RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 KCNG4Q8TDN1 519 aa14.42□□□□□ -0.1
SMPD1-202ENST00000526280 VWCEQ96DN2 955 aa14.42□□□□□ -0.1
SMPD1-202ENST00000526280 CHAMP1Q96JM3 812 aa14.42□□□□□ -0.1
SMPD1-202ENST00000526280 PNMA5Q96PV4 448 aa14.42□□□□□ -0.1
SMPD1-202ENST00000526280 JPH2Q9BR39 696 aaPredicted RBP14.42□□□□□ -0.1
SMPD1-202ENST00000526280 CCSER1Q9C0I3 900 aa14.42□□□□□ -0.1
SMPD1-202ENST00000526280 DHX33Q9H6R0 707 aaKnown RBP14.42□□□□□ -0.1
SMPD1-202ENST00000526280 DDX19AQ9NUU7 478 aaKnown RBP14.42□□□□□ -0.1
SMPD1-202ENST00000526280 COLQQ9Y215 455 aaPredicted RBP14.42□□□□□ -0.1
SMPD1-202ENST00000526280 KDM3AQ9Y4C1 1321 aa14.42□□□□□ -0.1
SMPD1-202ENST00000526280 CTSHP09668 335 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 BMP8BP34820 402 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 CLCN3P51790 818 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 KRT85P78386 507 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 MRPS6P82932 125 aaKnown RBP14.41□□□□□ -0.1
SMPD1-202ENST00000526280 MGAT3Q09327 533 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 GRB10Q13322 594 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 PPIGQ13427 754 aaKnown RBP eCLIP14.41□□□□□ -0.1
SMPD1-202ENST00000526280 MBTPS1Q14703 1052 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 SPECC1Q5M775 1068 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 CHRDL2Q6WN34 429 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 USP49Q70CQ1 688 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 LRRC71Q8N4P6 559 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 SLC7A3Q8WY07 619 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 EPSTI1Q96J88 318 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 NT5C3AQ9H0P0 336 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 DNM3Q9UQ16 869 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 TCHHQ07283 1943 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 E9PMD0 336 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 CUTAO60888 179 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 NBNO60934 754 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 DGAT1O75907 488 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 EYA4O95677 639 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 NCLP19338 710 aaKnown RBP14.41□□□□□ -0.1
SMPD1-202ENST00000526280 DNM2P50570 870 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 POLGP54098 1239 aaPredicted RBP14.41□□□□□ -0.1
SMPD1-202ENST00000526280 EPHB4P54760 987 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 TMEM62Q0P6H9 643 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 DRP2Q13474 957 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 ZRSR1Q15695 479 aaKnown RBP14.41□□□□□ -0.1
SMPD1-202ENST00000526280 TMEM119Q4V9L6 283 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 HABP4Q5JVS0 413 aaKnown RBP14.41□□□□□ -0.1
SMPD1-202ENST00000526280 AXDND1Q5T1B0 1012 aaPredicted RBP14.41□□□□□ -0.1
SMPD1-202ENST00000526280 C16orf59Q7L2K0 433 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 KCNK18Q7Z418 384 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 RPUSD2Q8IZ73 545 aaKnown RBP14.41□□□□□ -0.1
SMPD1-202ENST00000526280 SYMPKQ92797 1274 aaKnown RBP14.41□□□□□ -0.1
SMPD1-202ENST00000526280 CALML4Q96GE6 196 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 CCDC43Q96MW1 224 aaKnown RBP14.41□□□□□ -0.1
SMPD1-202ENST00000526280 MAP7D2Q96T17 732 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 PRO3102Q9H379 93 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 IL23AQ9NPF7 189 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 CDY2AQ9Y6F7 541 aa14.41□□□□□ -0.1
SMPD1-202ENST00000526280 TANC1Q9C0D5 1861 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 SCN5AQ14524 2016 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 ARID2Q68CP9 1835 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 ARHGEF35A5YM69 484 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 M0QZ92 97 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 GAS2O43903 313 aaKnown RBP14.4□□□□□ -0.1
SMPD1-202ENST00000526280 GPR32O75388 356 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 CXCL10P02778 98 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 VTNP04004 478 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 ME1P48163 572 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 EMC2Q15006 297 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 KARSQ15046 597 aaKnown RBP14.4□□□□□ -0.1
SMPD1-202ENST00000526280 PADI6Q6TGC4 694 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 DEFB128Q7Z7B8 93 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 ZNF710Q8N1W2 664 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 LEO1Q8WVC0 666 aaPredicted RBP14.4□□□□□ -0.1
SMPD1-202ENST00000526280 CDK5RAP3Q96JB5 506 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 PLIN2Q99541 437 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 MTRQ99707 1265 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 CELF4Q9BZC1 486 aaKnown RBP14.4□□□□□ -0.1
SMPD1-202ENST00000526280 OSBPL7Q9BZF2 842 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 UBE2OQ9C0C9 1292 aaKnown RBP14.4□□□□□ -0.1
SMPD1-202ENST00000526280 SCAND2PQ9GZW5 306 aaPredicted RBP14.4□□□□□ -0.1
SMPD1-202ENST00000526280 BHMT2Q9H2M3 363 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 XPNPEP1Q9NQW7 623 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 CHMP5Q9NZZ3 219 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 SUCLA2Q9P2R7 463 aaPredicted RBP14.4□□□□□ -0.1
SMPD1-202ENST00000526280 PCDHA7Q9UN72 937 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 AKT3Q9Y243 479 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 TRPV2Q9Y5S1 764 aa14.4□□□□□ -0.1
SMPD1-202ENST00000526280 TET1Q8NFU7 2136 aa14.39□□□□□ -0.11
SMPD1-202ENST00000526280 PFKMP08237 780 aa14.39□□□□□ -0.11
SMPD1-202ENST00000526280 ACRP10323 421 aa14.39□□□□□ -0.11
SMPD1-202ENST00000526280 CYP11B2P19099 503 aa14.39□□□□□ -0.11
SMPD1-202ENST00000526280 PLCG1P19174 1290 aa14.39□□□□□ -0.11
SMPD1-202ENST00000526280 NLRP11P59045 1033 aaKnown RBP14.39□□□□□ -0.11
SMPD1-202ENST00000526280 CDC42EP1Q00587 391 aa14.39□□□□□ -0.11
SMPD1-202ENST00000526280 TMEM143Q96AN5 459 aa14.39□□□□□ -0.11
SMPD1-202ENST00000526280 SPATA32Q96LK8 384 aa14.39□□□□□ -0.11
SMPD1-202ENST00000526280 ADAMTS10Q9H324 1103 aa14.39□□□□□ -0.11
SMPD1-202ENST00000526280 CDHR5Q9HBB8 845 aa14.39□□□□□ -0.11
SMPD1-202ENST00000526280 ATP6V0A4Q9HBG4 840 aa14.39□□□□□ -0.11
SMPD1-202ENST00000526280 BMP2KQ9NSY1 1161 aaPredicted RBP14.39□□□□□ -0.11
SMPD1-202ENST00000526280 SQORQ9Y6N5 450 aa14.39□□□□□ -0.11
SMPD1-202ENST00000526280 RANBP2P49792 3224 aaKnown RBP14.38□□□□□ -0.11
SMPD1-202ENST00000526280 USO1O60763 962 aaKnown RBP14.38□□□□□ -0.11
SMPD1-202ENST00000526280 TXLNAP40222 546 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms