RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 FAM133AQ8N9E0 248 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 NEK9Q8TD19 979 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 ZNF526Q8TF50 670 aaPredicted RBP16.68■□□□□ 0.26
SRPRA-206ENST00000532259 KIFC3Q9BVG8 833 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 ODF2LQ9ULJ1 636 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 LCTP09848 1927 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 AFPP02771 609 aaKnown RBP16.67■□□□□ 0.26
SRPRA-206ENST00000532259 RPL13P26373 211 aaKnown RBP16.67■□□□□ 0.26
SRPRA-206ENST00000532259 KRT83P78385 493 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 SPA17Q15506 151 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 EAPPQ56P03 285 aaPredicted RBP16.67■□□□□ 0.26
SRPRA-206ENST00000532259 FAM102BQ5T8I3 360 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 LBX2Q6XYB7 198 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 ANKRD35Q8N283 1001 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 RBM46Q8TBY0 533 aaKnown RBP16.67■□□□□ 0.26
SRPRA-206ENST00000532259 UBXN4Q92575 508 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 SLC35C1Q96A29 364 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 GABBR1Q9UBS5 961 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 EIF3DO15371 548 aaKnown RBP eCLIP16.67■□□□□ 0.26
SRPRA-206ENST00000532259 RRP9O43818 475 aaKnown RBP16.67■□□□□ 0.26
SRPRA-206ENST00000532259 TRIM49P0CI25 452 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 TRIM49CP0CI26 452 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 PNMA6AP0CW24 399 aaPredicted RBP16.67■□□□□ 0.26
SRPRA-206ENST00000532259 PSMC5P62195 406 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 FBXO38Q6PIJ6 1188 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 FRMD5Q7Z6J6 570 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 FAM186BQ8IYM0 893 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 SAMD3Q8N6K7 520 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 DRC1Q96MC2 740 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 IFIH1Q9BYX4 1025 aaKnown RBP16.67■□□□□ 0.26
SRPRA-206ENST00000532259 AGPAT3Q9NRZ7 376 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 FAM184BQ9ULE4 1060 aa16.67■□□□□ 0.26
SRPRA-206ENST00000532259 EIF3CLB5ME19 914 aaKnown RBP16.66■□□□□ 0.26
SRPRA-206ENST00000532259 PPP1R37O75864 691 aa16.66■□□□□ 0.26
SRPRA-206ENST00000532259 PEX3P56589 373 aa16.66■□□□□ 0.26
SRPRA-206ENST00000532259 SWSAP1Q6NVH7 229 aa16.66■□□□□ 0.26
SRPRA-206ENST00000532259 DPY19L2P1Q6NXN4 242 aa16.66■□□□□ 0.26
SRPRA-206ENST00000532259 HS2ST1Q7LGA3 356 aa16.66■□□□□ 0.26
SRPRA-206ENST00000532259 CCDC170Q8IYT3 715 aa16.66■□□□□ 0.26
SRPRA-206ENST00000532259 GPRASP2Q96D09 838 aa16.66■□□□□ 0.26
SRPRA-206ENST00000532259 EIF3CQ99613 913 aaKnown RBP16.66■□□□□ 0.26
SRPRA-206ENST00000532259 NAPGQ99747 312 aaPredicted RBP16.66■□□□□ 0.26
SRPRA-206ENST00000532259 STRA6Q9BX79 667 aa16.66■□□□□ 0.26
SRPRA-206ENST00000532259 MOV10L1Q9BXT6 1211 aaKnown RBP16.66■□□□□ 0.26
SRPRA-206ENST00000532259 GBP3Q9H0R5 595 aa16.66■□□□□ 0.26
SRPRA-206ENST00000532259 KCND2Q9NZV8 630 aa16.66■□□□□ 0.26
SRPRA-206ENST00000532259 CEP72Q9P209 647 aa16.66■□□□□ 0.26
SRPRA-206ENST00000532259 AJAP1Q9UKB5 411 aaPredicted RBP16.66■□□□□ 0.26
SRPRA-206ENST00000532259 PNMA2Q9UL42 364 aa16.66■□□□□ 0.26
SRPRA-206ENST00000532259 SLC16A4O15374 487 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 SRGAP2O75044 1071 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 TADA3O75528 432 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 POTEJP0CG39 1038 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 HNRNPH3P31942 346 aaKnown RBP16.65■□□□□ 0.26
SRPRA-206ENST00000532259 EPHX2P34913 555 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 KRT76Q01546 638 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 EXOC3L4Q17RC7 722 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 SFMBT2Q5VUG0 894 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 HGSNATQ68CP4 663 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 SEPT14Q6ZU15 432 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 EEPD1Q7L9B9 569 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 NCAPG2Q86XI2 1143 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 DNAAF5Q86Y56 855 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 CCDC60Q8IWA6 550 aaPredicted RBP16.65■□□□□ 0.26
SRPRA-206ENST00000532259 C4orf19Q8IY42 314 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 BORCS6Q96GS4 357 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.65■□□□□ 0.26
SRPRA-206ENST00000532259 HAUS4Q9H6D7 363 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 MLXIPQ9HAP2 919 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 TXNRD2Q9NNW7 524 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.65■□□□□ 0.266e-11■■■■■ 104.8
SRPRA-206ENST00000532259 DBR1Q9UK59 544 aaKnown RBP16.65■□□□□ 0.26
SRPRA-206ENST00000532259 PCDHA10Q9Y5I2 948 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 FHOD1Q9Y613 1164 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 SPDYE4A6NLX3 237 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 IREB2P48200 963 aaKnown RBP16.65■□□□□ 0.26
SRPRA-206ENST00000532259 GANQ9H2C0 597 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 PDCL3Q9H2J4 239 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 GCNT4Q9P109 453 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 SEL1LQ9UBV2 794 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 PCDHA13Q9Y5I0 950 aa16.65■□□□□ 0.26
SRPRA-206ENST00000532259 KRT86O43790 486 aa16.64■□□□□ 0.26
SRPRA-206ENST00000532259 EXOC3O60645 756 aa16.64■□□□□ 0.26
SRPRA-206ENST00000532259 PON1P27169 355 aa16.64■□□□□ 0.26
SRPRA-206ENST00000532259 JAK3P52333 1124 aa16.64■□□□□ 0.26
SRPRA-206ENST00000532259 CYFIP1Q7L576 1253 aa16.64■□□□□ 0.26
SRPRA-206ENST00000532259 ASCC2Q9H1I8 757 aaPredicted RBP16.64■□□□□ 0.26
SRPRA-206ENST00000532259 LARSQ9P2J5 1176 aaKnown RBP16.64■□□□□ 0.26
SRPRA-206ENST00000532259 PAPPA2Q9BXP8 1791 aa16.64■□□□□ 0.25
SRPRA-206ENST00000532259 CCDC169A6NNP5 214 aa16.64■□□□□ 0.25
SRPRA-206ENST00000532259 LYPLA2O95372 231 aa16.64■□□□□ 0.25
SRPRA-206ENST00000532259 ATP1A1P05023 1023 aaKnown RBP16.64■□□□□ 0.25
SRPRA-206ENST00000532259 PSMC2P35998 433 aaKnown RBP16.64■□□□□ 0.25
SRPRA-206ENST00000532259 KIF5AQ12840 1032 aa16.64■□□□□ 0.25
SRPRA-206ENST00000532259 JPH1Q9HDC5 661 aaPredicted RBP16.64■□□□□ 0.25
SRPRA-206ENST00000532259 A0A0G2JLL6 359 aaPredicted RBP16.63■□□□□ 0.25
SRPRA-206ENST00000532259 STBD1O95210 358 aa16.63■□□□□ 0.25
SRPRA-206ENST00000532259 PGK2P07205 417 aa16.63■□□□□ 0.25
SRPRA-206ENST00000532259 PLS3P13797 630 aa16.63■□□□□ 0.25
SRPRA-206ENST00000532259 ACTR2P61160 394 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms