RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 HABP4Q5JVS0 413 aaKnown RBP8.72□□□□□ -1.01
CTNND1-220ENST00000529526 ANKRD20A2Q5SQ80 823 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 ANKRD20A1Q5TYW2 823 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 ALS2CLQ60I27 953 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 SLFN12LQ6IEE8 588 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 PPP1R2P3Q6NXS1 205 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 CATSPER4Q7RTX7 472 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 SLC10A4Q96EP9 437 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 CNOT10Q9H9A5 744 aaKnown RBP8.72□□□□□ -1.01
CTNND1-220ENST00000529526 LGALS16A8MUM7 142 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 FOXN1O15353 648 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 HSPA6P17066 643 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 SURF1Q15526 300 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 SNRNP48Q6IEG0 339 aaKnown RBP8.72□□□□□ -1.01
CTNND1-220ENST00000529526 TMEM270Q6UE05 265 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 CXorf38Q8TB03 319 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 DCP1AQ9NPI6 582 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-220ENST00000529526 EPS15L1Q9UBC2 864 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 ABT1Q9ULW3 272 aaKnown RBP8.72□□□□□ -1.01
CTNND1-220ENST00000529526 ZHX2Q9Y6X8 837 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 MAP3K4Q9Y6R4 1608 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 EVI5O60447 810 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 RPS6KA4O75676 772 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 DMTNQ08495 405 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 ZNF667Q5HYK9 610 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 TRIM67Q6ZTA4 783 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 ARMCX2Q7L311 632 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 ADGRF4Q8IZF3 695 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 FGD4Q96M96 766 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 ADAM22Q9P0K1 906 aa8.72□□□□□ -1.01
CTNND1-220ENST00000529526 RPAP1Q9BWH6 1393 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-220ENST00000529526 CCDC151A5D8V7 595 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 PI4K2BG5E9Z4 385 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 LUC7L3O95232 432 aaKnown RBP8.71□□□□□ -1.01
CTNND1-220ENST00000529526 CA4P22748 312 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 GPSM2P81274 684 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 BRINP3Q76B58 766 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 DHX40Q8IX18 779 aaKnown RBP8.71□□□□□ -1.01
CTNND1-220ENST00000529526 RMDN2Q96LZ7 410 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 CD209Q9NNX6 404 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 PACSIN2Q9UNF0 486 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-220ENST00000529526 ZCCHC11Q5TAX3 1644 aaKnown RBP8.71□□□□□ -1.01
CTNND1-220ENST00000529526 STK36Q9NRP7 1315 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 GOLGA8QA0A0J9YX86 632 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 GOLGA8OA6NCC3 632 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 USP27XA6NNY8 438 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 GOLGA8NF8WBI6 632 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 TJP3O95049 919 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 PMLP29590 882 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 YWHAHQ04917 246 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-220ENST00000529526 NSUN2Q08J23 767 aaKnown RBP eCLIP8.71□□□□□ -1.01
CTNND1-220ENST00000529526 KCNH2Q12809 1159 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 ART3Q13508 389 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 ZNF746Q6NUN9 644 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-220ENST00000529526 RHOT2Q8IXI1 618 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 TTC17Q96AE7 1141 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 HEY1Q9Y5J3 304 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 SCINQ9Y6U3 715 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 PREX2Q70Z35 1606 aa8.71□□□□□ -1.01
CTNND1-220ENST00000529526 UTYO14607 1347 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 IQANK1A0A1B0GTG1 560 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 CLDN3O15551 220 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 KITP10721 976 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 PHEXP78562 749 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 CUL1Q13616 776 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 GRM4Q14833 912 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 ZNF699Q32M78 642 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 ARL13BQ3SXY8 428 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 NFRKBQ6P4R8 1299 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 SMIM5Q71RC9 77 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 FMR1NBQ8N0W7 255 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-220ENST00000529526 WRNIP1Q96S55 665 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 ELAC2Q9BQ52 826 aaKnown RBP8.71□□□□□ -1.02
CTNND1-220ENST00000529526 SUDS3Q9H7L9 328 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-220ENST00000529526 HDAC6Q9UBN7 1215 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 FEM1BQ9UK73 627 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 TTC7AQ9ULT0 858 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-220ENST00000529526 CCDC195A0A1B0GUA6 201 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 CCDC144BQ3MJ40 725 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 EFCAB13Q8IY85 973 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 SAAL1Q96ER3 474 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 TRIM4Q9C037 500 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 FAF1Q9UNN5 650 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-220ENST00000529526 MROH7-TTC4A0A0A0MT08 1334 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 NPHP3-ACAD11A0A0J9YXS1 232 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 ASNSP08243 561 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 GPC3P51654 580 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 STXBP2Q15833 593 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 C6orf118Q5T5N4 469 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 NUGGCQ68CJ6 796 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 RHPN2Q8IUC4 686 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 MTRQ99707 1265 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 NUP85Q9BW27 656 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 TXLNGQ9NUQ3 528 aa8.71□□□□□ -1.02
CTNND1-220ENST00000529526 A0A0G2JND7 137 aa8.7□□□□□ -1.02
CTNND1-220ENST00000529526 DENND3A2RUS2 1198 aa8.7□□□□□ -1.02
CTNND1-220ENST00000529526 TEX33O43247 280 aa8.7□□□□□ -1.02
CTNND1-220ENST00000529526 MGEA5O60502 916 aa8.7□□□□□ -1.02
CTNND1-220ENST00000529526 TDP2O95551 362 aa8.7□□□□□ -1.02
CTNND1-220ENST00000529526 ZNF568Q3ZCX4 644 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms