RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 FAM177A1Q8N128 213 aaPredicted RBP19.01■□□□□ 0.63
CPSF1-207ENST00000531727 LINC01465Q8N7H1 131 aa19.01■□□□□ 0.63
CPSF1-207ENST00000531727 KHSRPQ92945 711 aaKnown RBP eCLIP19.01■□□□□ 0.63
CPSF1-207ENST00000531727 LARP6Q9BRS8 491 aaKnown RBP19.01■□□□□ 0.63
CPSF1-207ENST00000531727 TEKT3Q9BXF9 490 aa19.01■□□□□ 0.63
CPSF1-207ENST00000531727 UPF3BQ9BZI7 483 aaKnown RBP19.01■□□□□ 0.63
CPSF1-207ENST00000531727 UNC45AQ9H3U1 944 aa19.01■□□□□ 0.63
CPSF1-207ENST00000531727 EPHX3Q9H6B9 360 aa19.01■□□□□ 0.63
CPSF1-207ENST00000531727 FNDC1Q4ZHG4 1894 aaPredicted RBP19.01■□□□□ 0.63
CPSF1-207ENST00000531727 C9IYK1 514 aa19■□□□□ 0.63
CPSF1-207ENST00000531727 ITGB1P05556 798 aa19■□□□□ 0.63
CPSF1-207ENST00000531727 IBSPP21815 317 aaPredicted RBP19■□□□□ 0.63
CPSF1-207ENST00000531727 LTBRP36941 435 aa19■□□□□ 0.63
CPSF1-207ENST00000531727 JAK3P52333 1124 aa19■□□□□ 0.63
CPSF1-207ENST00000531727 PRKCEQ02156 737 aa19■□□□□ 0.63
CPSF1-207ENST00000531727 CAMK1Q14012 370 aa19■□□□□ 0.63
CPSF1-207ENST00000531727 Q4G0T1 1027 aa19■□□□□ 0.63
CPSF1-207ENST00000531727 EFCAB12Q6NXP0 572 aa19■□□□□ 0.63
CPSF1-207ENST00000531727 CPLX2Q6PUV4 134 aaKnown RBP19■□□□□ 0.63
CPSF1-207ENST00000531727 SLC24A5Q71RS6 500 aa19■□□□□ 0.63
CPSF1-207ENST00000531727 GJD3Q8N144 294 aa19■□□□□ 0.63
CPSF1-207ENST00000531727 DAGLBQ8NCG7 672 aa19■□□□□ 0.63
CPSF1-207ENST00000531727 SPPL3Q8TCT6 385 aa19■□□□□ 0.63
CPSF1-207ENST00000531727 NRBP2Q9NSY0 501 aa19■□□□□ 0.63
CPSF1-207ENST00000531727 FAM50BQ9Y247 325 aa19■□□□□ 0.63
CPSF1-207ENST00000531727 CYP3A7-CYP3A51PA0A087WV96 503 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 M0R2N6 131 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 CHMP2AO43633 222 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 CSPG5O95196 566 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 CYP3A7P24462 503 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 DNAJB1P25685 340 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 TMOD1P28289 359 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 STK3Q13188 491 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 UGCGQ16739 394 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 ZNF710Q8N1W2 664 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 KLHL23Q8NBE8 558 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 RDM1Q8NG50 284 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 MAP7D2Q96T17 732 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 PDRG1Q9NUG6 133 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 AKT3Q9Y243 479 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 PLXNA4Q9HCM2 1894 aa18.99■□□□□ 0.63
CPSF1-207ENST00000531727 PSMD10O75832 226 aa18.98■□□□□ 0.63
CPSF1-207ENST00000531727 TDP2O95551 362 aa18.98■□□□□ 0.63
CPSF1-207ENST00000531727 NLRP11P59045 1033 aaKnown RBP18.98■□□□□ 0.63
CPSF1-207ENST00000531727 FAM189BP81408 668 aa18.98■□□□□ 0.63
CPSF1-207ENST00000531727 DSC3Q14574 896 aa18.98■□□□□ 0.63
CPSF1-207ENST00000531727 NPY5RQ15761 445 aa18.98■□□□□ 0.63
CPSF1-207ENST00000531727 GALNT17Q6IS24 598 aa18.98■□□□□ 0.63
CPSF1-207ENST00000531727 LRRC71Q8N4P6 559 aa18.98■□□□□ 0.63
CPSF1-207ENST00000531727 POF1BQ8WVV4 589 aa18.98■□□□□ 0.63
CPSF1-207ENST00000531727 GJA10Q969M2 543 aa18.98■□□□□ 0.63
CPSF1-207ENST00000531727 AIFM3Q96NN9 605 aa18.98■□□□□ 0.63
CPSF1-207ENST00000531727 ADAMTS10Q9H324 1103 aa18.98■□□□□ 0.63
CPSF1-207ENST00000531727 TMEM161AQ9NX61 479 aa18.98■□□□□ 0.63
CPSF1-207ENST00000531727 RAPGEFL1Q9UHV5 662 aa18.98■□□□□ 0.63
CPSF1-207ENST00000531727 TBKBP1A7MCY6 615 aa18.97■□□□□ 0.63
CPSF1-207ENST00000531727 PI4K2BG5E9Z4 385 aa18.97■□□□□ 0.63
CPSF1-207ENST00000531727 GTF2F1P35269 517 aaKnown RBP eCLIP18.97■□□□□ 0.63
CPSF1-207ENST00000531727 FAM102BQ5T8I3 360 aa18.97■□□□□ 0.63
CPSF1-207ENST00000531727 MOXD1Q6UVY6 613 aa18.97■□□□□ 0.63
CPSF1-207ENST00000531727 B3GNT9Q6UX72 402 aa18.97■□□□□ 0.63
CPSF1-207ENST00000531727 MIER3Q7Z3K6 550 aa18.97■□□□□ 0.63
CPSF1-207ENST00000531727 PPP2R3CQ969Q6 453 aa18.97■□□□□ 0.63
CPSF1-207ENST00000531727 MBOAT7Q96N66 472 aa18.97■□□□□ 0.63
CPSF1-207ENST00000531727 IGFLR1Q9H665 355 aa18.97■□□□□ 0.63
CPSF1-207ENST00000531727 ELAC1Q9H777 363 aaKnown RBP18.97■□□□□ 0.63
CPSF1-207ENST00000531727 ATP6V0A4Q9HBG4 840 aa18.97■□□□□ 0.63
CPSF1-207ENST00000531727 PRKAG3Q9UGI9 489 aa18.97■□□□□ 0.63
CPSF1-207ENST00000531727 NEFLP07196 543 aa18.96■□□□□ 0.63
CPSF1-207ENST00000531727 SSTR3P32745 418 aaPredicted RBP18.96■□□□□ 0.63
CPSF1-207ENST00000531727 IRS1P35568 1242 aa18.96■□□□□ 0.63
CPSF1-207ENST00000531727 DLX2Q07687 328 aaPredicted RBP18.96■□□□□ 0.63
CPSF1-207ENST00000531727 NONOQ15233 471 aaKnown RBP eCLIP18.96■□□□□ 0.63
CPSF1-207ENST00000531727 TARBP2Q15633 366 aaKnown RBP18.96■□□□□ 0.63
CPSF1-207ENST00000531727 TMEM31Q5JXX7 168 aa18.96■□□□□ 0.63
CPSF1-207ENST00000531727 SPOUT1Q5T280 376 aaKnown RBP18.96■□□□□ 0.63
CPSF1-207ENST00000531727 ETNPPLQ8TBG4 499 aa18.96■□□□□ 0.63
CPSF1-207ENST00000531727 LRFN3Q9BTN0 628 aa18.96■□□□□ 0.63
CPSF1-207ENST00000531727 AAASQ9NRG9 546 aa18.96■□□□□ 0.63
CPSF1-207ENST00000531727 PCDHB12Q9Y5F1 795 aa18.96■□□□□ 0.63
CPSF1-207ENST00000531727 LINC01565O15544 149 aa18.95■□□□□ 0.62
CPSF1-207ENST00000531727 TBX10O75333 385 aa18.95■□□□□ 0.62
CPSF1-207ENST00000531727 CDKL5O76039 1030 aa18.95■□□□□ 0.62
CPSF1-207ENST00000531727 FGFR1P11362 822 aa18.95■□□□□ 0.62
CPSF1-207ENST00000531727 EIF4BP23588 611 aaKnown RBP18.95■□□□□ 0.62
CPSF1-207ENST00000531727 GPC3P51654 580 aa18.95■□□□□ 0.62
CPSF1-207ENST00000531727 UBE3AQ05086 875 aa18.95■□□□□ 0.62
CPSF1-207ENST00000531727 TBC1D8BQ0IIM8 1120 aa18.95■□□□□ 0.62
CPSF1-207ENST00000531727 SCRN1Q12765 414 aa18.95■□□□□ 0.62
CPSF1-207ENST00000531727 ADAM15Q13444 863 aa18.95■□□□□ 0.62
CPSF1-207ENST00000531727 KRT25Q7Z3Z0 450 aa18.95■□□□□ 0.62
CPSF1-207ENST00000531727 ADGRD2Q7Z7M1 963 aa18.95■□□□□ 0.62
CPSF1-207ENST00000531727 SEPT9Q9UHD8 586 aaPredicted RBP18.95■□□□□ 0.62
CPSF1-207ENST00000531727 GPR37L1O60883 481 aa18.94■□□□□ 0.62
CPSF1-207ENST00000531727 ZP2Q05996 745 aa18.94■□□□□ 0.62
CPSF1-207ENST00000531727 CLUL1Q15846 466 aa18.94■□□□□ 0.62
CPSF1-207ENST00000531727 XKR3Q5GH77 459 aa18.94■□□□□ 0.62
CPSF1-207ENST00000531727 PHF20Q9BVI0 1012 aa18.94■□□□□ 0.62
CPSF1-207ENST00000531727 NIFKQ9BYG3 293 aaKnown RBP18.94■□□□□ 0.62
CPSF1-207ENST00000531727 CWH43Q9H720 699 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms