RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 MTMR14Q8NCE2 650 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 INPP4AQ96PE3 977 aaPredicted RBP19.22■□□□□ 0.67
USH1C-205ENST00000527020 CAMKK2Q96RR4 588 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 LXNQ9BS40 222 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 DMAC2Q9NW81 257 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 COL20A1Q9P218 1284 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 RNF14Q9UBS8 474 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 SEL1LQ9UBV2 794 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 UBE4BO95155 1302 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 CCDC66A2RUB6 948 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 AGPSO00116 658 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 IPO5O00410 1097 aaKnown RBP19.22■□□□□ 0.67
USH1C-205ENST00000527020 PSMC2P35998 433 aaKnown RBP19.22■□□□□ 0.67
USH1C-205ENST00000527020 MAP3K10Q02779 954 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 EN1Q05925 392 aaPredicted RBP19.22■□□□□ 0.67
USH1C-205ENST00000527020 MAPK7Q13164 816 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 BANK1Q8NDB2 785 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 ZBED3Q96IU2 234 aaPredicted RBP19.22■□□□□ 0.67
USH1C-205ENST00000527020 MXRA8Q9BRK3 442 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 STRA6Q9BX79 667 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 TEKT3Q9BXF9 490 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 STK32BQ9NY57 414 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 STIM2Q9P246 746 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 ODF2LQ9ULJ1 636 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 RPTORQ8N122 1335 aa19.21■□□□□ 0.67
USH1C-205ENST00000527020 LMAN1P49257 510 aa19.21■□□□□ 0.67
USH1C-205ENST00000527020 FAM178BQ8IXR5 827 aa19.21■□□□□ 0.67
USH1C-205ENST00000527020 DAW1Q8N136 415 aa19.21■□□□□ 0.67
USH1C-205ENST00000527020 MKNK1Q9BUB5 465 aa19.21■□□□□ 0.67
USH1C-205ENST00000527020 KCND2Q9NZV8 630 aa19.21■□□□□ 0.67
USH1C-205ENST00000527020 PPP1R37O75864 691 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 DNA2P51530 1060 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 ALKBH5Q6P6C2 394 aaKnown RBP19.2■□□□□ 0.66
USH1C-205ENST00000527020 IL31RAQ8NI17 732 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 RIN2Q8WYP3 895 aaPredicted RBP19.2■□□□□ 0.66
USH1C-205ENST00000527020 AGPAT3Q9NRZ7 376 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 RNF40O75150 1001 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 ICAM1P05362 532 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 GUCY2CP25092 1073 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 RXRBP28702 533 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 TNFRSF8P28908 595 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 GGCXP38435 758 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 HNRNPH2P55795 449 aaKnown RBP19.2■□□□□ 0.66
USH1C-205ENST00000527020 ODR4Q5SWX8 454 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 LRRC57Q8N9N7 239 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 CLEC4DQ8WXI8 215 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 RIT2Q99578 217 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 ATP8B3O60423 1300 aa19.2■□□□□ 0.66
USH1C-205ENST00000527020 DDX3XO00571 662 aaKnown RBP eCLIP19.19■□□□□ 0.66
USH1C-205ENST00000527020 NFIBO00712 420 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 HIP1RO75146 1068 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 ANXA13P27216 316 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 FMO5P49326 533 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 NBPF9Q3BBW0 867 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 C8orf74Q6P047 294 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.19■□□□□ 0.66
USH1C-205ENST00000527020 CCPG1Q9ULG6 757 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 PHF20L1A8MW92 1017 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 DDX39AO00148 427 aaKnown RBP19.19■□□□□ 0.66
USH1C-205ENST00000527020 DHX15O43143 795 aaKnown RBP19.19■□□□□ 0.66
USH1C-205ENST00000527020 ASNSP08243 561 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 CBWD6Q4V339 395 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 GLE1Q53GS7 698 aaKnown RBP19.19■□□□□ 0.66
USH1C-205ENST00000527020 CBWD3Q5JTY5 395 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 CBWD5Q5RIA9 395 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 SND1Q7KZF4 910 aaKnown RBP eCLIP19.19■□□□□ 0.66
USH1C-205ENST00000527020 AGBL3Q8NEM8 1001 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 GOLPH3Q9H4A6 298 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 FAM204AQ9H8W3 233 aa19.19■□□□□ 0.66
USH1C-205ENST00000527020 SCAF8Q9UPN6 1271 aaKnown RBP19.19■□□□□ 0.66
USH1C-205ENST00000527020 ZBTB48P10074 688 aaPredicted RBP19.18■□□□□ 0.66
USH1C-205ENST00000527020 BCRP11274 1271 aa19.18■□□□□ 0.66
USH1C-205ENST00000527020 DPEP1P16444 411 aa19.18■□□□□ 0.66
USH1C-205ENST00000527020 CYP2J2P51589 502 aa19.18■□□□□ 0.66
USH1C-205ENST00000527020 ZNF341Q9BYN7 854 aa19.18■□□□□ 0.66
USH1C-205ENST00000527020 KCNH7Q9NS40 1196 aa19.18■□□□□ 0.66
USH1C-205ENST00000527020 ZNRF3Q9ULT6 936 aa19.18■□□□□ 0.66
USH1C-205ENST00000527020 WNT10BO00744 389 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 FLOT1O75955 427 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 GFPT2O94808 682 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 GLI1P08151 1106 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 HS2ST1Q7LGA3 356 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 LNX1Q8TBB1 728 aaPredicted RBP19.17■□□□□ 0.66
USH1C-205ENST00000527020 GPR88Q9GZN0 384 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 PKD2L1Q9P0L9 805 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 A0A0U1RQG5 324 aaPredicted RBP19.17■□□□□ 0.66
USH1C-205ENST00000527020 ARHGEF35A5YM69 484 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 F8VZ95 297 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 TRIM49P0CI25 452 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 TRIM49CP0CI26 452 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 FERP16591 822 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 ITGB3BPQ13352 177 aaPredicted RBP19.17■□□□□ 0.66
USH1C-205ENST00000527020 SLC30A5Q8TAD4 765 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 NEK9Q8TD19 979 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 GDF3Q9NR23 364 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 TMEM59LQ9UK28 342 aa19.17■□□□□ 0.66
USH1C-205ENST00000527020 CES2O00748 559 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 PPP1R12BO60237 982 aaPredicted RBP19.16■□□□□ 0.66
USH1C-205ENST00000527020 EVI5O60447 810 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 KIF4AO95239 1232 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms