RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 HAS3O00219 553 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 HIP1RO75146 1068 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 TBCAO75347 108 aaKnown RBP21.13■□□□□ 0.97
SMPD1-205ENST00000531303 ACLYP53396 1101 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 EMC2Q15006 297 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 GRIK4Q16099 956 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 KMT5BQ4FZB7 885 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 RBM43Q6ZSC3 357 aaKnown RBP21.13■□□□□ 0.97
SMPD1-205ENST00000531303 CEP89Q96ST8 783 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 MCOLN1Q9GZU1 580 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 SUGCTQ9HAC7 445 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 ATP6V0A4Q9HBG4 840 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 GPRC5CQ9NQ84 441 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 PANK4Q9NVE7 773 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 MAN1B1Q9UKM7 699 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 KLRC4O43908 158 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 DGAT1O75907 488 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 FAM13AO94988 1023 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 RFC5P40937 340 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 NBPF20Q3BBV1 942 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 SASS6Q6UVJ0 657 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 C7orf31Q8N865 590 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 SLC7A3Q8WY07 619 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 HPS3Q969F9 1004 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 TMEM143Q96AN5 459 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 EXOC1Q9NV70 894 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 KCND2Q9NZV8 630 aa21.13■□□□□ 0.97
SMPD1-205ENST00000531303 SCN10AQ9Y5Y9 1956 aa21.12■□□□□ 0.97
SMPD1-205ENST00000531303 KBTBD13C9JR72 458 aa21.12■□□□□ 0.97
SMPD1-205ENST00000531303 TFRCP02786 760 aaKnown RBP21.12■□□□□ 0.97
SMPD1-205ENST00000531303 GUCY2CP25092 1073 aa21.12■□□□□ 0.97
SMPD1-205ENST00000531303 KLRC1P26715 233 aa21.12■□□□□ 0.97
SMPD1-205ENST00000531303 SARSP49591 514 aaKnown RBP21.12■□□□□ 0.97
SMPD1-205ENST00000531303 FAM47CQ5HY64 1035 aa21.12■□□□□ 0.97
SMPD1-205ENST00000531303 CNNM4Q6P4Q7 775 aa21.12■□□□□ 0.97
SMPD1-205ENST00000531303 UNC13DQ70J99 1090 aa21.12■□□□□ 0.97
SMPD1-205ENST00000531303 CCDC65Q8IXS2 484 aa21.12■□□□□ 0.97
SMPD1-205ENST00000531303 METTL13Q8N6R0 699 aa21.12■□□□□ 0.97
SMPD1-205ENST00000531303 CCDC47Q96A33 483 aaKnown RBP21.12■□□□□ 0.97
SMPD1-205ENST00000531303 GSDMAQ96QA5 445 aa21.12■□□□□ 0.97
SMPD1-205ENST00000531303 DHX33Q9H6R0 707 aaKnown RBP21.12■□□□□ 0.97
SMPD1-205ENST00000531303 XPNPEP1Q9NQW7 623 aa21.12■□□□□ 0.97
SMPD1-205ENST00000531303 TBC1D7Q9P0N9 293 aa21.12■□□□□ 0.97
SMPD1-205ENST00000531303 HDAC6Q9UBN7 1215 aa21.12■□□□□ 0.97
SMPD1-205ENST00000531303 TUBE1Q9UJT0 475 aa21.12■□□□□ 0.97
SMPD1-205ENST00000531303 COASYQ13057 564 aa21.11■□□□□ 0.97
SMPD1-205ENST00000531303 HERC4Q5GLZ8 1057 aaPredicted RBP21.11■□□□□ 0.97
SMPD1-205ENST00000531303 LRRC71Q8N4P6 559 aa21.11■□□□□ 0.97
SMPD1-205ENST00000531303 MYCT1Q8N699 235 aa21.11■□□□□ 0.97
SMPD1-205ENST00000531303 U2AF1L4Q8WU68 220 aaKnown RBP21.11■□□□□ 0.97
SMPD1-205ENST00000531303 LMBR1Q8WVP7 490 aa21.11■□□□□ 0.97
SMPD1-205ENST00000531303 TSEN34Q9BSV6 310 aaKnown RBP21.11■□□□□ 0.97
SMPD1-205ENST00000531303 PDLIM7Q9NR12 457 aa21.11■□□□□ 0.97
SMPD1-205ENST00000531303 COL1A2P08123 1366 aa21.1■□□□□ 0.97
SMPD1-205ENST00000531303 PVALEFA0A1B0GWK0 134 aa21.1■□□□□ 0.97
SMPD1-205ENST00000531303 MOXD2PA6NHM9 499 aa21.1■□□□□ 0.97
SMPD1-205ENST00000531303 MAFO75444 373 aaPredicted RBP21.1■□□□□ 0.97
SMPD1-205ENST00000531303 ZNF200P98182 395 aaPredicted RBP21.1■□□□□ 0.97
SMPD1-205ENST00000531303 MAPK7Q13164 816 aa21.1■□□□□ 0.97
SMPD1-205ENST00000531303 NT5DC1Q5TFE4 455 aa21.1■□□□□ 0.97
SMPD1-205ENST00000531303 EFCAB12Q6NXP0 572 aa21.1■□□□□ 0.97
SMPD1-205ENST00000531303 SFR1Q86XK3 245 aa21.1■□□□□ 0.97
SMPD1-205ENST00000531303 DAW1Q8N136 415 aa21.1■□□□□ 0.97
SMPD1-205ENST00000531303 MCPH1Q8NEM0 835 aa21.1■□□□□ 0.97
SMPD1-205ENST00000531303 SPATA20Q8TB22 786 aa21.1■□□□□ 0.97
SMPD1-205ENST00000531303 POLR3FQ9H1D9 316 aaPredicted RBP21.1■□□□□ 0.97
SMPD1-205ENST00000531303 RMND1Q9NWS8 449 aa21.1■□□□□ 0.97
SMPD1-205ENST00000531303 OGDHLQ9ULD0 1010 aa21.1■□□□□ 0.97
SMPD1-205ENST00000531303 PPME1Q9Y570 386 aa21.1■□□□□ 0.97
SMPD1-205ENST00000531303 COL4A3BPQ9Y5P4 624 aa21.1■□□□□ 0.97
SMPD1-205ENST00000531303 KIAA0100Q14667 2235 aaKnown RBP21.1■□□□□ 0.97
SMPD1-205ENST00000531303 NRCAMQ92823 1304 aa21.09■□□□□ 0.97
SMPD1-205ENST00000531303 RRN3P2A6NIE6 340 aa21.09■□□□□ 0.97
SMPD1-205ENST00000531303 SGPL1O95470 568 aa21.09■□□□□ 0.97
SMPD1-205ENST00000531303 C22orf31O95567 290 aa21.09■□□□□ 0.97
SMPD1-205ENST00000531303 GJB1P08034 283 aa21.09■□□□□ 0.97
SMPD1-205ENST00000531303 DRP2Q13474 957 aa21.09■□□□□ 0.97
SMPD1-205ENST00000531303 HIC1Q14526 733 aa21.09■□□□□ 0.97
SMPD1-205ENST00000531303 MARCH8Q5T0T0 291 aa21.09■□□□□ 0.97
SMPD1-205ENST00000531303 MTHFD1LQ6UB35 978 aa21.09■□□□□ 0.97
SMPD1-205ENST00000531303 GLT1D1Q96MS3 346 aa21.09■□□□□ 0.97
SMPD1-205ENST00000531303 PARVGQ9HBI0 331 aa21.09■□□□□ 0.97
SMPD1-205ENST00000531303 ODF2LQ9ULJ1 636 aa21.09■□□□□ 0.97
SMPD1-205ENST00000531303 A0A1W2PQ45 241 aaPredicted RBP21.08■□□□□ 0.97
SMPD1-205ENST00000531303 A0A1W2PQY0 241 aa21.08■□□□□ 0.97
SMPD1-205ENST00000531303 C17orf102A2RUQ5 167 aa21.08■□□□□ 0.97
SMPD1-205ENST00000531303 DNM1LO00429 736 aa21.08■□□□□ 0.97
SMPD1-205ENST00000531303 MAGEB2O15479 319 aa21.08■□□□□ 0.97
SMPD1-205ENST00000531303 CABYRO75952 493 aa21.08■□□□□ 0.97
SMPD1-205ENST00000531303 CLCN3P51790 818 aa21.08■□□□□ 0.97
SMPD1-205ENST00000531303 TYRO3Q06418 890 aa21.08■□□□□ 0.97
SMPD1-205ENST00000531303 ITGA7Q13683 1181 aa21.08■□□□□ 0.97
SMPD1-205ENST00000531303 KCNB1Q14721 858 aa21.08■□□□□ 0.97
SMPD1-205ENST00000531303 SMYD4Q8IYR2 804 aaPredicted RBP21.08■□□□□ 0.97
SMPD1-205ENST00000531303 DRC1Q96MC2 740 aa21.08■□□□□ 0.97
SMPD1-205ENST00000531303 TIPINQ9BVW5 301 aa21.08■□□□□ 0.97
SMPD1-205ENST00000531303 SLC39A2Q9NP94 309 aa21.08■□□□□ 0.97
SMPD1-205ENST00000531303 PHF24Q9UPV7 400 aa21.08■□□□□ 0.97
SMPD1-205ENST00000531303 GDAQ9Y2T3 454 aa21.08■□□□□ 0.97
SMPD1-205ENST00000531303 GRIN2DO15399 1336 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms