RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 MYO10Q9HD67 2058 aa19.69■□□□□ 0.74
PKP3-208ENST00000531857 IGLV3-22A0A075B6J6 115 aa19.68■□□□□ 0.74
PKP3-208ENST00000531857 GPR32O75388 356 aa19.68■□□□□ 0.74
PKP3-208ENST00000531857 VTNP04004 478 aa19.68■□□□□ 0.74
PKP3-208ENST00000531857 CRYBB1P53674 252 aaPredicted RBP19.68■□□□□ 0.74
PKP3-208ENST00000531857 FAM189BP81408 668 aa19.68■□□□□ 0.74
PKP3-208ENST00000531857 AP3B2Q13367 1082 aa19.68■□□□□ 0.74
PKP3-208ENST00000531857 KCNC3Q14003 757 aa19.68■□□□□ 0.74
PKP3-208ENST00000531857 DSC3Q14574 896 aa19.68■□□□□ 0.74
PKP3-208ENST00000531857 JAKMIP3Q5VZ66 844 aa19.68■□□□□ 0.74
PKP3-208ENST00000531857 TRMT1LQ7Z2T5 733 aaKnown RBP19.68■□□□□ 0.74
PKP3-208ENST00000531857 TEX2Q8IWB9 1127 aa19.68■□□□□ 0.74
PKP3-208ENST00000531857 CRYGNQ8WXF5 182 aa19.68■□□□□ 0.74
PKP3-208ENST00000531857 FAM217BQ9NTX9 383 aaPredicted RBP19.68■□□□□ 0.74
PKP3-208ENST00000531857 TMEM161AQ9NX61 479 aa19.68■□□□□ 0.74
PKP3-208ENST00000531857 IPO5O00410 1097 aaKnown RBP19.67■□□□□ 0.74
PKP3-208ENST00000531857 ZBTB43O43298 467 aa19.67■□□□□ 0.74
PKP3-208ENST00000531857 ATF7P17544 494 aaPredicted RBP19.67■□□□□ 0.74
PKP3-208ENST00000531857 CDC27P30260 824 aa19.67■□□□□ 0.74
PKP3-208ENST00000531857 EXOSC10Q01780 885 aaKnown RBP19.67■□□□□ 0.74
PKP3-208ENST00000531857 ODR4Q5SWX8 454 aa19.67■□□□□ 0.74
PKP3-208ENST00000531857 PLPP4Q5VZY2 271 aa19.67■□□□□ 0.74
PKP3-208ENST00000531857 MIS18BP1Q6P0N0 1132 aa19.67■□□□□ 0.74
PKP3-208ENST00000531857 LRRC55Q6ZSA7 311 aa19.67■□□□□ 0.74
PKP3-208ENST00000531857 FAM43BQ6ZT52 329 aaPredicted RBP19.67■□□□□ 0.74
PKP3-208ENST00000531857 CKAP2LQ8IYA6 745 aa19.67■□□□□ 0.74
PKP3-208ENST00000531857 FBXL6Q8N531 539 aa19.67■□□□□ 0.74
PKP3-208ENST00000531857 NEK1Q96PY6 1258 aa19.67■□□□□ 0.74
PKP3-208ENST00000531857 CDCA3Q99618 268 aaPredicted RBP19.67■□□□□ 0.74
PKP3-208ENST00000531857 APOL5Q9BWW9 433 aa19.67■□□□□ 0.74
PKP3-208ENST00000531857 S1PR5Q9H228 398 aa19.67■□□□□ 0.74
PKP3-208ENST00000531857 ATP6V0A4Q9HBG4 840 aa19.67■□□□□ 0.74
PKP3-208ENST00000531857 RNF19AQ9NV58 838 aa19.67■□□□□ 0.74
PKP3-208ENST00000531857 RNF216Q9NWF9 866 aaPredicted RBP19.67■□□□□ 0.74
PKP3-208ENST00000531857 hCG_1984214I3L0E3 225 aa19.66■□□□□ 0.74
PKP3-208ENST00000531857 SIGLEC14Q08ET2 396 aa19.66■□□□□ 0.74
PKP3-208ENST00000531857 TCF15Q12870 199 aa19.66■□□□□ 0.74
PKP3-208ENST00000531857 PDE12Q6L8Q7 609 aaKnown RBP19.66■□□□□ 0.74
PKP3-208ENST00000531857 TMEM184AQ6ZMB5 413 aa19.66■□□□□ 0.74
PKP3-208ENST00000531857 SUGP1Q8IWZ8 645 aaKnown RBP19.66■□□□□ 0.74
PKP3-208ENST00000531857 METTL13Q8N6R0 699 aa19.66■□□□□ 0.74
PKP3-208ENST00000531857 ZNF713Q8N859 430 aaPredicted RBP19.66■□□□□ 0.74
PKP3-208ENST00000531857 MRPS27Q92552 414 aaKnown RBP19.66■□□□□ 0.74
PKP3-208ENST00000531857 ASIC4Q96FT7 647 aa19.66■□□□□ 0.74
PKP3-208ENST00000531857 ELAC1Q9H777 363 aaKnown RBP19.66■□□□□ 0.74
PKP3-208ENST00000531857 MAFBQ9Y5Q3 323 aaPredicted RBP19.66■□□□□ 0.74
PKP3-208ENST00000531857 USP34Q70CQ2 3546 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 HIDE1A8MVS5 230 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 CYP3A4P08684 503 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 LAG3P18627 525 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 PBX3P40426 434 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 TECP42680 631 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 PTPN5P54829 565 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 VCPP55072 806 aaKnown RBP19.65■□□□□ 0.74
PKP3-208ENST00000531857 PLCB3Q01970 1234 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 ADCK5Q3MIX3 580 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 ANKRD54Q6NXT1 300 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 LLGL2Q6P1M3 1020 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 SYCE2Q6PIF2 218 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 BBXQ8WY36 941 aaPredicted RBP19.65■□□□□ 0.74
PKP3-208ENST00000531857 CASD1Q96PB1 797 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 TCF25Q9BQ70 676 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 ZNF577Q9BSK1 485 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 LZTS1Q9Y250 596 aa19.65■□□□□ 0.74
PKP3-208ENST00000531857 GOLGA8AA7E2F4 631 aa19.64■□□□□ 0.73
PKP3-208ENST00000531857 GOLGA8BA8MQT2 603 aa19.64■□□□□ 0.73
PKP3-208ENST00000531857 SP100P23497 879 aaPredicted RBP19.64■□□□□ 0.73
PKP3-208ENST00000531857 CLCN3P51790 818 aa19.64■□□□□ 0.73
PKP3-208ENST00000531857 PKN1Q16512 942 aa19.64■□□□□ 0.73
PKP3-208ENST00000531857 DHX32Q7L7V1 743 aaKnown RBP19.64■□□□□ 0.73
PKP3-208ENST00000531857 RASEFQ8IZ41 740 aa19.64■□□□□ 0.73
PKP3-208ENST00000531857 TMEM117Q9H0C3 514 aa19.64■□□□□ 0.73
PKP3-208ENST00000531857 GLT8D2Q9H1C3 349 aa19.64■□□□□ 0.73
PKP3-208ENST00000531857 ENTPD7Q9NQZ7 604 aa19.64■□□□□ 0.73
PKP3-208ENST00000531857 CDH22Q9UJ99 828 aa19.64■□□□□ 0.73
PKP3-208ENST00000531857 KLF18A0A0U1RQI7 1052 aa19.63■□□□□ 0.73
PKP3-208ENST00000531857 FSD2A1L4K1 749 aa19.63■□□□□ 0.73
PKP3-208ENST00000531857 PTPN21Q16825 1174 aa19.63■□□□□ 0.73
PKP3-208ENST00000531857 RNF20Q5VTR2 975 aa19.63■□□□□ 0.73
PKP3-208ENST00000531857 ZNF746Q6NUN9 644 aaPredicted RBP19.63■□□□□ 0.73
PKP3-208ENST00000531857 KCNT2Q6UVM3 1135 aa19.63■□□□□ 0.73
PKP3-208ENST00000531857 RASGRP4Q8TDF6 673 aa19.63■□□□□ 0.73
PKP3-208ENST00000531857 ZNF668Q96K58 619 aaPredicted RBP19.63■□□□□ 0.73
PKP3-208ENST00000531857 ADAMTS10Q9H324 1103 aa19.63■□□□□ 0.73
PKP3-208ENST00000531857 TBC1D22BQ9NU19 505 aa19.63■□□□□ 0.73
PKP3-208ENST00000531857 GABBR1Q9UBS5 961 aa19.63■□□□□ 0.73
PKP3-208ENST00000531857 ADD1P35611 737 aaKnown RBP19.62■□□□□ 0.73
PKP3-208ENST00000531857 NLRP11P59045 1033 aaKnown RBP19.62■□□□□ 0.73
PKP3-208ENST00000531857 PFKFB3Q16875 520 aaPredicted RBP19.62■□□□□ 0.73
PKP3-208ENST00000531857 EFCAB12Q6NXP0 572 aa19.62■□□□□ 0.73
PKP3-208ENST00000531857 LRRC71Q8N4P6 559 aa19.62■□□□□ 0.73
PKP3-208ENST00000531857 LINC01465Q8N7H1 131 aa19.62■□□□□ 0.73
PKP3-208ENST00000531857 PRRX2Q99811 253 aa19.62■□□□□ 0.73
PKP3-208ENST00000531857 PUF60Q9UHX1 559 aaKnown RBP19.62■□□□□ 0.73
PKP3-208ENST00000531857 PLXNA3P51805 1871 aa19.62■□□□□ 0.73
PKP3-208ENST00000531857 PSAPP07602 524 aa19.61■□□□□ 0.73
PKP3-208ENST00000531857 SRGAP2BP0DMP2 458 aa19.61■□□□□ 0.73
PKP3-208ENST00000531857 CLLU1OSQ5K130 101 aa19.61■□□□□ 0.73
PKP3-208ENST00000531857 ECHDC2Q86YB7 292 aa19.61■□□□□ 0.73
PKP3-208ENST00000531857 SMAP1Q8IYB5 467 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 471.9 ms