RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 TMOD4Q9NZQ9 345 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 DUSP10Q9Y6W6 482 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 WDR64B1ANS9 1081 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 AKR1B10O60218 316 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 SLC9A1P19634 815 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 YWHABP31946 246 aaKnown RBP17.47■□□□□ 0.39
USH1C-204ENST00000526313 PSMC5P62195 406 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 APBA1Q02410 837 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 UGCGQ16739 394 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 EXOC3L4Q17RC7 722 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 ZNF746Q6NUN9 644 aaPredicted RBP17.47■□□□□ 0.39
USH1C-204ENST00000526313 HS2ST1Q7LGA3 356 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 NSUN6Q8TEA1 469 aaKnown RBP17.47■□□□□ 0.39
USH1C-204ENST00000526313 GOLGA1Q92805 767 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 ST6GALNAC4Q9H4F1 302 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 LARSQ9P2J5 1176 aaKnown RBP17.47■□□□□ 0.39
USH1C-204ENST00000526313 SPDYE16A6NNV3 312 aaPredicted RBP17.46■□□□□ 0.39
USH1C-204ENST00000526313 USO1O60763 962 aaKnown RBP17.46■□□□□ 0.39
USH1C-204ENST00000526313 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.46■□□□□ 0.39
USH1C-204ENST00000526313 KSR1Q8IVT5 923 aa17.46■□□□□ 0.39
USH1C-204ENST00000526313 RBM46Q8TBY0 533 aaKnown RBP17.46■□□□□ 0.39
USH1C-204ENST00000526313 CYP39A1Q9NYL5 469 aa17.46■□□□□ 0.39
USH1C-204ENST00000526313 SAMM50Q9Y512 469 aa17.46■□□□□ 0.39
USH1C-204ENST00000526313 WDR90Q96KV7 1748 aa17.46■□□□□ 0.39
USH1C-204ENST00000526313 LOC285556D6RIA3 1793 aa17.46■□□□□ 0.39
USH1C-204ENST00000526313 PAPPA2Q9BXP8 1791 aa17.46■□□□□ 0.39
USH1C-204ENST00000526313 ANO9A1A5B4 782 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 RGS20O76081 388 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 PLS3P13797 630 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 UCHL3P15374 230 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 CHMP4BP1P59074 171 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 GBP6Q6ZN66 633 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 NLRX1Q86UT6 975 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 FAM186BQ8IYM0 893 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 UPF1Q92900 1129 aaKnown RBP eCLIP17.45■□□□□ 0.38
USH1C-204ENST00000526313 MOV10L1Q9BXT6 1211 aaKnown RBP17.45■□□□□ 0.38
USH1C-204ENST00000526313 DEF6Q9H4E7 631 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 SIX2Q9NPC8 291 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 DDX41Q9UJV9 622 aaKnown RBP17.45■□□□□ 0.38
USH1C-204ENST00000526313 SNCAIPQ9Y6H5 919 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 STAM2O75886 525 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 KCNA2P16389 499 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 MAGEA1P43355 309 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 IRF2BP2Q7Z5L9 587 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 C12orf56Q8IXR9 622 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 SECISBP2LQ93073 1101 aaKnown RBP17.45■□□□□ 0.38
USH1C-204ENST00000526313 ACAD9Q9H845 621 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 A1CFQ9NQ94 594 aaKnown RBP17.45■□□□□ 0.38
USH1C-204ENST00000526313 FAM53CQ9NYF3 392 aa17.45■□□□□ 0.38
USH1C-204ENST00000526313 TESPA1A2RU30 521 aaPredicted RBP17.44■□□□□ 0.38
USH1C-204ENST00000526313 NFASCO94856 1347 aa17.44■□□□□ 0.38
USH1C-204ENST00000526313 ACTN1P12814 892 aa17.44■□□□□ 0.38
USH1C-204ENST00000526313 ZSCAN20P17040 1043 aaPredicted RBP17.44■□□□□ 0.38
USH1C-204ENST00000526313 CLCN6P51797 869 aa17.44■□□□□ 0.38
USH1C-204ENST00000526313 MCCD1P59942 119 aaPredicted RBP17.44■□□□□ 0.38
USH1C-204ENST00000526313 PPP2R5AQ15172 486 aa17.44■□□□□ 0.38
USH1C-204ENST00000526313 ZNF446Q9NWS9 450 aa17.44■□□□□ 0.38
USH1C-204ENST00000526313 ATP1A1P05023 1023 aaKnown RBP17.44■□□□□ 0.38
USH1C-204ENST00000526313 GTF2BQ00403 316 aa17.44■□□□□ 0.38
USH1C-204ENST00000526313 DCAF17Q5H9S7 520 aaPredicted RBP17.44■□□□□ 0.38
USH1C-204ENST00000526313 TXLNBQ8N3L3 684 aa17.44■□□□□ 0.38
USH1C-204ENST00000526313 TRIM58Q8NG06 486 aa17.44■□□□□ 0.38
USH1C-204ENST00000526313 TMEM206Q9H813 350 aa17.44■□□□□ 0.38
USH1C-204ENST00000526313 ADARB2Q9NS39 739 aaKnown RBP17.44■□□□□ 0.38
USH1C-204ENST00000526313 PCDHA10Q9Y5I2 948 aa17.44■□□□□ 0.38
USH1C-204ENST00000526313 WDR81Q562E7 1941 aa17.43■□□□□ 0.38
USH1C-204ENST00000526313 BACH1O14867 736 aa17.43■□□□□ 0.38
USH1C-204ENST00000526313 PPP1R12BO60237 982 aaPredicted RBP17.43■□□□□ 0.38
USH1C-204ENST00000526313 STBD1O95210 358 aa17.43■□□□□ 0.38
USH1C-204ENST00000526313 PRKCIP41743 596 aa17.43■□□□□ 0.38
USH1C-204ENST00000526313 JAM2P57087 298 aa17.43■□□□□ 0.38
USH1C-204ENST00000526313 SNRPFP62306 86 aaKnown RBP17.43■□□□□ 0.38
USH1C-204ENST00000526313 GFPT1Q06210 699 aaPredicted RBP17.43■□□□□ 0.38
USH1C-204ENST00000526313 VGLL4Q14135 290 aa17.43■□□□□ 0.38
USH1C-204ENST00000526313 SLC18A3Q16572 532 aa17.43■□□□□ 0.38
USH1C-204ENST00000526313 TEX35Q5T0J7 233 aa17.43■□□□□ 0.38
USH1C-204ENST00000526313 SMAP1Q8IYB5 467 aaPredicted RBP17.43■□□□□ 0.38
USH1C-204ENST00000526313 SAR1BQ9Y6B6 198 aa17.43■□□□□ 0.38
USH1C-204ENST00000526313 PTPRFP10586 1907 aa17.43■□□□□ 0.38
USH1C-204ENST00000526313 KIAA1217Q5T5P2 1943 aa17.43■□□□□ 0.38
USH1C-204ENST00000526313 DDNO94850 711 aaPredicted RBP17.42■□□□□ 0.38
USH1C-204ENST00000526313 NCKAP1LP55160 1127 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 RAPGEF1Q13905 1077 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 ASIC2Q16515 512 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 TDRD12Q587J7 1177 aaKnown RBP17.42■□□□□ 0.38
USH1C-204ENST00000526313 RNF10Q8N5U6 811 aaKnown RBP17.42■□□□□ 0.38
USH1C-204ENST00000526313 SLC17A8Q8NDX2 589 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 CDHR1Q96JP9 859 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 DRC1Q96MC2 740 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 PUF60Q9UHX1 559 aaKnown RBP17.42■□□□□ 0.38
USH1C-204ENST00000526313 FRMD4BQ9Y2L6 1034 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 FHOD1Q9Y613 1164 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 BZW2Q9Y6E2 419 aaKnown RBP17.42■□□□□ 0.38
USH1C-204ENST00000526313 LCTP09848 1927 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 MACROD2A1Z1Q3 448 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 SPATA31C2B4DYI2 1134 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 K7ENM7 598 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 ENC1O14682 589 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 TFRCP02786 760 aaKnown RBP17.42■□□□□ 0.38
USH1C-204ENST00000526313 FMO5P49326 533 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms