223	ENST00000532370	POTEG	Q6S5H5	508 aa		19.45	■□□□□ 0.7
CTSB-223	ENST00000532370	PRPF31	Q8WWY3	499 aa	Known RBP	19.45	■□□□□ 0.7
CTSB-223	ENST00000532370	YME1L1	Q96TA2	773 aa		19.45	■□□□□ 0.7
CTSB-223	ENST00000532370	POLR3C	Q9BUI4	534 aa	Predicted RBP	19.45	■□□□□ 0.7

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