RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ITGB1P05556 798 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 IBSPP21815 317 aaPredicted RBP17.83■□□□□ 0.44
CPSF1-205ENST00000531042 SFNP31947 248 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 LTBRP36941 435 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 HYAL1Q12794 435 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 CTC1Q2NKJ3 1217 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 Q4G0T1 1027 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 LRCH2Q5VUJ6 765 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 EFCAB12Q6NXP0 572 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 SLC24A5Q71RS6 500 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 FAM228AQ86W67 206 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 BLIDQ8IZY5 108 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 LINC01465Q8N7H1 131 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 KLHL23Q8NBE8 558 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 SPPL3Q8TCT6 385 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 TEKT3Q9BXF9 490 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 NRBP2Q9NSY0 501 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 RNF216Q9NWF9 866 aaPredicted RBP17.83■□□□□ 0.44
CPSF1-205ENST00000531042 RAPGEFL1Q9UHV5 662 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 CYP3A7-CYP3A51PA0A087WV96 503 aa17.82■□□□□ 0.44
CPSF1-205ENST00000531042 CHMP2AO43633 222 aa17.82■□□□□ 0.44
CPSF1-205ENST00000531042 OATP04181 439 aa17.82■□□□□ 0.44
CPSF1-205ENST00000531042 CYP3A7P24462 503 aa17.82■□□□□ 0.44
CPSF1-205ENST00000531042 DNAJB1P25685 340 aa17.82■□□□□ 0.44
CPSF1-205ENST00000531042 CLCN3P51790 818 aa17.82■□□□□ 0.44
CPSF1-205ENST00000531042 JAK3P52333 1124 aa17.82■□□□□ 0.44
CPSF1-205ENST00000531042 STK3Q13188 491 aa17.82■□□□□ 0.44
CPSF1-205ENST00000531042 NPY5RQ15761 445 aa17.82■□□□□ 0.44
CPSF1-205ENST00000531042 UGCGQ16739 394 aa17.82■□□□□ 0.44
CPSF1-205ENST00000531042 FAM177A1Q8N128 213 aaPredicted RBP17.82■□□□□ 0.44
CPSF1-205ENST00000531042 GJD3Q8N144 294 aa17.82■□□□□ 0.44
CPSF1-205ENST00000531042 DAGLBQ8NCG7 672 aa17.82■□□□□ 0.44
CPSF1-205ENST00000531042 GJA10Q969M2 543 aa17.82■□□□□ 0.44
CPSF1-205ENST00000531042 UNC45AQ9H3U1 944 aa17.82■□□□□ 0.44
CPSF1-205ENST00000531042 PSMD10O75832 226 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 CSPG5O95196 566 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 TMOD1P28289 359 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 GTF2F1P35269 517 aaKnown RBP eCLIP17.81■□□□□ 0.442e-7■■■■■ 67.6
CPSF1-205ENST00000531042 NLRP11P59045 1033 aaKnown RBP17.81■□□□□ 0.44
CPSF1-205ENST00000531042 FAM189BP81408 668 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 PRKCEQ02156 737 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 DSC3Q14574 896 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 FAM102BQ5T8I3 360 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 GALNT17Q6IS24 598 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 CPLX2Q6PUV4 134 aaKnown RBP17.81■□□□□ 0.44
CPSF1-205ENST00000531042 LRRC71Q8N4P6 559 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 AIFM3Q96NN9 605 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 MAP7D2Q96T17 732 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 ADAMTS10Q9H324 1103 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 PDRG1Q9NUG6 133 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 AKT3Q9Y243 479 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 FAM50BQ9Y247 325 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 PLXNA4Q9HCM2 1894 aa17.81■□□□□ 0.44
CPSF1-205ENST00000531042 TBKBP1A7MCY6 615 aa17.8■□□□□ 0.44
CPSF1-205ENST00000531042 PI4K2BG5E9Z4 385 aa17.8■□□□□ 0.44
CPSF1-205ENST00000531042 TDP2O95551 362 aa17.8■□□□□ 0.44
CPSF1-205ENST00000531042 DLX2Q07687 328 aaPredicted RBP17.8■□□□□ 0.44
CPSF1-205ENST00000531042 B3GNT9Q6UX72 402 aa17.8■□□□□ 0.44
CPSF1-205ENST00000531042 ZNF710Q8N1W2 664 aa17.8■□□□□ 0.44
CPSF1-205ENST00000531042 RDM1Q8NG50 284 aa17.8■□□□□ 0.44
CPSF1-205ENST00000531042 POF1BQ8WVV4 589 aa17.8■□□□□ 0.44
CPSF1-205ENST00000531042 MBOAT7Q96N66 472 aa17.8■□□□□ 0.44
CPSF1-205ENST00000531042 IGFLR1Q9H665 355 aa17.8■□□□□ 0.44
CPSF1-205ENST00000531042 ELAC1Q9H777 363 aaKnown RBP17.8■□□□□ 0.44
CPSF1-205ENST00000531042 TMEM161AQ9NX61 479 aa17.8■□□□□ 0.44
CPSF1-205ENST00000531042 EIF4BP23588 611 aaKnown RBP17.79■□□□□ 0.44
CPSF1-205ENST00000531042 SSTR3P32745 418 aaPredicted RBP17.79■□□□□ 0.44
CPSF1-205ENST00000531042 IRS1P35568 1242 aa17.79■□□□□ 0.44
CPSF1-205ENST00000531042 ADAM15Q13444 863 aa17.79■□□□□ 0.44
CPSF1-205ENST00000531042 TARBP2Q15633 366 aaKnown RBP17.79■□□□□ 0.44
CPSF1-205ENST00000531042 MOXD1Q6UVY6 613 aa17.79■□□□□ 0.44
CPSF1-205ENST00000531042 MIER3Q7Z3K6 550 aa17.79■□□□□ 0.44
CPSF1-205ENST00000531042 LRFN3Q9BTN0 628 aa17.79■□□□□ 0.44
CPSF1-205ENST00000531042 ATP6V0A4Q9HBG4 840 aa17.79■□□□□ 0.44
CPSF1-205ENST00000531042 PCDHB12Q9Y5F1 795 aa17.79■□□□□ 0.44
CPSF1-205ENST00000531042 C5orf42Q9H799 3197 aa17.79■□□□□ 0.44
CPSF1-205ENST00000531042 LINC01565O15544 149 aa17.78■□□□□ 0.44
CPSF1-205ENST00000531042 GPR37L1O60883 481 aa17.78■□□□□ 0.44
CPSF1-205ENST00000531042 TBC1D8BQ0IIM8 1120 aa17.78■□□□□ 0.44
CPSF1-205ENST00000531042 SCRN1Q12765 414 aa17.78■□□□□ 0.44
CPSF1-205ENST00000531042 NONOQ15233 471 aaKnown RBP eCLIP17.78■□□□□ 0.44
CPSF1-205ENST00000531042 TMEM31Q5JXX7 168 aa17.78■□□□□ 0.44
CPSF1-205ENST00000531042 SPOUT1Q5T280 376 aaKnown RBP17.78■□□□□ 0.44
CPSF1-205ENST00000531042 KRT25Q7Z3Z0 450 aa17.78■□□□□ 0.44
CPSF1-205ENST00000531042 ADGRD2Q7Z7M1 963 aa17.78■□□□□ 0.44
CPSF1-205ENST00000531042 ETNPPLQ8TBG4 499 aa17.78■□□□□ 0.44
CPSF1-205ENST00000531042 PPP2R3CQ969Q6 453 aa17.78■□□□□ 0.44
CPSF1-205ENST00000531042 NIFKQ9BYG3 293 aaKnown RBP17.78■□□□□ 0.44
CPSF1-205ENST00000531042 C11orf16Q9NQ32 467 aa17.78■□□□□ 0.44
CPSF1-205ENST00000531042 AAASQ9NRG9 546 aa17.78■□□□□ 0.44
CPSF1-205ENST00000531042 TYW1Q9NV66 732 aaKnown RBP17.78■□□□□ 0.44
CPSF1-205ENST00000531042 PRKAG3Q9UGI9 489 aa17.78■□□□□ 0.44
CPSF1-205ENST00000531042 KCNJ14Q9UNX9 436 aa17.78■□□□□ 0.44
CPSF1-205ENST00000531042 MBTPS2O43462 519 aa17.77■□□□□ 0.44
CPSF1-205ENST00000531042 TBX10O75333 385 aa17.77■□□□□ 0.44
CPSF1-205ENST00000531042 CDKL5O76039 1030 aa17.77■□□□□ 0.44
CPSF1-205ENST00000531042 STBD1O95210 358 aa17.77■□□□□ 0.44
CPSF1-205ENST00000531042 NEFLP07196 543 aa17.77■□□□□ 0.44
CPSF1-205ENST00000531042 FGFR1P11362 822 aa17.77■□□□□ 0.44
CPSF1-205ENST00000531042 ZSCAN20P17040 1043 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms