RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 CPA1P15085 419 aa16.25■□□□□ 0.19
CPSF1-201ENST00000526271 RTN1Q16799 776 aa16.25■□□□□ 0.19
CPSF1-201ENST00000526271 SWSAP1Q6NVH7 229 aa16.25■□□□□ 0.19
CPSF1-201ENST00000526271 SLC24A5Q71RS6 500 aa16.25■□□□□ 0.19
CPSF1-201ENST00000526271 PLA2G4DQ86XP0 818 aa16.25■□□□□ 0.19
CPSF1-201ENST00000526271 ADAMTS10Q9H324 1103 aa16.25■□□□□ 0.19
CPSF1-201ENST00000526271 TLE6Q9H808 572 aa16.25■□□□□ 0.19
CPSF1-201ENST00000526271 PCDHB7Q9Y5E2 793 aa16.25■□□□□ 0.19
CPSF1-201ENST00000526271 MAFBQ9Y5Q3 323 aaPredicted RBP16.25■□□□□ 0.19
CPSF1-201ENST00000526271 M0QZ92 97 aa16.24■□□□□ 0.19
CPSF1-201ENST00000526271 FOSP01100 380 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-201ENST00000526271 PDGFBP01127 241 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-201ENST00000526271 NEFLP07196 543 aa16.24■□□□□ 0.19
CPSF1-201ENST00000526271 ATF7P17544 494 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-201ENST00000526271 ADD1P35611 737 aaKnown RBP16.24■□□□□ 0.19
CPSF1-201ENST00000526271 SLC26A2P50443 739 aa16.24■□□□□ 0.19
CPSF1-201ENST00000526271 CLCN3P51790 818 aa16.24■□□□□ 0.19
CPSF1-201ENST00000526271 AP3B2Q13367 1082 aa16.24■□□□□ 0.19
CPSF1-201ENST00000526271 PDXDC2PQ6P474 469 aa16.24■□□□□ 0.19
CPSF1-201ENST00000526271 TMEM184AQ6ZMB5 413 aa16.24■□□□□ 0.19
CPSF1-201ENST00000526271 RASGRP4Q8TDF6 673 aa16.24■□□□□ 0.19
CPSF1-201ENST00000526271 ZNF668Q96K58 619 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-201ENST00000526271 NEK1Q96PY6 1258 aa16.24■□□□□ 0.19
CPSF1-201ENST00000526271 PHF7Q9BWX1 381 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-201ENST00000526271 ANO2Q9NQ90 1003 aa16.24■□□□□ 0.19
CPSF1-201ENST00000526271 ZNF302Q9NR11 478 aa16.24■□□□□ 0.19
CPSF1-201ENST00000526271 TLR9Q9NR96 1032 aa16.24■□□□□ 0.19
CPSF1-201ENST00000526271 LRFN2Q9ULH4 789 aa16.24■□□□□ 0.19
CPSF1-201ENST00000526271 IPO5O00410 1097 aaKnown RBP16.23■□□□□ 0.19
CPSF1-201ENST00000526271 ZBTB43O43298 467 aa16.23■□□□□ 0.19
CPSF1-201ENST00000526271 CRYBB1P53674 252 aaPredicted RBP16.23■□□□□ 0.19
CPSF1-201ENST00000526271 UBE3AQ05086 875 aa16.23■□□□□ 0.19
CPSF1-201ENST00000526271 UGCGQ16739 394 aa16.23■□□□□ 0.19
CPSF1-201ENST00000526271 ZNF484Q5JVG2 852 aa16.23■□□□□ 0.19
CPSF1-201ENST00000526271 CLLU1OSQ5K130 101 aa16.23■□□□□ 0.19
CPSF1-201ENST00000526271 ERICH6BQ5W0A0 696 aa16.23■□□□□ 0.19
CPSF1-201ENST00000526271 TRMT1LQ7Z2T5 733 aaKnown RBP16.23■□□□□ 0.19
CPSF1-201ENST00000526271 GJA10Q969M2 543 aa16.23■□□□□ 0.19
CPSF1-201ENST00000526271 RPGRIP1Q96KN7 1286 aa16.23■□□□□ 0.19
CPSF1-201ENST00000526271 MFSD14AQ96MC6 490 aa16.23■□□□□ 0.19
CPSF1-201ENST00000526271 APOL5Q9BWW9 433 aa16.23■□□□□ 0.19
CPSF1-201ENST00000526271 RBM28Q9NW13 759 aaKnown RBP16.23■□□□□ 0.19
CPSF1-201ENST00000526271 TMEM161AQ9NX61 479 aa16.23■□□□□ 0.19
CPSF1-201ENST00000526271 BACH1O14867 736 aa16.22■□□□□ 0.19
CPSF1-201ENST00000526271 PLCB3Q01970 1234 aa16.22■□□□□ 0.19
CPSF1-201ENST00000526271 DRP2Q13474 957 aa16.22■□□□□ 0.19
CPSF1-201ENST00000526271 PFKFB3Q16875 520 aaPredicted RBP16.22■□□□□ 0.19
CPSF1-201ENST00000526271 TSGA10IPQ3SY00 556 aa16.22■□□□□ 0.19
CPSF1-201ENST00000526271 PLPP4Q5VZY2 271 aa16.22■□□□□ 0.19
CPSF1-201ENST00000526271 ANKRD54Q6NXT1 300 aa16.22■□□□□ 0.19
CPSF1-201ENST00000526271 DHX32Q7L7V1 743 aaKnown RBP16.22■□□□□ 0.19
CPSF1-201ENST00000526271 ZNF598Q86UK7 904 aaKnown RBP16.22■□□□□ 0.19
CPSF1-201ENST00000526271 LRRC71Q8N4P6 559 aa16.22■□□□□ 0.19
CPSF1-201ENST00000526271 PBXIP1Q96AQ6 731 aa16.22■□□□□ 0.19
CPSF1-201ENST00000526271 CEP89Q96ST8 783 aa16.22■□□□□ 0.19
CPSF1-201ENST00000526271 SMOC2Q9H3U7 446 aa16.22■□□□□ 0.19
CPSF1-201ENST00000526271 C1orf112Q9NSG2 853 aa16.22■□□□□ 0.19
CPSF1-201ENST00000526271 DENND4AQ7Z401 1863 aa16.22■□□□□ 0.19
CPSF1-201ENST00000526271 RIF1Q5UIP0 2472 aaKnown RBP16.22■□□□□ 0.19
CPSF1-201ENST00000526271 KLF18A0A0U1RQI7 1052 aa16.21■□□□□ 0.19
CPSF1-201ENST00000526271 GOLGA8AA7E2F4 631 aa16.21■□□□□ 0.19
CPSF1-201ENST00000526271 GOLGA8BA8MQT2 603 aa16.21■□□□□ 0.19
CPSF1-201ENST00000526271 STBD1O95210 358 aa16.21■□□□□ 0.19
CPSF1-201ENST00000526271 FGFR4P22455 802 aa16.21■□□□□ 0.19
CPSF1-201ENST00000526271 NTRK3Q16288 839 aa16.21■□□□□ 0.19
CPSF1-201ENST00000526271 TMEM173Q86WV6 379 aaPredicted RBP16.21■□□□□ 0.19
CPSF1-201ENST00000526271 BBXQ8WY36 941 aaPredicted RBP16.21■□□□□ 0.19
CPSF1-201ENST00000526271 MRPS27Q92552 414 aaKnown RBP16.21■□□□□ 0.19
CPSF1-201ENST00000526271 ZMYND12Q9H0C1 365 aa16.21■□□□□ 0.19
CPSF1-201ENST00000526271 ELAC1Q9H777 363 aaKnown RBP16.21■□□□□ 0.19
CPSF1-201ENST00000526271 GABBR1Q9UBS5 961 aa16.21■□□□□ 0.19
CPSF1-201ENST00000526271 PCDHB12Q9Y5F1 795 aa16.21■□□□□ 0.19
CPSF1-201ENST00000526271 WDR87Q6ZQQ6 2873 aa16.21■□□□□ 0.19
CPSF1-201ENST00000526271 NID2Q14112 1375 aa16.21■□□□□ 0.19
CPSF1-201ENST00000526271 ESYT2A0FGR8 921 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 DENND3A2RUS2 1198 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 B4GALT3O60512 393 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 SP100P23497 879 aaPredicted RBP16.2■□□□□ 0.18
CPSF1-201ENST00000526271 CIITAP33076 1130 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 FAM160B1Q5W0V3 765 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 ZNF746Q6NUN9 644 aaPredicted RBP16.2■□□□□ 0.18
CPSF1-201ENST00000526271 KANK3Q6NY19 840 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 MIS18BP1Q6P0N0 1132 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 KCNT2Q6UVM3 1135 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 ECHDC2Q86YB7 292 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 TEX2Q8IWB9 1127 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 THNSL1Q8IYQ7 743 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 FBXL6Q8N531 539 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 MICAL1Q8TDZ2 1067 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 TMEM117Q9H0C3 514 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 FAM86C1Q9NVL1 165 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 LZTS1Q9Y250 596 aa16.2■□□□□ 0.18
CPSF1-201ENST00000526271 C2orf16Q68DN1 1984 aa16.19■□□□□ 0.18
CPSF1-201ENST00000526271 TMEM150BA6NC51 233 aa16.19■□□□□ 0.18
CPSF1-201ENST00000526271 MEIS3P2A8K0S8 358 aa16.19■□□□□ 0.18
CPSF1-201ENST00000526271 hCG_1984214I3L0E3 225 aa16.19■□□□□ 0.18
CPSF1-201ENST00000526271 GPR182O15218 404 aa16.19■□□□□ 0.18
CPSF1-201ENST00000526271 CSDE1O75534 798 aaKnown RBP16.19■□□□□ 0.18
CPSF1-201ENST00000526271 TECP42680 631 aa16.19■□□□□ 0.18
CPSF1-201ENST00000526271 NLRP11P59045 1033 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms