RNA–Protein interactions for RNA: ENST00000532354.1

CAVIN3-204, Transcript of caveolae associated protein 3, humanhuman

TSL 2

Gene CAVIN3, Length 1,025 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-204ENST00000532354 CLCN3P51790 818 aa18.61■□□□□ 0.57
CAVIN3-204ENST00000532354 PRKCEQ02156 737 aa18.61■□□□□ 0.57
CAVIN3-204ENST00000532354 NONOQ15233 471 aaKnown RBP eCLIP18.61■□□□□ 0.57
CAVIN3-204ENST00000532354 LEXMQ3ZCV2 418 aa18.61■□□□□ 0.57
CAVIN3-204ENST00000532354 KRT25Q7Z3Z0 450 aa18.61■□□□□ 0.57
CAVIN3-204ENST00000532354 FAM228AQ86W67 206 aa18.61■□□□□ 0.57
CAVIN3-204ENST00000532354 RDM1Q8NG50 284 aa18.61■□□□□ 0.57
CAVIN3-204ENST00000532354 PHF20Q9BVI0 1012 aa18.61■□□□□ 0.57
CAVIN3-204ENST00000532354 PLVAPQ9BX97 442 aa18.61■□□□□ 0.57
CAVIN3-204ENST00000532354 LMAN2LQ9H0V9 348 aa18.61■□□□□ 0.57
CAVIN3-204ENST00000532354 NSUN3Q9H649 340 aaKnown RBP18.61■□□□□ 0.57
CAVIN3-204ENST00000532354 LRFN2Q9ULH4 789 aa18.61■□□□□ 0.57
CAVIN3-204ENST00000532354 STK36Q9NRP7 1315 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 DTNBO60941 627 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 CTDNEP1O95476 244 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 TMOD1P28289 359 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 GATMP50440 423 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 NLRP11P59045 1033 aaKnown RBP18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 COL19A1Q14993 1142 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 INF2Q27J81 1249 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 PAN2Q504Q3 1202 aaKnown RBP18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 SLC24A5Q71RS6 500 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 MIER3Q7Z3K6 550 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 LRRC71Q8N4P6 559 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 ETNPPLQ8TBG4 499 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 ADAMTS10Q9H324 1103 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 PLAGL2Q9UPG8 496 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 AKT3Q9Y243 479 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 PCDHB7Q9Y5E2 793 aa18.6■□□□□ 0.57
CAVIN3-204ENST00000532354 WDR81Q562E7 1941 aa18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 DENND3A2RUS2 1198 aa18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 C9IYK1 514 aa18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 STBD1O95210 358 aa18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 COL9A1P20849 921 aa18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 AK2P54819 239 aa18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 FAM189BP81408 668 aa18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 DSC3Q14574 896 aa18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 TARBP2Q15633 366 aaKnown RBP18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 NEK9Q8TD19 979 aa18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 P2RX5Q93086 422 aa18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 PABPC5Q96DU9 382 aaKnown RBP18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 MAP7D2Q96T17 732 aa18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 ALG13Q9NP73 1137 aaKnown RBP18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 C1orf112Q9NSG2 853 aa18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 GJB4Q9NTQ9 266 aa18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 DDX25Q9UHL0 483 aaKnown RBP18.59■□□□□ 0.57
CAVIN3-204ENST00000532354 MYO7AQ13402 2215 aa18.58■□□□□ 0.57
CAVIN3-204ENST00000532354 SLC37A4O43826 429 aa18.58■□□□□ 0.56
CAVIN3-204ENST00000532354 IBSPP21815 317 aaPredicted RBP18.58■□□□□ 0.56
CAVIN3-204ENST00000532354 CAMK1Q14012 370 aa18.58■□□□□ 0.56
CAVIN3-204ENST00000532354 ANKRD1Q15327 319 aa18.58■□□□□ 0.56
CAVIN3-204ENST00000532354 LETM2Q2VYF4 491 aa18.58■□□□□ 0.56
CAVIN3-204ENST00000532354 NAALADL2Q58DX5 795 aa18.58■□□□□ 0.56
CAVIN3-204ENST00000532354 XKR3Q5GH77 459 aa18.58■□□□□ 0.56
CAVIN3-204ENST00000532354 ZNF710Q8N1W2 664 aa18.58■□□□□ 0.56
CAVIN3-204ENST00000532354 NIFKQ9BYG3 293 aaKnown RBP18.58■□□□□ 0.56
CAVIN3-204ENST00000532354 CCDC194A0A1B0GVG4 234 aa18.57■□□□□ 0.56
CAVIN3-204ENST00000532354 MMP1P03956 469 aa18.57■□□□□ 0.56
CAVIN3-204ENST00000532354 ITGB1P05556 798 aa18.57■□□□□ 0.56
CAVIN3-204ENST00000532354 XBP1P17861 261 aa18.57■□□□□ 0.56
CAVIN3-204ENST00000532354 TBC1D8BQ0IIM8 1120 aa18.57■□□□□ 0.56
CAVIN3-204ENST00000532354 FAM102BQ5T8I3 360 aa18.57■□□□□ 0.56
CAVIN3-204ENST00000532354 PPP4R3AQ6IN85 833 aa18.57■□□□□ 0.56
CAVIN3-204ENST00000532354 KLHL23Q8NBE8 558 aa18.57■□□□□ 0.56
CAVIN3-204ENST00000532354 SPPL3Q8TCT6 385 aa18.57■□□□□ 0.56
CAVIN3-204ENST00000532354 OXER1Q8TDS5 423 aa18.57■□□□□ 0.56
CAVIN3-204ENST00000532354 ZNF668Q96K58 619 aaPredicted RBP18.57■□□□□ 0.56
CAVIN3-204ENST00000532354 CEP89Q96ST8 783 aa18.57■□□□□ 0.56
CAVIN3-204ENST00000532354 RNF216Q9NWF9 866 aaPredicted RBP18.57■□□□□ 0.56
CAVIN3-204ENST00000532354 H3BQ06 376 aaPredicted RBP18.56■□□□□ 0.56
CAVIN3-204ENST00000532354 NCK2O43639 380 aa18.56■□□□□ 0.56
CAVIN3-204ENST00000532354 FDPSP14324 419 aaKnown RBP18.56■□□□□ 0.56
CAVIN3-204ENST00000532354 EIF4BP23588 611 aaKnown RBP18.56■□□□□ 0.56
CAVIN3-204ENST00000532354 DNAJB1P25685 340 aa18.56■□□□□ 0.56
CAVIN3-204ENST00000532354 GPC3P51654 580 aa18.56■□□□□ 0.56
CAVIN3-204ENST00000532354 HYAL1Q12794 435 aa18.56■□□□□ 0.56
CAVIN3-204ENST00000532354 PTCRAQ6ISU1 281 aaPredicted RBP18.56■□□□□ 0.56
CAVIN3-204ENST00000532354 NEK8Q86SG6 692 aa18.56■□□□□ 0.56
CAVIN3-204ENST00000532354 FAM20AQ96MK3 541 aa18.56■□□□□ 0.56
CAVIN3-204ENST00000532354 ELAC1Q9H777 363 aaKnown RBP18.56■□□□□ 0.56
CAVIN3-204ENST00000532354 KCNMB3Q9NPA1 279 aa18.56■□□□□ 0.56
CAVIN3-204ENST00000532354 TMEM161AQ9NX61 479 aa18.56■□□□□ 0.56
CAVIN3-204ENST00000532354 ORC3Q9UBD5 711 aaPredicted RBP18.56■□□□□ 0.56
CAVIN3-204ENST00000532354 IGKV6-21A0A0C4DH24 114 aa18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 TMEM150BA6NC51 233 aa18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 GRXCR2A6NFK2 248 aa18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 TBKBP1A7MCY6 615 aa18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 EML1O00423 815 aa18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 LTBRP36941 435 aa18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 DRP2Q13474 957 aa18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 ME3Q16798 604 aa18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 CTC1Q2NKJ3 1217 aa18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 MTERF2Q49AM1 385 aa18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 EARS2Q5JPH6 523 aaKnown RBP18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 PIK3AP1Q6ZUJ8 805 aa18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 FAM178BQ8IXR5 827 aa18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 NECAB1Q8N987 351 aa18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 SH2D3AQ9BRG2 576 aa18.55■□□□□ 0.56
CAVIN3-204ENST00000532354 ATP6V0A4Q9HBG4 840 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms