RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	RPS6KL1	Q9Y6S9	549 aa		4.39	□□□□□ -1.71
CLNS1A-209	ENST00000527299	KANK1	Q14678	1352 aa		4.39	□□□□□ -1.71
CLNS1A-209	ENST00000527299	AKNA	Q7Z591	1439 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	CEP164	Q9UPV0	1460 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	ANKRD18B	A2A2Z9	1011 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	GOLGA6L6	A8MZA4	724 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	GOLGA6L22	H0YM25	854 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	REC8	O95072	547 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	LTF	P02788	710 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	CAPNS1	P04632	268 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	TPM3	P06753	285 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	KRT4	P19013	534 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	DNAJA1	P31689	397 aa	Known RBP	4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	RPS19	P39019	145 aa	Known RBP	4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	KCNJ6	P48051	423 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	NASP	P49321	788 aa	Predicted RBP	4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	COL10A1	Q03692	680 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	BIRC2	Q13490	618 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	NFYC	Q13952	458 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	NOLC1	Q14978	699 aa	Known RBP eCLIP	4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	ZMAT1	Q5H9K5	638 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	SLC35F1	Q5T1Q4	408 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299		Q6ZPA2	131 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	DDX46	Q7L014	1031 aa	Known RBP	4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	OTOP3	Q7RTS5	596 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	RBM12B	Q8IXT5	1001 aa	Known RBP	4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	ULK2	Q8IYT8	1036 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	PDLIM2	Q96JY6	352 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	NOL10	Q9BSC4	688 aa	Known RBP	4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	TACO1	Q9BSH4	297 aa	Known RBP	4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	MSL2	Q9HCI7	577 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	CEP72	Q9P209	647 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	TELO2	Q9Y4R8	837 aa		4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	DDX49	Q9Y6V7	483 aa	Known RBP	4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	RSF1	Q96T23	1441 aa	Predicted RBP	4.38	□□□□□ -1.71
CLNS1A-209	ENST00000527299	GOLGA6C	A6NDK9	693 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	GOLGA6B	A6NDN3	693 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299		H0YHG0	523 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	GOLGA6D	P0CG33	693 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	ATP2B1	P20020	1258 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	PAX7	P23759	505 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	HIBADH	P31937	336 aa	Known RBP	4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	SARNP	P82979	210 aa	Known RBP	4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	FOXL1	Q12952	345 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	CHAF1A	Q13111	956 aa	Predicted RBP	4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	CDC37	Q16543	378 aa	Predicted RBP	4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	SV2C	Q496J9	727 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	MAP9	Q49MG5	647 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	SUGP1	Q8IWZ8	645 aa	Known RBP	4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	UHMK1	Q8TAS1	419 aa	Known RBP	4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	CPLX3	Q8WVH0	158 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	CFHR4	Q92496	578 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	SCYL1	Q96KG9	808 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	PANK3	Q9H999	370 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	TLR9	Q9NR96	1032 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	GOLGA6A	Q9NYA3	693 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	LRP2BP	Q9P2M1	347 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	NR2E1	Q9Y466	385 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	KTN1	Q86UP2	1357 aa	Known RBP	4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	NCOA2	Q15596	1464 aa		4.37	□□□□□ -1.71
CLNS1A-209	ENST00000527299	MAPKBP1	O60336	1514 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299		A0A1B0GUL7	405 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	RAMP2	O60895	175 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	EIF3J	O75822	258 aa	Known RBP	4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	ZNF16	P17020	682 aa	Predicted RBP	4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	ETV4	P43268	484 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	GJA8	P48165	433 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	EPHA5	P54756	1037 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	IRX1	P78414	480 aa	Predicted RBP	4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	ZSCAN26	Q16670	478 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	DNAJC21	Q5F1R6	531 aa	Known RBP	4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	JAKMIP3	Q5VZ66	844 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	FAM184A	Q8NB25	1140 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	MICAL1	Q8TDZ2	1067 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	SNRNP27	Q8WVK2	155 aa	Known RBP	4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	TNPO1	Q92973	898 aa	Known RBP	4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	CLIP3	Q96DZ5	547 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	NAF1	Q96HR8	494 aa	Known RBP	4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	GPR27	Q9NS67	375 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	PLA2G3	Q9NZ20	509 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	JRKL	Q9Y4A0	524 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	RIPOR2	Q9Y4F9	1068 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	NPC1L1	Q9UHC9	1359 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	ARHGAP31	Q2M1Z3	1444 aa		4.36	□□□□□ -1.71
CLNS1A-209	ENST00000527299	ESYT3	A0FGR9	886 aa		4.35	□□□□□ -1.71
CLNS1A-209	ENST00000527299	ACOT7	O00154	380 aa		4.35	□□□□□ -1.71
CLNS1A-209	ENST00000527299	ARHGAP6	O43182	974 aa		4.35	□□□□□ -1.71
CLNS1A-209	ENST00000527299	CTIF	O43310	598 aa	Known RBP	4.35	□□□□□ -1.71
CLNS1A-209	ENST00000527299	MSC	O60682	206 aa		4.35	□□□□□ -1.71
CLNS1A-209	ENST00000527299	CT47B1	P0C2W7	299 aa	Predicted RBP	4.35	□□□□□ -1.71
CLNS1A-209	ENST00000527299	FBL	P22087	321 aa	Known RBP	4.35	□□□□□ -1.71
CLNS1A-209	ENST00000527299	LMO1	P25800	156 aa		4.35	□□□□□ -1.71
CLNS1A-209	ENST00000527299	CYP2C19	P33261	490 aa		4.35	□□□□□ -1.71
CLNS1A-209	ENST00000527299	IL12RB1	P42701	662 aa		4.35	□□□□□ -1.71
CLNS1A-209	ENST00000527299	MAGEA8	P43361	318 aa		4.35	□□□□□ -1.71
CLNS1A-209	ENST00000527299	ATXN1	P54253	815 aa	Known RBP	4.35	□□□□□ -1.71
CLNS1A-209	ENST00000527299	RRAD	P55042	308 aa		4.35	□□□□□ -1.71
CLNS1A-209	ENST00000527299	TBR1	Q16650	682 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms