RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 SUGCTQ9HAC7 445 aa21.26■□□□□ 0.99
PACSIN3-208ENST00000531226 ZBTB39O15060 712 aa21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 VTNP04004 478 aa21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 RPA1P27694 616 aa21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 KCNJ6P48051 423 aa21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 TTC3P53804 2025 aa21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 WDR5P61964 334 aaKnown RBP21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 MKRN4PQ13434 485 aaPredicted RBP21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 IL17AQ16552 155 aa21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 XKR9Q5GH70 373 aa21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 ARL6IP4Q66PJ3 421 aaKnown RBP21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 DTHD1Q6ZMT9 781 aa21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 ZNF579Q8NAF0 562 aaKnown RBP21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 USP38Q8NB14 1042 aa21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 ANKEF1Q9NU02 776 aa21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 LRWD1Q9UFC0 647 aa21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 AKT3Q9Y243 479 aa21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 STK24Q9Y6E0 443 aa21.25■□□□□ 0.99
PACSIN3-208ENST00000531226 BMP15O95972 392 aa21.24■□□□□ 0.99
PACSIN3-208ENST00000531226 PDIA4P13667 645 aaKnown RBP21.24■□□□□ 0.99
PACSIN3-208ENST00000531226 RFC5P40937 340 aa21.24■□□□□ 0.99
PACSIN3-208ENST00000531226 POLGP54098 1239 aaPredicted RBP21.24■□□□□ 0.99
PACSIN3-208ENST00000531226 DRP2Q13474 957 aa21.24■□□□□ 0.99
PACSIN3-208ENST00000531226 GPR153Q6NV75 609 aa21.24■□□□□ 0.99
PACSIN3-208ENST00000531226 EXOC8Q8IYI6 725 aa21.24■□□□□ 0.99
PACSIN3-208ENST00000531226 ZNF710Q8N1W2 664 aa21.24■□□□□ 0.99
PACSIN3-208ENST00000531226 SLC7A3Q8WY07 619 aa21.24■□□□□ 0.99
PACSIN3-208ENST00000531226 PPP1R16BQ96T49 567 aa21.24■□□□□ 0.99
PACSIN3-208ENST00000531226 ZSCAN16Q9H4T2 348 aaPredicted RBP21.24■□□□□ 0.99
PACSIN3-208ENST00000531226 DHX33Q9H6R0 707 aaKnown RBP21.24■□□□□ 0.99
PACSIN3-208ENST00000531226 AGO3Q9H9G7 860 aaKnown RBP21.24■□□□□ 0.99
PACSIN3-208ENST00000531226 GINS2Q9Y248 185 aa21.24■□□□□ 0.99
PACSIN3-208ENST00000531226 MYH11P35749 1972 aa21.23■□□□□ 0.99
PACSIN3-208ENST00000531226 GRXCR1A8MXD5 290 aa21.23■□□□□ 0.99
PACSIN3-208ENST00000531226 GPR32O75388 356 aa21.23■□□□□ 0.99
PACSIN3-208ENST00000531226 XRCC6P12956 609 aaKnown RBP eCLIP21.23■□□□□ 0.99
PACSIN3-208ENST00000531226 ATP2A2P16615 1042 aaKnown RBP21.23■□□□□ 0.99
PACSIN3-208ENST00000531226 MUTP22033 750 aa21.23■□□□□ 0.99
PACSIN3-208ENST00000531226 KIZQ2M2Z5 673 aa21.23■□□□□ 0.99
PACSIN3-208ENST00000531226 SPRYD3Q8NCJ5 442 aa21.23■□□□□ 0.99
PACSIN3-208ENST00000531226 PHOSPHO2Q8TCD6 241 aa21.23■□□□□ 0.99
PACSIN3-208ENST00000531226 CDHR5Q9HBB8 845 aa21.23■□□□□ 0.99
PACSIN3-208ENST00000531226 MYO9BQ13459 2157 aa21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 CD52P31358 61 aa21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 CCT6AP40227 531 aaKnown RBP21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 RARRES1P49788 294 aa21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 DNM2P50570 870 aa21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 GPC3P51654 580 aa21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 CRYBB1P53674 252 aaPredicted RBP21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 NLRP11P59045 1033 aaKnown RBP21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 SF3A1Q15459 793 aaKnown RBP21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 FAM173BQ6P4H8 233 aa21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 POTEGQ6S5H5 508 aa21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 SNX29Q8TEQ0 813 aa21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 PIGOQ8TEQ8 1089 aa21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 TMEM40Q8WWA1 233 aa21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 CCDC43Q96MW1 224 aaKnown RBP21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 OSMRQ99650 979 aa21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 ADAMTS10Q9H324 1103 aa21.22■□□□□ 0.99
PACSIN3-208ENST00000531226 VWA3AA6NCI4 1184 aa21.21■□□□□ 0.99
PACSIN3-208ENST00000531226 GAS2O43903 313 aaKnown RBP21.21■□□□□ 0.99
PACSIN3-208ENST00000531226 DEFB103AP81534 67 aa21.21■□□□□ 0.99
PACSIN3-208ENST00000531226 PAK2Q13177 524 aa21.21■□□□□ 0.99
PACSIN3-208ENST00000531226 EMC2Q15006 297 aa21.21■□□□□ 0.99
PACSIN3-208ENST00000531226 NACC1Q96RE7 527 aa21.21■□□□□ 0.99
PACSIN3-208ENST00000531226 MTRQ99707 1265 aa21.21■□□□□ 0.99
PACSIN3-208ENST00000531226 PBX4Q9BYU1 374 aa21.21■□□□□ 0.99
PACSIN3-208ENST00000531226 BMP2KQ9NSY1 1161 aaPredicted RBP21.21■□□□□ 0.99
PACSIN3-208ENST00000531226 DBR1Q9UK59 544 aaKnown RBP21.21■□□□□ 0.99
PACSIN3-208ENST00000531226 NLRC5Q86WI3 1866 aa21.2■□□□□ 0.98
PACSIN3-208ENST00000531226 TCHHQ07283 1943 aa21.2■□□□□ 0.98
PACSIN3-208ENST00000531226 PP2D1A8MPX8 630 aa21.2■□□□□ 0.98
PACSIN3-208ENST00000531226 DNAJB2P25686 324 aa21.2■□□□□ 0.98
PACSIN3-208ENST00000531226 PBX2P40425 430 aa21.2■□□□□ 0.98
PACSIN3-208ENST00000531226 CDC42EP1Q00587 391 aa21.2■□□□□ 0.98
PACSIN3-208ENST00000531226 RAB30Q15771 203 aa21.2■□□□□ 0.98
PACSIN3-208ENST00000531226 ECM1Q16610 540 aa21.2■□□□□ 0.98
PACSIN3-208ENST00000531226 KRT79Q5XKE5 535 aa21.2■□□□□ 0.98
PACSIN3-208ENST00000531226 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.2■□□□□ 0.98
PACSIN3-208ENST00000531226 SUCLA2Q9P2R7 463 aaPredicted RBP21.2■□□□□ 0.98
PACSIN3-208ENST00000531226 PADI3Q9ULW8 664 aa21.2■□□□□ 0.98
PACSIN3-208ENST00000531226 NOC2LQ9Y3T9 749 aaKnown RBP21.2■□□□□ 0.98
PACSIN3-208ENST00000531226 CLIC4Q9Y696 253 aa21.2■□□□□ 0.98
PACSIN3-208ENST00000531226 LAMA2P24043 3122 aaKnown RBP21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 A0A087WWV3 80 aa21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 RPS6KA5O75582 802 aa21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 DGAT1O75907 488 aa21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 AMHP03971 560 aa21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 BECN1Q14457 450 aa21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 PTPAQ15257 358 aa21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 ODR4Q5SWX8 454 aa21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 HERC6Q8IVU3 1022 aa21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 TCP11Q8WWU5 503 aa21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 ZNF668Q96K58 619 aaPredicted RBP21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 SCLT1Q96NL6 688 aa21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 MMTAG2Q9BU76 263 aaKnown RBP21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 FTHL17Q9BXU8 183 aa21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 ATP6V0A4Q9HBG4 840 aa21.19■□□□□ 0.98
PACSIN3-208ENST00000531226 ERVK-5Q9HDB9 667 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms