RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 TREHO43280 583 aa18.38■□□□□ 0.53
CAPN1-205ENST00000526954 GAS2O43903 313 aaKnown RBP18.38■□□□□ 0.53
CAPN1-205ENST00000526954 CD4P01730 458 aa18.38■□□□□ 0.53
CAPN1-205ENST00000526954 CYP11B2P19099 503 aa18.38■□□□□ 0.53
CAPN1-205ENST00000526954 POLGP54098 1239 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-205ENST00000526954 ATN1P54259 1190 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-205ENST00000526954 ZNF200P98182 395 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-205ENST00000526954 LONRF3Q496Y0 759 aa18.38■□□□□ 0.53
CAPN1-205ENST00000526954 RINT1Q6NUQ1 792 aa18.38■□□□□ 0.53
CAPN1-205ENST00000526954 C1orf186Q6ZWK4 172 aa18.38■□□□□ 0.53
CAPN1-205ENST00000526954 LINC01465Q8N7H1 131 aa18.38■□□□□ 0.53
CAPN1-205ENST00000526954 SLC7A3Q8WY07 619 aa18.38■□□□□ 0.53
CAPN1-205ENST00000526954 TIGD1Q96MW7 591 aa18.38■□□□□ 0.53
CAPN1-205ENST00000526954 TNMDQ9H2S6 317 aa18.38■□□□□ 0.53
CAPN1-205ENST00000526954 SERTAD1Q9UHV2 236 aa18.38■□□□□ 0.53
CAPN1-205ENST00000526954 B4GALT4O60513 344 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 NR1I2O75469 434 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 SSBP05455 408 aaKnown RBP eCLIP18.37■□□□□ 0.53
CAPN1-205ENST00000526954 EMC2Q15006 297 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 PTGISQ16647 500 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 LRRC26Q2I0M4 334 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 TAF2Q6P1X5 1199 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 KRBA2Q6ZNG9 492 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 SERINC5Q86VE9 423 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 CEP57L1Q8IYX8 460 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 RETREG2Q8NC44 543 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 MCPH1Q8NEM0 835 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 RUSC1Q9BVN2 902 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 TIPINQ9BVW5 301 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 LRRC27Q9C0I9 530 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 ATP6V0A4Q9HBG4 840 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 XPNPEP1Q9NQW7 623 aa18.37■□□□□ 0.53
CAPN1-205ENST00000526954 SMIM35A0A1B0GVV1 85 aa18.36■□□□□ 0.53
CAPN1-205ENST00000526954 USO1O60763 962 aaKnown RBP18.36■□□□□ 0.53
CAPN1-205ENST00000526954 RPLP2P05387 115 aaKnown RBP18.36■□□□□ 0.53
CAPN1-205ENST00000526954 GUCY2CP25092 1073 aa18.36■□□□□ 0.53
CAPN1-205ENST00000526954 MYH11P35749 1972 aa18.36■□□□□ 0.53
CAPN1-205ENST00000526954 RTP1P59025 263 aa18.36■□□□□ 0.53
CAPN1-205ENST00000526954 AMPD3Q01432 767 aa18.36■□□□□ 0.53
CAPN1-205ENST00000526954 PTK7Q13308 1070 aa18.36■□□□□ 0.53
CAPN1-205ENST00000526954 TRIM60Q495X7 471 aa18.36■□□□□ 0.53
CAPN1-205ENST00000526954 ARSHQ5FYA8 562 aa18.36■□□□□ 0.53
CAPN1-205ENST00000526954 EFCAB12Q6NXP0 572 aa18.36■□□□□ 0.53
CAPN1-205ENST00000526954 RPAINQ86UA6 219 aa18.36■□□□□ 0.53
CAPN1-205ENST00000526954 GPBP1Q86WP2 473 aa18.36■□□□□ 0.53
CAPN1-205ENST00000526954 ALPK3Q96L96 1907 aa18.36■□□□□ 0.53
CAPN1-205ENST00000526954 MTRQ99707 1265 aa18.36■□□□□ 0.53
CAPN1-205ENST00000526954 TRPV6Q9H1D0 765 aa18.36■□□□□ 0.53
CAPN1-205ENST00000526954 TRMT13Q9NUP7 481 aaKnown RBP18.36■□□□□ 0.53
CAPN1-205ENST00000526954 DCDC2CA8MYV0 355 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 TLR3O15455 904 aaKnown RBP18.35■□□□□ 0.53
CAPN1-205ENST00000526954 CYP2C9P11712 490 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 PTMSP20962 102 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 TMOD1P28289 359 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 TLE2Q04725 743 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 MKRN4PQ13434 485 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-205ENST00000526954 DHX8Q14562 1220 aaKnown RBP18.35■□□□□ 0.53
CAPN1-205ENST00000526954 IER5Q5VY09 327 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 KANK3Q6NY19 840 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 CNNM4Q6P4Q7 775 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 RUFY4Q6ZNE9 571 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 SH3RF1Q7Z6J0 888 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 ELOA2Q8IYF1 753 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-205ENST00000526954 KIAA0319LQ8IZA0 1049 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 NME8Q8N427 588 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 CNNM3Q8NE01 707 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 TCP11Q8WWU5 503 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 ZBTB10Q96DT7 871 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 PAGE5Q96GU1 130 aa18.35■□□□□ 0.53
CAPN1-205ENST00000526954 MYMKA6NI61 221 aa18.34■□□□□ 0.53
CAPN1-205ENST00000526954 PQBP1O60828 265 aaKnown RBP18.34■□□□□ 0.53
CAPN1-205ENST00000526954 MYL1P05976 194 aa18.34■□□□□ 0.53
CAPN1-205ENST00000526954 ARL2P36404 184 aa18.34■□□□□ 0.53
CAPN1-205ENST00000526954 DNM2P50570 870 aa18.34■□□□□ 0.53
CAPN1-205ENST00000526954 LRRC71Q8N4P6 559 aa18.34■□□□□ 0.53
CAPN1-205ENST00000526954 METTL13Q8N6R0 699 aa18.34■□□□□ 0.53
CAPN1-205ENST00000526954 CCDC34Q96HJ3 373 aa18.34■□□□□ 0.53
CAPN1-205ENST00000526954 C7orf25Q9BPX7 421 aa18.34■□□□□ 0.53
CAPN1-205ENST00000526954 SUGCTQ9HAC7 445 aa18.34■□□□□ 0.53
CAPN1-205ENST00000526954 BMP2KQ9NSY1 1161 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-205ENST00000526954 DACT1Q9NYF0 836 aa18.34■□□□□ 0.53
CAPN1-205ENST00000526954 NOD1Q9Y239 953 aa18.34■□□□□ 0.53
CAPN1-205ENST00000526954 KINO60870 393 aaKnown RBP18.33■□□□□ 0.52
CAPN1-205ENST00000526954 MBD3O95983 291 aa18.33■□□□□ 0.52
CAPN1-205ENST00000526954 CLCN3P51790 818 aa18.33■□□□□ 0.52
CAPN1-205ENST00000526954 FAAP100Q0VG06 881 aa18.33■□□□□ 0.52
CAPN1-205ENST00000526954 DRP2Q13474 957 aa18.33■□□□□ 0.52
CAPN1-205ENST00000526954 GIT2Q14161 759 aa18.33■□□□□ 0.52
CAPN1-205ENST00000526954 TRIM71Q2Q1W2 868 aaKnown RBP18.33■□□□□ 0.52
CAPN1-205ENST00000526954 ZNF710Q8N1W2 664 aa18.33■□□□□ 0.52
CAPN1-205ENST00000526954 GPT2Q8TD30 523 aa18.33■□□□□ 0.52
CAPN1-205ENST00000526954 DHX38Q92620 1227 aaKnown RBP18.33■□□□□ 0.52
CAPN1-205ENST00000526954 DDX12PQ92771 950 aa18.33■□□□□ 0.52
CAPN1-205ENST00000526954 STAMQ92783 540 aa18.33■□□□□ 0.52
CAPN1-205ENST00000526954 KIFAP3Q92845 792 aa18.33■□□□□ 0.52
CAPN1-205ENST00000526954 TMEM143Q96AN5 459 aa18.33■□□□□ 0.52
CAPN1-205ENST00000526954 DNAJC19Q96DA6 116 aa18.33■□□□□ 0.52
CAPN1-205ENST00000526954 DRC1Q96MC2 740 aa18.33■□□□□ 0.52
CAPN1-205ENST00000526954 TRIM9Q9C026 710 aa18.33■□□□□ 0.52
CAPN1-205ENST00000526954 ODF2LQ9ULJ1 636 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms