RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 FGFR1P11362 822 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 CLK2P49760 499 aaKnown RBP13.3□□□□□ -0.28
CAPN1-204ENST00000526468 MRE11P49959 708 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 METAP2P50579 478 aaKnown RBP eCLIP13.3□□□□□ -0.28
CAPN1-204ENST00000526468 UBE3AQ05086 875 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 ZNF484Q5JVG2 852 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 PLPP4Q5VZY2 271 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 ABHD15Q6UXT9 468 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 FAM228AQ86W67 206 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 REXO1Q8N1G1 1221 aaKnown RBP13.3□□□□□ -0.28
CAPN1-204ENST00000526468 METTL13Q8N6R0 699 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 COLGALT1Q8NBJ5 622 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 MFSD14AQ96MC6 490 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 ZNF577Q9BSK1 485 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 TLE6Q9H808 572 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 ST3GAL5Q9UNP4 418 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 MTCL1Q9Y4B5 1905 aaKnown RBP13.3□□□□□ -0.28
CAPN1-204ENST00000526468 FAM186AA6NE01 2351 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 IGLV3-22A0A075B6J6 115 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 FSD2A1L4K1 749 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 ZBTB42B2RXF5 422 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 GPR182O15218 404 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 FGF18O76093 207 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 LAG3P18627 525 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 CDC27P30260 824 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 CLCN3P51790 818 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 RBM10P98175 930 aaKnown RBP13.29□□□□□ -0.28
CAPN1-204ENST00000526468 PFKFB3Q16875 520 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-204ENST00000526468 BMP2KLQ5H9B9 411 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 FAM102BQ5T8I3 360 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 SWSAP1Q6NVH7 229 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 SLC24A5Q71RS6 500 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 DHX32Q7L7V1 743 aaKnown RBP13.29□□□□□ -0.28
CAPN1-204ENST00000526468 KIAA0319LQ8IZA0 1049 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 LRRC43Q8N309 656 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 BBXQ8WY36 941 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-204ENST00000526468 SCLT1Q96NL6 688 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 MAP7D2Q96T17 732 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 KCNH6Q9H252 994 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 CDHR5Q9HBB8 845 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 ATP6V0A4Q9HBG4 840 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 ENTPD7Q9NQZ7 604 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 RGS18Q9NS28 235 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 AKT3Q9Y243 479 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 SAMM50Q9Y512 469 aa13.29□□□□□ -0.28
CAPN1-204ENST00000526468 DOCK8Q8NF50 2099 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 TMEM221A6NGB7 291 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 C9IYK1 514 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 M0R296 226 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 PER2O15055 1255 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 RCAN1P53805 252 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 APOBRQ0VD83 1088 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 KRT32Q14532 448 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 DUSP6Q16828 381 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 ADCK5Q3MIX3 580 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 PRR16Q569H4 304 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 ZNF746Q6NUN9 644 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-204ENST00000526468 SKAP1Q86WV1 359 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 SUGP1Q8IWZ8 645 aaKnown RBP13.28□□□□□ -0.28
CAPN1-204ENST00000526468 SMAP1Q8IYB5 467 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-204ENST00000526468 ABI1Q8IZP0 508 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 VN1R2Q8NFZ6 395 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 CCDC12Q8WUD4 166 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-204ENST00000526468 EDAQ92838 391 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 RPGRIP1Q96KN7 1286 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 FAM167AQ96KS9 214 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 TMEM161AQ9NX61 479 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 CEP131Q9UPN4 1083 aa13.28□□□□□ -0.28
CAPN1-204ENST00000526468 SPTBN4Q9H254 2564 aa13.27□□□□□ -0.28
CAPN1-204ENST00000526468 RIF1Q5UIP0 2472 aaKnown RBP13.27□□□□□ -0.29
CAPN1-204ENST00000526468 ESYT2A0FGR8 921 aa13.27□□□□□ -0.29
CAPN1-204ENST00000526468 LOC730098B7Z3J9 87 aa13.27□□□□□ -0.29
CAPN1-204ENST00000526468 DHX15O43143 795 aaKnown RBP13.27□□□□□ -0.29
CAPN1-204ENST00000526468 PSAPP07602 524 aa13.27□□□□□ -0.29
CAPN1-204ENST00000526468 ATP4AP20648 1035 aa13.27□□□□□ -0.29
CAPN1-204ENST00000526468 SP100P23497 879 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-204ENST00000526468 CRYBB1P53674 252 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-204ENST00000526468 EXOSC10Q01780 885 aaKnown RBP13.27□□□□□ -0.29
CAPN1-204ENST00000526468 LLGL2Q6P1M3 1020 aa13.27□□□□□ -0.29
CAPN1-204ENST00000526468 RASEFQ8IZ41 740 aa13.27□□□□□ -0.29
CAPN1-204ENST00000526468 RNF169Q8NCN4 708 aa13.27□□□□□ -0.29
CAPN1-204ENST00000526468 RASGRP4Q8TDF6 673 aa13.27□□□□□ -0.29
CAPN1-204ENST00000526468 CDCA3Q99618 268 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-204ENST00000526468 TCF25Q9BQ70 676 aa13.27□□□□□ -0.29
CAPN1-204ENST00000526468 PHF7Q9BWX1 381 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-204ENST00000526468 C6orf50Q9HD87 102 aa13.27□□□□□ -0.29
CAPN1-204ENST00000526468 TBC1D22BQ9NU19 505 aa13.27□□□□□ -0.29
CAPN1-204ENST00000526468 TYW1Q9NV66 732 aaKnown RBP13.27□□□□□ -0.29
CAPN1-204ENST00000526468 GABBR1Q9UBS5 961 aa13.27□□□□□ -0.29
CAPN1-204ENST00000526468 NID2Q14112 1375 aa13.27□□□□□ -0.29
CAPN1-204ENST00000526468 CCDC196A0A1B0GTZ2 297 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 WDR64B1ANS9 1081 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 FSCN2O14926 492 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 HOXA2O43364 376 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 CHMP2AO43633 222 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 CDC45O75419 566 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 CYP3A4P08684 503 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 CPA1P15085 419 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 CA8P35219 290 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 PPM1AP35813 382 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms