RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 TIGD7Q6NT04 549 aaPredicted RBP6.02□□□□□ -1.45
CD44-220ENST00000525688 TEPPQ6URK8 271 aa6.02□□□□□ -1.45
CD44-220ENST00000525688 ETV3LQ6ZN32 361 aa6.02□□□□□ -1.45
CD44-220ENST00000525688 TTLL7Q6ZT98 887 aa6.02□□□□□ -1.45
CD44-220ENST00000525688 KCNK18Q7Z418 384 aa6.02□□□□□ -1.45
CD44-220ENST00000525688 C14orf80Q86SX3 495 aa6.02□□□□□ -1.45
CD44-220ENST00000525688 PROSER1Q86XN7 944 aa6.02□□□□□ -1.45
CD44-220ENST00000525688 CCAR1Q8IX12 1150 aaKnown RBP6.02□□□□□ -1.45
CD44-220ENST00000525688 HIPK4Q8NE63 616 aa6.02□□□□□ -1.45
CD44-220ENST00000525688 CPA5Q8WXQ8 436 aa6.02□□□□□ -1.45
CD44-220ENST00000525688 GOLGA6AQ9NYA3 693 aa6.02□□□□□ -1.45
CD44-220ENST00000525688 GABBR1Q9UBS5 961 aa6.02□□□□□ -1.45
CD44-220ENST00000525688 PPP2R3BQ9Y5P8 575 aa6.02□□□□□ -1.45
CD44-220ENST00000525688 FGD5Q6ZNL6 1462 aa6.02□□□□□ -1.45
CD44-220ENST00000525688 SOGA1O94964 1423 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 PRPF3O43395 683 aaKnown RBP6.01□□□□□ -1.45
CD44-220ENST00000525688 PRPF6O94906 941 aaKnown RBP6.01□□□□□ -1.45
CD44-220ENST00000525688 PF4V1P10720 104 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 AGXTP21549 392 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 PTGS1P23219 599 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 GNALP38405 381 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 GP2P55259 537 aaKnown RBP6.01□□□□□ -1.45
CD44-220ENST00000525688 MRPS9P82933 396 aaKnown RBP6.01□□□□□ -1.45
CD44-220ENST00000525688 GTF2H3Q13889 308 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 UGT8Q16880 541 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 CR1LQ2VPA4 569 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 EFCAB2Q5VUJ9 269 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 OLFML2BQ68BL8 750 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 CCSAPQ6IQ19 270 aaPredicted RBP6.01□□□□□ -1.45
CD44-220ENST00000525688 RAX2Q96IS3 184 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 TUBGCP5Q96RT8 1024 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 ANO3Q9BYT9 981 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 MAF1Q9H063 256 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 POFUT1Q9H488 388 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 DNAJC28Q9NX36 388 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 TMPRSS11EQ9UL52 423 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 NUMBLQ9Y6R0 609 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 RAD54L2Q9Y4B4 1467 aa6.01□□□□□ -1.45
CD44-220ENST00000525688 WRNQ14191 1432 aaPredicted RBP eCLIP6□□□□□ -1.45
CD44-220ENST00000525688 PRSS38A1L453 326 aa6□□□□□ -1.45
CD44-220ENST00000525688 PRAMEF22A3QJZ6 481 aa6□□□□□ -1.45
CD44-220ENST00000525688 ZNF839A8K0R7 811 aa6□□□□□ -1.45
CD44-220ENST00000525688 NFIBO00712 420 aa6□□□□□ -1.45
CD44-220ENST00000525688 ZRANB2O95218 330 aaKnown RBP eCLIP6□□□□□ -1.45
CD44-220ENST00000525688 GLI1P08151 1106 aa6□□□□□ -1.45
CD44-220ENST00000525688 ENO2P09104 434 aaPredicted RBP6□□□□□ -1.45
CD44-220ENST00000525688 CT47B1P0C2W7 299 aaPredicted RBP6□□□□□ -1.45
CD44-220ENST00000525688 MTHFD2P13995 350 aa6□□□□□ -1.45
CD44-220ENST00000525688 ATF3P18847 181 aa6□□□□□ -1.45
CD44-220ENST00000525688 FBLN1P23142 703 aa6□□□□□ -1.45
CD44-220ENST00000525688 CYP2C19P33261 490 aa6□□□□□ -1.45
CD44-220ENST00000525688 THBS2P35442 1172 aa6□□□□□ -1.45
CD44-220ENST00000525688 PDE6BP35913 854 aa6□□□□□ -1.45
CD44-220ENST00000525688 SLC6A3Q01959 620 aa6□□□□□ -1.45
CD44-220ENST00000525688 ROM1Q03395 351 aa6□□□□□ -1.45
CD44-220ENST00000525688 MYBPC3Q14896 1274 aa6□□□□□ -1.45
CD44-220ENST00000525688 CPEB4Q17RY0 729 aaKnown RBP eCLIP6□□□□□ -1.45
CD44-220ENST00000525688 GFOD2Q3B7J2 385 aa6□□□□□ -1.45
CD44-220ENST00000525688 CT83Q5H943 113 aa6□□□□□ -1.45
CD44-220ENST00000525688 ZBTB41Q5SVQ8 909 aa6□□□□□ -1.45
CD44-220ENST00000525688 PRAMEF18Q5VWM3 479 aa6□□□□□ -1.45
CD44-220ENST00000525688 KIAA1841Q6NSI8 718 aa6□□□□□ -1.45
CD44-220ENST00000525688 IGDCC4Q8TDY8 1250 aa6□□□□□ -1.45
CD44-220ENST00000525688 TGFBRAP1Q8WUH2 860 aa6□□□□□ -1.45
CD44-220ENST00000525688 RSAD2Q8WXG1 361 aa6□□□□□ -1.45
CD44-220ENST00000525688 JADE3Q92613 823 aa6□□□□□ -1.45
CD44-220ENST00000525688 ALG3Q92685 438 aa6□□□□□ -1.45
CD44-220ENST00000525688 ERCC4Q92889 916 aaPredicted RBP6□□□□□ -1.45
CD44-220ENST00000525688 HSPBAP1Q96EW2 488 aa6□□□□□ -1.45
CD44-220ENST00000525688 TEKT5Q96M29 485 aa6□□□□□ -1.45
CD44-220ENST00000525688 AIFM3Q96NN9 605 aa6□□□□□ -1.45
CD44-220ENST00000525688 MYL10Q9BUA6 226 aa6□□□□□ -1.45
CD44-220ENST00000525688 RNF38Q9H0F5 515 aa6□□□□□ -1.45
CD44-220ENST00000525688 ZNF552Q9H707 407 aaPredicted RBP6□□□□□ -1.45
CD44-220ENST00000525688 ARHGAP28Q9P2N2 729 aa6□□□□□ -1.45
CD44-220ENST00000525688 NOB1Q9ULX3 412 aaKnown RBP6□□□□□ -1.45
CD44-220ENST00000525688 INVSQ9Y283 1065 aa6□□□□□ -1.45
CD44-220ENST00000525688 GPR45Q9Y5Y3 372 aa6□□□□□ -1.45
CD44-220ENST00000525688 IRS2Q9Y4H2 1338 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 EIF4G3O43432 1585 aaKnown RBP5.99□□□□□ -1.45
CD44-220ENST00000525688 AQRO60306 1485 aaKnown RBP eCLIP5.99□□□□□ -1.45
CD44-220ENST00000525688 XPOTO43592 962 aaKnown RBP5.99□□□□□ -1.45
CD44-220ENST00000525688 SH3BP5O60239 455 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 CAND2O75155 1236 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 ASGR2P07307 311 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 MC4RP32245 332 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 ZEB1P37275 1124 aaPredicted RBP5.99□□□□□ -1.45
CD44-220ENST00000525688 NKX3-2P78367 333 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 HTRA3P83110 453 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 ADCY2Q08462 1091 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 CLUL1Q15846 466 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 PITRM1Q5JRX3 1037 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 ZFYVE27Q5T4F4 411 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 SLFN12LQ6IEE8 588 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 TSHZ1Q6ZSZ6 1077 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 ZC3H18Q86VM9 953 aaKnown RBP5.99□□□□□ -1.45
CD44-220ENST00000525688 SLC41A1Q8IVJ1 513 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 TPH2Q8IWU9 490 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 CCDC146Q8IYE0 955 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 CALML6Q8TD86 181 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms