RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 TCTN3Q6NUS6 607 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 ARHGAP36Q6ZRI8 547 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 FBXW5Q969U6 566 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 KRTAP17-1Q9BYP8 105 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 FBXO10Q9UK96 956 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 ATP23Q9Y6H3 246 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 SPAG9O60271 1321 aaKnown RBP4.37□□□□□ -1.71
CSDE1-208ENST00000524652 NAIPQ13075 1403 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 AGLP35573 1532 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 PRDM15P57071 1507 aaPredicted RBP4.36□□□□□ -1.71
CSDE1-208ENST00000524652 CAMSAP1Q5T5Y3 1602 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 MROH2AA6NES4 1674 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 E9PCH4 1651 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 ZC3H13Q5T200 1668 aaKnown RBP4.36□□□□□ -1.71
CSDE1-208ENST00000524652 FAM90A27PA6NNH2 459 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 MAN2B1O00754 1011 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 FZD7O75084 574 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 FSHBP01225 129 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 ZNF888P0CJ79 500 aaPredicted RBP4.36□□□□□ -1.71
CSDE1-208ENST00000524652 ETV4P43268 484 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 RAC3P60763 192 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 FAM47CQ5HY64 1035 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 SPDYAQ5MJ70 313 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 C16orf59Q7L2K0 433 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 Q8N1X5 172 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 PCDH19Q8TAB3 1148 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 NEIL1Q96FI4 390 aaPredicted RBP4.36□□□□□ -1.71
CSDE1-208ENST00000524652 GNRHR2Q96P88 292 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 SORCS2Q96PQ0 1159 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 LRRC37BQ96QE4 947 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 ZNF747Q9BV97 191 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 VPS11Q9H270 941 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 MSL2Q9HCI7 577 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 SLC39A2Q9NP94 309 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 RIC8BQ9NVN3 520 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 ARHGAP28Q9P2N2 729 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 PCDHA8Q9Y5H6 950 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 MYO5BQ9ULV0 1848 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 VWDEQ8N2E2 1590 aa4.36□□□□□ -1.71
CSDE1-208ENST00000524652 IQGAP3Q86VI3 1631 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.35□□□□□ -1.71
CSDE1-208ENST00000524652 ZNF561-AS1K7EIQ3 104 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 FOXS1O43638 330 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 AMY2AP04746 511 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 PYGMP11217 842 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 PDE6AP16499 860 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 AMY2BP19961 511 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 PTGS1P23219 599 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 AOAHP28039 575 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 ACVRL1P37023 503 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 HERVK_113P62684 666 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 ST5P78524 1137 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 GUCY1A3Q02108 690 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 PRKD1Q15139 912 aaPredicted RBP4.35□□□□□ -1.71
CSDE1-208ENST00000524652 CRY1Q16526 586 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 NAALADL2Q58DX5 795 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 ZC3H12BQ5HYM0 836 aaKnown RBP4.35□□□□□ -1.71
CSDE1-208ENST00000524652 FAM209AQ5JX71 171 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 EP400NLQ6ZTU2 488 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 USP51Q70EK9 711 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 CXXC5Q7LFL8 322 aaKnown RBP4.35□□□□□ -1.71
CSDE1-208ENST00000524652 GIMAP8Q8ND71 665 aaPredicted RBP4.35□□□□□ -1.71
CSDE1-208ENST00000524652 SCYL1Q96KG9 808 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 INCENPQ9NQS7 918 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 RRP7BPQ9NSQ0 103 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 CATSPERZQ9NTU4 200 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 SIRPGQ9P1W8 387 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 PFDN2Q9UHV9 154 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 CBLCQ9ULV8 474 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 ZFR2Q9UPR6 939 aaKnown RBP4.35□□□□□ -1.71
CSDE1-208ENST00000524652 ROCK1Q13464 1354 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 DHX29Q7Z478 1369 aaKnown RBP4.35□□□□□ -1.71
CSDE1-208ENST00000524652 KIF15Q9NS87 1388 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 HFM1A2PYH4 1435 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 ERBINQ96RT1 1412 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 PREX1Q8TCU6 1659 aa4.35□□□□□ -1.71
CSDE1-208ENST00000524652 ESYT3A0FGR9 886 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 CLASP2O75122 1294 aaKnown RBP4.34□□□□□ -1.71
CSDE1-208ENST00000524652 TSPY4P0CV99 314 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 TSPY10P0CW01 314 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 COMTP21964 271 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 IL13RA1P78552 427 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 STILQ15468 1287 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 FOXB2Q5VYV0 432 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 TAX1BP1Q86VP1 789 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 OSTM1Q86WC4 334 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 PTRH1Q86Y79 214 aaKnown RBP4.34□□□□□ -1.71
CSDE1-208ENST00000524652 EDAQ92838 391 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 WNK4Q96J92 1243 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 EXOC2Q96KP1 924 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 DHRS4Q9BTZ2 278 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 ZDHHC5Q9C0B5 715 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 SCAND2PQ9GZW5 306 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-208ENST00000524652 GALNT8Q9NY28 637 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 OAZ3Q9UMX2 235 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 PTPN22Q9Y2R2 807 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 SLC30A1Q9Y6M5 507 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 ANKRD30AQ9BXX3 1397 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 ANKRD50Q9ULJ7 1429 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 KDM5DQ9BY66 1539 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms