RNA–Protein interactions for RNA: ENST00000532181.5

SSH3-208, Transcript of slingshot protein phosphatase 3, human

TSL 3

Gene SSH3, Length 948 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSH3-208	ENST00000532181	PPP1R16B	Q96T49	567 aa		13.81	□□□□□ -0.2
SSH3-208	ENST00000532181	PCDHA11	Q9Y5I1	949 aa		13.81	□□□□□ -0.2
SSH3-208	ENST00000532181	SI	P14410	1827 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	MYH9	P35579	1960 aa	Known RBP	13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	IGKV6-21	A0A0C4DH24	114 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	SMIM35	A0A1B0GVV1	85 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	RSPH10B2	B2RC85	870 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	CXCL10	P02778	98 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	CA3	P07451	260 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	RSPH10B	P0C881	870 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	DEFB103A	P81534	67 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	PPP2R2D	Q66LE6	453 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	KCNK18	Q7Z418	384 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	TMEM40	Q8WWA1	233 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	GAS2L1	Q99501	681 aa	Predicted RBP	13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	AGO3	Q9H9G7	860 aa	Known RBP	13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	NRBP2	Q9NSY0	501 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	TCEAL9	Q9UHQ7	104 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	CDY2A	Q9Y6F7	541 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	EYS	Q5T1H1	3165 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	COL1A2	P08123	1366 aa		13.8	□□□□□ -0.2
SSH3-208	ENST00000532181	GPR32	O75388	356 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	LYPLA2	O95372	231 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	VTN	P04004	478 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	ZSCAN22	P10073	491 aa	Predicted RBP	13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	PRPH	P41219	470 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	WDR5	P61964	334 aa	Known RBP	13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	MRPS6	P82932	125 aa	Known RBP	13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	CEBPZ	Q03701	1054 aa	Known RBP	13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	LPIN1	Q14693	890 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	EFCAB12	Q6NXP0	572 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	TAF2	Q6P1X5	1199 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	POTEG	Q6S5H5	508 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	USP49	Q70CQ1	688 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	HERC6	Q8IVU3	1022 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	FAM167A	Q96KS9	214 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	SLC9A7	Q96T83	725 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	ADAMTS10	Q9H324	1103 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	ZSWIM4	Q9H7M6	989 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	XPNPEP1	Q9NQW7	623 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	CYP26B1	Q9NR63	512 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	TFIP11	Q9UBB9	837 aa	Known RBP	13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	KAT6A	Q92794	2004 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	CHD9	Q3L8U1	2897 aa		13.79	□□□□□ -0.2
SSH3-208	ENST00000532181	EVPL	Q92817	2033 aa		13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	VWA3A	A6NCI4	1184 aa		13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	EPOP	A6NHQ4	379 aa		13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	YWHAB	P31946	246 aa	Known RBP	13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	DDIT3	P35638	169 aa		13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	KCNJ6	P48051	423 aa		13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	PDIA5	Q14554	519 aa		13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	FAM117B	Q6P1L5	589 aa		13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	CNKSR3	Q6P9H4	555 aa		13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	KSR1	Q8IVT5	923 aa		13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	MICALL1	Q8N3F8	863 aa		13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	DBF4B	Q8NFT6	615 aa		13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	PNMA5	Q96PV4	448 aa		13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	DHX33	Q9H6R0	707 aa	Known RBP	13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	SUGCT	Q9HAC7	445 aa		13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	LRWD1	Q9UFC0	647 aa		13.78	□□□□□ -0.2
SSH3-208	ENST00000532181	LCHN	A4D1U4	455 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	MAF	O75444	373 aa	Predicted RBP	13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	BAIAP3	O94812	1187 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	BRD1	O95696	1058 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	F13A1	P00488	732 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	HSP90AA1	P07900	732 aa	Known RBP	13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	GHR	P10912	638 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	RPA1	P27694	616 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	MARCKS	P29966	332 aa	Predicted RBP	13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	KIZ	Q2M2Z5	673 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	PLEKHG4	Q58EX7	1191 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	SPECC1	Q5M775	1068 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	FBXO47	Q5MNV8	452 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	DTHD1	Q6ZMT9	781 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	METTL13	Q8N6R0	699 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	PHOSPHO2	Q8TCD6	241 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	CEP170P1	Q96L14	293 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	CLIC6	Q96NY7	704 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	CELF4	Q9BZC1	486 aa	Known RBP	13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	POLD4	Q9HCU8	107 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	TUFT1	Q9NNX1	390 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	FBXO2	Q9UK22	296 aa	Predicted RBP	13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	PRUNE2	Q8WUY3	3088 aa		13.77	□□□□□ -0.21
SSH3-208	ENST00000532181	LAD1	O00515	517 aa		13.76	□□□□□ -0.21
SSH3-208	ENST00000532181	TLL1	O43897	1013 aa		13.76	□□□□□ -0.21
SSH3-208	ENST00000532181	CAND2	O75155	1236 aa		13.76	□□□□□ -0.21
SSH3-208	ENST00000532181	CSDE1	O75534	798 aa	Known RBP	13.76	□□□□□ -0.21
SSH3-208	ENST00000532181	CCT6A	P40227	531 aa	Known RBP	13.76	□□□□□ -0.21
SSH3-208	ENST00000532181	RARRES1	P49788	294 aa		13.76	□□□□□ -0.21
SSH3-208	ENST00000532181	TAP1	Q03518	808 aa		13.76	□□□□□ -0.21
SSH3-208	ENST00000532181	TBC1D8B	Q0IIM8	1120 aa		13.76	□□□□□ -0.21
SSH3-208	ENST00000532181	GRB10	Q13322	594 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms