RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 ZNF302Q9NR11 478 aa13.14□□□□□ -0.31
CMTM1-215ENST00000531885 CACNA1HO95180 2353 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 C9IYK1 514 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 ATG7O95352 703 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 ARP10275 920 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 TMOD1P28289 359 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 MTMR3Q13615 1198 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 KIZQ2M2Z5 673 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 TMEM184AQ6ZMB5 413 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 NIPA1Q7RTP0 329 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 KIAA0319LQ8IZA0 1049 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 ZNF710Q8N1W2 664 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 MAP7D2Q96T17 732 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 OSMRQ99650 979 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 ANO3Q9BYT9 981 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 FAM86C1Q9NVL1 165 aa13.13□□□□□ -0.31
CMTM1-215ENST00000531885 KMT2EQ8IZD2 1858 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 EVPLQ92817 2033 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 ZFHX2Q9C0A1 2572 aaPredicted RBP13.12□□□□□ -0.31
CMTM1-215ENST00000531885 MEIS1O00470 390 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 FSCN2O14926 492 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 MGEA5O60502 916 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 FGFR1P11362 822 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 SP100P23497 879 aaPredicted RBP13.12□□□□□ -0.31
CMTM1-215ENST00000531885 PDE4AP27815 886 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 VCPP55072 806 aaKnown RBP13.12□□□□□ -0.31
CMTM1-215ENST00000531885 FOXK2Q01167 660 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 ITIH3Q06033 890 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 APOBRQ0VD83 1088 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 ITGB3BPQ13352 177 aaPredicted RBP13.12□□□□□ -0.31
CMTM1-215ENST00000531885 SMC1AQ14683 1233 aaKnown RBP13.12□□□□□ -0.31
CMTM1-215ENST00000531885 KCNT2Q6UVM3 1135 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 ABHD15Q6UXT9 468 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 RAB11FIP4Q86YS3 637 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 KREMEN2Q8NCW0 462 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 VN1R2Q8NFZ6 395 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 CYP2W1Q8TAV3 490 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 BBXQ8WY36 941 aaPredicted RBP13.12□□□□□ -0.31
CMTM1-215ENST00000531885 ASIC4Q96FT7 647 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 RIPOR3Q96MK2 946 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 SCLT1Q96NL6 688 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 PPP1R16BQ96T49 567 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 APOL5Q9BWW9 433 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 SPG21Q9NZD8 308 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 SORCS3Q9UPU3 1222 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 AKT3Q9Y243 479 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 VPS13AQ96RL7 3174 aa13.12□□□□□ -0.31
CMTM1-215ENST00000531885 IGKV6D-21A0A0A0MT36 114 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 CARNS1A5YM72 827 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 SMCO2A6NFE2 343 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 MAGEB2O15479 319 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 SREBF1P36956 1147 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 MTHFRP42898 656 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 RBM10P98175 930 aaKnown RBP13.11□□□□□ -0.31
CMTM1-215ENST00000531885 SETQ01105 290 aaPredicted RBP13.11□□□□□ -0.31
CMTM1-215ENST00000531885 RNF20Q5VTR2 975 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 WWC2Q6AWC2 1192 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 MCTP2Q6DN12 878 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 SWSAP1Q6NVH7 229 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 FAM228AQ86W67 206 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 PLA2G4DQ86XP0 818 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 CCDC60Q8IWA6 550 aaPredicted RBP13.11□□□□□ -0.31
CMTM1-215ENST00000531885 SMAP1Q8IYB5 467 aaPredicted RBP13.11□□□□□ -0.31
CMTM1-215ENST00000531885 RNF169Q8NCN4 708 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 TMEM40Q8WWA1 233 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 PGBD1Q96JS3 809 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 FAM167AQ96KS9 214 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 MFSD1Q9H3U5 465 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 CWH43Q9H720 699 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 TBC1D22BQ9NU19 505 aa13.11□□□□□ -0.31
CMTM1-215ENST00000531885 MYH9P35579 1960 aaKnown RBP13.11□□□□□ -0.31
CMTM1-215ENST00000531885 SPDYE4A6NLX3 237 aa13.1□□□□□ -0.31
CMTM1-215ENST00000531885 H0Y858 1186 aa13.1□□□□□ -0.31
CMTM1-215ENST00000531885 IPO5O00410 1097 aaKnown RBP13.1□□□□□ -0.31
CMTM1-215ENST00000531885 GALR2O43603 387 aaPredicted RBP13.1□□□□□ -0.31
CMTM1-215ENST00000531885 VTNP04004 478 aa13.1□□□□□ -0.31
CMTM1-215ENST00000531885 PSAPP07602 524 aa13.1□□□□□ -0.31
CMTM1-215ENST00000531885 ALDH7A1P49419 539 aaKnown RBP13.1□□□□□ -0.31
CMTM1-215ENST00000531885 FAM189BP81408 668 aa13.1□□□□□ -0.31
CMTM1-215ENST00000531885 RTN1Q16799 776 aa13.1□□□□□ -0.31
CMTM1-215ENST00000531885 ZNF746Q6NUN9 644 aaPredicted RBP13.1□□□□□ -0.31
CMTM1-215ENST00000531885 TRMT1LQ7Z2T5 733 aaKnown RBP13.1□□□□□ -0.31
CMTM1-215ENST00000531885 SGMS1Q86VZ5 419 aa13.1□□□□□ -0.31
CMTM1-215ENST00000531885 CCDC12Q8WUD4 166 aaPredicted RBP13.1□□□□□ -0.31
CMTM1-215ENST00000531885 TMEM169Q96HH4 297 aa13.1□□□□□ -0.31
CMTM1-215ENST00000531885 ZNF577Q9BSK1 485 aa13.1□□□□□ -0.31
CMTM1-215ENST00000531885 MRPL9Q9BYD2 267 aaKnown RBP13.1□□□□□ -0.31
CMTM1-215ENST00000531885 LRRC2Q9BYS8 371 aa13.1□□□□□ -0.31
CMTM1-215ENST00000531885 S1PR5Q9H228 398 aa13.1□□□□□ -0.31
CMTM1-215ENST00000531885 CDHR5Q9HBB8 845 aa13.1□□□□□ -0.31
CMTM1-215ENST00000531885 SAMM50Q9Y512 469 aa13.1□□□□□ -0.31
CMTM1-215ENST00000531885 PTPRZ1P23471 2315 aaPredicted RBP13.1□□□□□ -0.31
CMTM1-215ENST00000531885 HIDE1A8MVS5 230 aa13.09□□□□□ -0.31
CMTM1-215ENST00000531885 SLC27A2O14975 620 aa13.09□□□□□ -0.31
CMTM1-215ENST00000531885 ZBTB43O43298 467 aa13.09□□□□□ -0.31
CMTM1-215ENST00000531885 C22orf31O95567 290 aa13.09□□□□□ -0.31
CMTM1-215ENST00000531885 CCNE2O96020 404 aa13.09□□□□□ -0.31
CMTM1-215ENST00000531885 NLRP11P59045 1033 aaKnown RBP13.09□□□□□ -0.31
CMTM1-215ENST00000531885 SYCE2Q6PIF2 218 aa13.09□□□□□ -0.31
CMTM1-215ENST00000531885 PLCD3Q8N3E9 789 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms