RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 PCBP2Q15366 365 aaKnown RBP eCLIP4.25□□□□□ -1.73
BRCA2-203ENST00000528762 ABCB5Q2M3G0 1257 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 GFOD2Q3B7J2 385 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 HABP4Q5JVS0 413 aaKnown RBP4.25□□□□□ -1.73
BRCA2-203ENST00000528762 MROH9Q5TGP6 573 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 PNMA8AQ86V59 439 aaPredicted RBP4.25□□□□□ -1.73
BRCA2-203ENST00000528762 NLRP10Q86W26 655 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 PTRH1Q86Y79 214 aaKnown RBP4.25□□□□□ -1.73
BRCA2-203ENST00000528762 SMC5Q8IY18 1101 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 MAGEB6Q8N7X4 407 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 KIAA1958Q8N8K9 716 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 PEX11GQ96HA9 241 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 GPR20Q99678 358 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 SLC6A20Q9NP91 592 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 ACSS2Q9NR19 701 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 TOMM22Q9NS69 142 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 MKS1Q9NXB0 559 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 KCNG1Q9UIX4 513 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 NUDT5Q9UKK9 219 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 DSEQ9UL01 958 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 NUB1Q9Y5A7 615 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 MRFAP1Q9Y605 127 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 SCDO00767 359 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 DVL2O14641 736 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 KCNK3O14649 394 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 MAFKO60675 156 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 CLASP2O75122 1294 aaKnown RBP4.24□□□□□ -1.73
BRCA2-203ENST00000528762 MT-CO1P00395 513 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 RBP3P10745 1247 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 IARSP41252 1262 aaKnown RBP4.24□□□□□ -1.73
BRCA2-203ENST00000528762 STAT5AP42229 794 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 RECQLP46063 649 aaPredicted RBP4.24□□□□□ -1.73
BRCA2-203ENST00000528762 KIF11P52732 1056 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 PHC1P78364 1004 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 KRT85P78386 507 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 SMAD3P84022 425 aaKnown RBP4.24□□□□□ -1.73
BRCA2-203ENST00000528762 CAP1Q01518 475 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 SMAD2Q15796 467 aaKnown RBP4.24□□□□□ -1.73
BRCA2-203ENST00000528762 ZNF827Q17R98 1081 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 ZXDCQ2QGD7 858 aaPredicted RBP4.24□□□□□ -1.73
BRCA2-203ENST00000528762 TMEM240Q5SV17 173 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 GPR158Q5T848 1215 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 CD300LDQ6UXZ3 194 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 FRMD7Q6ZUT3 714 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 ZNF761Q86XN6 746 aaPredicted RBP4.24□□□□□ -1.73
BRCA2-203ENST00000528762 RIOX2Q8IUF8 465 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 ZZZ3Q8IYH5 903 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 Q8N1Y9 231 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 CPA6Q8N4T0 437 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 ZNF610Q8N9Z0 462 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 NETO2Q8NC67 525 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 C1orf162Q8NEQ5 155 aaPredicted RBP4.24□□□□□ -1.73
BRCA2-203ENST00000528762 PIP4K2CQ8TBX8 421 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 MORC4Q8TE76 937 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.24□□□□□ -1.73
BRCA2-203ENST00000528762 ZDHHC5Q9C0B5 715 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 ZNF700Q9H0M5 742 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 TMPRSS5Q9H3S3 457 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 PCIF1Q9H4Z3 704 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 NTMQ9P121 344 aa4.24□□□□□ -1.73
BRCA2-203ENST00000528762 KLHL33A6NCF5 533 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 MAN2B1O00754 1011 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 HGSO14964 777 aaPredicted RBP4.23□□□□□ -1.73
BRCA2-203ENST00000528762 SGSM2O43147 1006 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 CYP2C8P10632 490 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 VCAM1P19320 739 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 LRRC32Q14392 662 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 TMEM132BQ14DG7 1078 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 CHRNA2Q15822 529 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 ZFYVE27Q5T4F4 411 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 MCTP2Q6DN12 878 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 CXorf57Q6NSI4 855 aaKnown RBP4.23□□□□□ -1.73
BRCA2-203ENST00000528762 CC2D1AQ6P1N0 951 aaPredicted RBP4.23□□□□□ -1.73
BRCA2-203ENST00000528762 CMIPQ8IY22 773 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 AMOTL1Q8IY63 956 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 ADAMTS17Q8TE56 1095 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 SH3RF2Q8TEC5 729 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 LMBR1Q8WVP7 490 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 DLG3Q92796 817 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 ZSWIM3Q96MP5 696 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 RPS6KC1Q96S38 1066 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 SMOC1Q9H4F8 434 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 MYH16Q9H6N6 1097 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 TOPORSQ9NS56 1045 aaPredicted RBP4.23□□□□□ -1.73
BRCA2-203ENST00000528762 PNMA8BQ9ULN7 279 aaPredicted RBP4.23□□□□□ -1.73
BRCA2-203ENST00000528762 SRPK3Q9UPE1 567 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 GIT1Q9Y2X7 761 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 ATP23Q9Y6H3 246 aa4.23□□□□□ -1.73
BRCA2-203ENST00000528762 SLC27A2O14975 620 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 PLIN1O60240 522 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 PCDHGA12O60330 932 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 TADA3O75528 432 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 EIF3JO75822 258 aaKnown RBP4.22□□□□□ -1.73
BRCA2-203ENST00000528762 MYL1P05976 194 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 CD40P25942 277 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 CYP2C19P33261 490 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 GPR3P46089 330 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 ADCY1Q08828 1119 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 TCIRG1Q13488 830 aa4.22□□□□□ -1.73
BRCA2-203ENST00000528762 BIRC2Q13490 618 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms