RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 MIER3Q7Z3K6 550 aa9.98□□□□□ -0.81
CCDC90B-208ENST00000527025 FAM184AQ8NB25 1140 aa9.98□□□□□ -0.81
CCDC90B-208ENST00000527025 TMEM40Q8WWA1 233 aa9.98□□□□□ -0.81
CCDC90B-208ENST00000527025 NIFKQ9BYG3 293 aaKnown RBP9.98□□□□□ -0.81
CCDC90B-208ENST00000527025 FOXP1Q9H334 677 aaPredicted RBP9.98□□□□□ -0.81
CCDC90B-208ENST00000527025 SMIM35A0A1B0GVV1 85 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 CAND2O75155 1236 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 GPR32O75388 356 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 SLITRK3O94933 977 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 MCM7P33993 719 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 TXKP42681 527 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 NPEPPSP55786 919 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 LSM11P83369 360 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 CTTNQ14247 550 aaKnown RBP9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 IL17AQ16552 155 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 PLA2G4FQ68DD2 849 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 NOSTRINQ8IVI9 506 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 HERC6Q8IVU3 1022 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 HSCBQ8IWL3 235 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 CKAP2LQ8IYA6 745 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 LRRC71Q8N4P6 559 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 RDM1Q8NG50 284 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 LINC01599Q8WXQ3 324 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 INTS4Q96HW7 963 aaKnown RBP9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 ZNF668Q96K58 619 aaPredicted RBP9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 PPP1R16BQ96T49 567 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 HSD17B14Q9BPX1 270 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 CELF4Q9BZC1 486 aaKnown RBP9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 NKX2-4Q9H2Z4 354 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 BRMS1Q9HCU9 246 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 COL1A2P08123 1366 aa9.97□□□□□ -0.81
CCDC90B-208ENST00000527025 COL4A6Q14031 1691 aa9.96□□□□□ -0.81
CCDC90B-208ENST00000527025 ARID2Q68CP9 1835 aa9.96□□□□□ -0.81
CCDC90B-208ENST00000527025 IGKV6-21A0A0C4DH24 114 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 ABHD14A-ACY1A0A1B0GW23 586 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 DDX11L8A8MPP1 907 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 STK25O00506 426 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 BAIAP3O94812 1187 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 PARNO95453 639 aaKnown RBP9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 VTNP04004 478 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 NUDT7P0C024 238 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 SPATA31C1P0DKV0 1188 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 CD52P31358 61 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 CLCN3P51790 818 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 PSMC5P62195 406 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 IKBKEQ14164 716 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 EPHA7Q15375 998 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 CALCRLQ16602 461 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 TMEM266Q2M3C6 531 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 NCAPH2Q6IBW4 605 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 EFCAB12Q6NXP0 572 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 CRIPAKQ8N1N5 446 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 TIFAQ96CG3 184 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 DYDC2Q96IM9 177 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 CDX2Q99626 313 aaPredicted RBP9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 ADAMTS10Q9H324 1103 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 TMX1Q9H3N1 280 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 ZNF576Q9H609 170 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 TTC12Q9H892 705 aaPredicted RBP9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 PCDHA12Q9UN75 941 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 NOC2LQ9Y3T9 749 aaKnown RBP9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 PCDHB6Q9Y5E3 794 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 UNC80Q8N2C7 3258 aa9.96□□□□□ -0.82
CCDC90B-208ENST00000527025 EPOPA6NHQ4 379 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 RFXAPO00287 272 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 ENPP3O14638 875 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 NEMFO60524 1076 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 CA3P07451 260 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 ACTN1P12814 892 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 QARSP47897 775 aaKnown RBP9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 CYP4A11Q02928 519 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 ADGRE1Q14246 886 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 SAFBQ15424 915 aaKnown RBP eCLIP9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 ECM1Q16610 540 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 KIZQ2M2Z5 673 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 MTERF2Q49AM1 385 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 XKR3Q5GH77 459 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 TTC38Q5R3I4 469 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 ZNF697Q5TEC3 545 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 FAM117BQ6P1L5 589 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 KSR1Q8IVT5 923 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 SLFN12Q8IYM2 578 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 NME8Q8N427 588 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 METTL13Q8N6R0 699 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 PHOSPHO2Q8TCD6 241 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 MYLIPQ8WY64 445 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 NAP1L4Q99733 375 aaKnown RBP9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 EIF2AK1Q9BQI3 630 aaKnown RBP9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 LXNQ9BS40 222 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 IFIH1Q9BYX4 1025 aaKnown RBP9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 SUGCTQ9HAC7 445 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 NRBP2Q9NSY0 501 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 SEPT9Q9UHD8 586 aaPredicted RBP9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 PADI3Q9ULW8 664 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 SMC3Q9UQE7 1217 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 PCDHA11Q9Y5I1 949 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 TRPV2Q9Y5S1 764 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 KDM3AQ9Y4C1 1321 aa9.95□□□□□ -0.82
CCDC90B-208ENST00000527025 MYO9BQ13459 2157 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms