RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 SPATA1Q5VX52 437 aa7.88□□□□□ -1.15
VPS11-201ENST00000524454 IQSEC1Q6DN90 963 aa7.88□□□□□ -1.15
VPS11-201ENST00000524454 XRRA1Q6P2D8 792 aa7.88□□□□□ -1.15
VPS11-201ENST00000524454 PDILTQ8N807 584 aa7.88□□□□□ -1.15
VPS11-201ENST00000524454 CCDC150Q8NCX0 1101 aa7.88□□□□□ -1.15
VPS11-201ENST00000524454 GIMAP8Q8ND71 665 aaPredicted RBP7.88□□□□□ -1.15
VPS11-201ENST00000524454 ANKK1Q8NFD2 765 aa7.88□□□□□ -1.15
VPS11-201ENST00000524454 ERMNQ8TAM6 284 aa7.88□□□□□ -1.15
VPS11-201ENST00000524454 NSUN6Q8TEA1 469 aaKnown RBP7.88□□□□□ -1.15
VPS11-201ENST00000524454 NOC3LQ8WTT2 800 aaKnown RBP7.88□□□□□ -1.15
VPS11-201ENST00000524454 TRIM43Q96BQ3 446 aaPredicted RBP7.88□□□□□ -1.15
VPS11-201ENST00000524454 PDLIM7Q9NR12 457 aa7.88□□□□□ -1.15
VPS11-201ENST00000524454 KCND1Q9NSA2 647 aa7.88□□□□□ -1.15
VPS11-201ENST00000524454 DNAH12Q6ZR08 3092 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 GRIN2DO15399 1336 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 MOXD2PA6NHM9 499 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 LRRC10BA6NIK2 292 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 GOLGA8CPA6NN73 597 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 SLC37A4O43826 429 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 RGS20O76081 388 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 RPN1P04843 607 aaKnown RBP7.87□□□□□ -1.15
VPS11-201ENST00000524454 NR3C2P08235 984 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 PLCG1P19174 1290 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 DNAJB2P25686 324 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 TERF1P54274 439 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 STXBP2Q15833 593 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 SWT1Q5T5J6 900 aaKnown RBP7.87□□□□□ -1.15
VPS11-201ENST00000524454 CDKAL1Q5VV42 579 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 PCSK9Q8NBP7 692 aaKnown RBP7.87□□□□□ -1.15
VPS11-201ENST00000524454 CCDC112Q8NEF3 446 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 RASSF8Q8NHQ8 419 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 ETNPPLQ8TBG4 499 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 SCFD2Q8WU76 684 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 IQCDQ96DY2 449 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 DHTKD1Q96HY7 919 aaPredicted RBP7.87□□□□□ -1.15
VPS11-201ENST00000524454 GLT1D1Q96MS3 346 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 MPHOSPH6Q99547 160 aaKnown RBP7.87□□□□□ -1.15
VPS11-201ENST00000524454 MTRQ99707 1265 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 GDF15Q99988 308 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 PDCD2LQ9BRP1 358 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 TSEN34Q9BSV6 310 aaKnown RBP7.87□□□□□ -1.15
VPS11-201ENST00000524454 MMTAG2Q9BU76 263 aaKnown RBP7.87□□□□□ -1.15
VPS11-201ENST00000524454 TRIM9Q9C026 710 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 HSD3B7Q9H2F3 369 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 PRO3102Q9H379 93 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 BCAS3Q9H6U6 928 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 TMEM134Q9H6X4 195 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 TTC12Q9H892 705 aaPredicted RBP7.87□□□□□ -1.15
VPS11-201ENST00000524454 SPTLC3Q9NUV7 552 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 PCDHA12Q9UN75 941 aa7.87□□□□□ -1.15
VPS11-201ENST00000524454 A0A0U1RQG5 324 aaPredicted RBP7.86□□□□□ -1.15
VPS11-201ENST00000524454 BICDL2A1A5D9 508 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 BIN1O00499 593 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 SOX1O00570 391 aaPredicted RBP7.86□□□□□ -1.15
VPS11-201ENST00000524454 PSMA7O14818 248 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 EDIL3O43854 480 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 KIF20AO95235 890 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 TDP2O95551 362 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 CLTBP09497 229 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 EEF1GP26641 437 aaKnown RBP7.86□□□□□ -1.15
VPS11-201ENST00000524454 CCND2P30279 289 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 PURAQ00577 322 aaKnown RBP7.86□□□□□ -1.15
VPS11-201ENST00000524454 FANCCQ00597 558 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 ARHGAP1Q07960 439 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 FAAP100Q0VG06 881 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 PAK1Q13153 545 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 TTLL4Q14679 1199 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 KARSQ15046 597 aaKnown RBP7.86□□□□□ -1.15
VPS11-201ENST00000524454 CCDC62Q6P9F0 684 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.86□□□□□ -1.15
VPS11-201ENST00000524454 SV2BQ7L1I2 683 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 ADSSL1Q8N142 457 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 ANKRD20A12PQ8NF67 263 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 NEK9Q8TD19 979 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 AFG1LQ8WV93 481 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 LARP4BQ92615 738 aaKnown RBP7.86□□□□□ -1.15
VPS11-201ENST00000524454 HAS1Q92839 578 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 BADQ92934 168 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 LENG9Q96B70 501 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 CDK5RAP3Q96JB5 506 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 IWS1Q96ST2 819 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 POLR3CQ9BUI4 534 aaPredicted RBP7.86□□□□□ -1.15
VPS11-201ENST00000524454 PPP1R12CQ9BZL4 782 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 UBE2OQ9C0C9 1292 aaKnown RBP7.86□□□□□ -1.15
VPS11-201ENST00000524454 TMEM260Q9NX78 707 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 KCND2Q9NZV8 630 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 PRKAG2Q9UGJ0 569 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 NFE2L3Q9Y4A8 694 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 TELO2Q9Y4R8 837 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.86□□□□□ -1.15
VPS11-201ENST00000524454 CEP290O15078 2479 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 LOXHD1Q8IVV2 1947 aa7.86□□□□□ -1.15
VPS11-201ENST00000524454 ITIH6Q6UXX5 1313 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 SCN5AQ14524 2016 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 SCN10AQ9Y5Y9 1956 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 IGLV3-22A0A075B6J6 115 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 LOC102724159A0A0B4J2E5 919 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 A0A1B0GTH6 734 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 B4DLN1 442 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 ARVCFO00192 962 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms