RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 LRRC15Q8TF66 581 aa12.81□□□□□ -0.36
CCDC90B-211ENST00000529073 GUCD1Q96NT3 240 aa12.81□□□□□ -0.36
CCDC90B-211ENST00000529073 TMX1Q9H3N1 280 aa12.81□□□□□ -0.36
CCDC90B-211ENST00000529073 CERS4Q9HA82 394 aa12.81□□□□□ -0.36
CCDC90B-211ENST00000529073 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.81□□□□□ -0.36
CCDC90B-211ENST00000529073 MTMR6Q9Y217 621 aa12.81□□□□□ -0.36
CCDC90B-211ENST00000529073 TRPV2Q9Y5S1 764 aa12.81□□□□□ -0.36
CCDC90B-211ENST00000529073 MYH15Q9Y2K3 1946 aa12.81□□□□□ -0.36
CCDC90B-211ENST00000529073 COL1A2P08123 1366 aa12.81□□□□□ -0.36
CCDC90B-211ENST00000529073 SMIM35A0A1B0GVV1 85 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 EPOPA6NHQ4 379 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 MAP3K13O43283 966 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 GPR32O75388 356 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 GNAT1P11488 350 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 PSMC5P62195 406 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 ZNF484Q5JVG2 852 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 CNKSR3Q6P9H4 555 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 KCNK18Q7Z418 384 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 TPH2Q8IWU9 490 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 SNX21Q969T3 373 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 TMEM143Q96AN5 459 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 SUGCTQ9HAC7 445 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 XPNPEP1Q9NQW7 623 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 PCDHA12Q9UN75 941 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 NOC2LQ9Y3T9 749 aaKnown RBP12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 CLIC4Q9Y696 253 aa12.8□□□□□ -0.36
CCDC90B-211ENST00000529073 RFXAPO00287 272 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 ATP2A2P16615 1042 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 RFC2P35250 354 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 QARSP47897 775 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 SLC26A2P50443 739 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 FOXD4L6Q3SYB3 417 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 XKR3Q5GH77 459 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 FOXD4L3Q6VB84 417 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 FAM228AQ86W67 206 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 CATSPER3Q86XQ3 398 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 SLFN12Q8IYM2 578 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 DEFB123Q8N688 67 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 RDM1Q8NG50 284 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 HSD17B14Q9BPX1 270 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 MMTAG2Q9BU76 263 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 IFIH1Q9BYX4 1025 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 CELF4Q9BZC1 486 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 ADAMTS10Q9H324 1103 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 GPRC5CQ9NQ84 441 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 HCSTQ9UBK5 93 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 AKT3Q9Y243 479 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 SLC4A7Q9Y6M7 1214 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 REV3LO60673 3130 aa12.79□□□□□ -0.36
CCDC90B-211ENST00000529073 UPP2O95045 317 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 P4HBP07237 508 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 CA3P07451 260 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 YWHABP31946 246 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 NLRP11P59045 1033 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 SMAD3P84022 425 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 GRIN2CQ14957 1233 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 TAF2Q6P1X5 1199 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 MAEAQ7L5Y9 396 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 RPAINQ86UA6 219 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 HERC6Q8IVU3 1022 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 RPUSD2Q8IZ73 545 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 MYOCDQ8IZQ8 938 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 ASAP3Q8TDY4 903 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 MYLIPQ8WY64 445 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 FAM167AQ96KS9 214 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 PLIN2Q99541 437 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 NIFKQ9BYG3 293 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 ERVK-5Q9HDB9 667 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 CYP26B1Q9NR63 512 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 MTMR10Q9NXD2 777 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 PADI3Q9ULW8 664 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 NOL7Q9UMY1 257 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 KIAA1671Q9BY89 1806 aa12.78□□□□□ -0.36
CCDC90B-211ENST00000529073 IGKV6-21A0A0C4DH24 114 aa12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 USO1O60763 962 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 BAG4O95429 457 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 GPC3P51654 580 aa12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 ATP2C1P98194 919 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 CEBPZQ03701 1054 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 TBC1D8BQ0IIM8 1120 aa12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 XKR9Q5GH70 373 aa12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 SPECC1Q5M775 1068 aa12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 TSHZ1Q6ZSZ6 1077 aa12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 USP49Q70CQ1 688 aa12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 HSCBQ8IWL3 235 aa12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 TIFAQ96CG3 184 aa12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 CEP170P1Q96L14 293 aa12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 NAP1L4Q99733 375 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 USP20Q9Y2K6 914 aa12.77□□□□□ -0.37
CCDC90B-211ENST00000529073 A0A087WZ62 844 aa12.76□□□□□ -0.37
CCDC90B-211ENST00000529073 MAFO75444 373 aaPredicted RBP12.76□□□□□ -0.37
CCDC90B-211ENST00000529073 PFKMP08237 780 aa12.76□□□□□ -0.37
CCDC90B-211ENST00000529073 TRAPPC10P48553 1259 aa12.76□□□□□ -0.37
CCDC90B-211ENST00000529073 EMC2Q15006 297 aa12.76□□□□□ -0.37
CCDC90B-211ENST00000529073 SF3A1Q15459 793 aaKnown RBP12.76□□□□□ -0.37
CCDC90B-211ENST00000529073 C4orf19Q8IY42 314 aa12.76□□□□□ -0.37
CCDC90B-211ENST00000529073 BSNDQ8WZ55 320 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms