RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	INPP5F	Q9Y2H2	1132 aa		5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	COL4A3BP	Q9Y5P4	624 aa		5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	GLI2	P10070	1586 aa		5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	TNIK	Q9UKE5	1360 aa		5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	RUSC2	Q8N2Y8	1516 aa		5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	IBSP	P21815	317 aa	Predicted RBP	5.78	□□□□□ -1.48
PCM1-223	ENST00000524356	SOX9	P48436	509 aa		5.78	□□□□□ -1.48
PCM1-223	ENST00000524356	CRHR2	Q13324	411 aa		5.78	□□□□□ -1.48
PCM1-223	ENST00000524356	GORAB	Q5T7V8	394 aa		5.78	□□□□□ -1.48
PCM1-223	ENST00000524356	MRGPRE	Q86SM8	312 aa		5.78	□□□□□ -1.48
PCM1-223	ENST00000524356	C1orf159	Q96HA4	380 aa		5.78	□□□□□ -1.48
PCM1-223	ENST00000524356	ZDHHC5	Q9C0B5	715 aa		5.78	□□□□□ -1.48
PCM1-223	ENST00000524356	NELFA	Q9H3P2	528 aa		5.78	□□□□□ -1.48
PCM1-223	ENST00000524356	SLC39A2	Q9NP94	309 aa		5.78	□□□□□ -1.48
PCM1-223	ENST00000524356	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.78	□□□□□ -1.48
PCM1-223	ENST00000524356	DDX41	Q9UJV9	622 aa	Known RBP	5.78	□□□□□ -1.48
PCM1-223	ENST00000524356	PTPRM	P28827	1452 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	UACA	Q9BZF9	1416 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356		A0A0A6YYK5	440 aa	Predicted RBP	5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	CCDC194	A0A1B0GVG4	234 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	ACOT7	O00154	380 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	CYP27B1	O15528	508 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	PEX14	O75381	377 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	COL9A2	Q14055	689 aa	Predicted RBP	5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	PLEKHG6	Q3KR16	790 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	SOGA3	Q5TF21	947 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	OTOP3	Q7RTS5	596 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	VRK3	Q8IV63	474 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	UHMK1	Q8TAS1	419 aa	Known RBP	5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	TMEM176A	Q96HP8	235 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	NRDE2	Q9H7Z3	1164 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	AGO3	Q9H9G7	860 aa	Known RBP	5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	PCDH12	Q9NPG4	1184 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	BCCIP	Q9P287	314 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	CHPF2	Q9P2E5	772 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	ZNHIT2	Q9UHR6	403 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	NPFFR2	Q9Y5X5	522 aa		5.77	□□□□□ -1.49
PCM1-223	ENST00000524356	STK10	O94804	968 aa	Known RBP	5.76	□□□□□ -1.49
PCM1-223	ENST00000524356	CP	P00450	1065 aa		5.76	□□□□□ -1.49
PCM1-223	ENST00000524356	NAT2	P11245	290 aa		5.76	□□□□□ -1.49
PCM1-223	ENST00000524356	CASP7	P55210	303 aa		5.76	□□□□□ -1.49
PCM1-223	ENST00000524356	GFRA1	P56159	465 aa		5.76	□□□□□ -1.49
PCM1-223	ENST00000524356	TAF7L	Q5H9L4	462 aa		5.76	□□□□□ -1.49
PCM1-223	ENST00000524356	RNF187	Q5TA31	235 aa	Predicted RBP	5.76	□□□□□ -1.49
PCM1-223	ENST00000524356	USP30	Q70CQ3	517 aa		5.76	□□□□□ -1.49
PCM1-223	ENST00000524356	FILIP1	Q7Z7B0	1213 aa		5.76	□□□□□ -1.49
PCM1-223	ENST00000524356	TMEM145	Q8NBT3	493 aa		5.76	□□□□□ -1.49
PCM1-223	ENST00000524356	ZCRB1	Q8TBF4	217 aa	Known RBP	5.76	□□□□□ -1.49
PCM1-223	ENST00000524356	IFT57	Q9NWB7	429 aa		5.76	□□□□□ -1.49
PCM1-223	ENST00000524356	EFR3B	Q9Y2G0	817 aa		5.76	□□□□□ -1.49
PCM1-223	ENST00000524356	CD109	Q6YHK3	1445 aa		5.75	□□□□□ -1.49
PCM1-223	ENST00000524356	ENPP3	O14638	875 aa		5.75	□□□□□ -1.49
PCM1-223	ENST00000524356	RHOBTB3	O94955	611 aa		5.75	□□□□□ -1.49
PCM1-223	ENST00000524356	CLSTN1	O94985	981 aa		5.75	□□□□□ -1.49
PCM1-223	ENST00000524356	HMGCR	P04035	888 aa		5.75	□□□□□ -1.49
PCM1-223	ENST00000524356	SCNN1G	P51170	649 aa		5.75	□□□□□ -1.49
PCM1-223	ENST00000524356	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.75	□□□□□ -1.49
PCM1-223	ENST00000524356	ZNF227	Q86WZ6	799 aa		5.75	□□□□□ -1.49
PCM1-223	ENST00000524356	ADGRG3	Q86Y34	549 aa		5.75	□□□□□ -1.49
PCM1-223	ENST00000524356	ZNF654	Q8IZM8	581 aa		5.75	□□□□□ -1.49
PCM1-223	ENST00000524356	KDM5B	Q9UGL1	1544 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	TOP2B	Q02880	1626 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	MSC	O60682	206 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	KCNJ6	P48051	423 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	KCNQ1	P51787	676 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	SERINC3	Q13530	473 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	TOB2	Q14106	344 aa	Predicted RBP	5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	HSP90AB2P	Q58FF8	381 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356		Q6ZRM9	215 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	MORC4	Q8TE76	937 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	STAG1	Q8WVM7	1258 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	MRFAP1L1	Q96HT8	127 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	SHD	Q96IW2	340 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	PACSIN3	Q9UKS6	424 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	CARMIL1	Q5VZK9	1371 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	UHRF1BP1L	A0JNW5	1464 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	MAP3K4	Q9Y6R4	1608 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	DISP1	Q96F81	1524 aa		5.74	□□□□□ -1.49
PCM1-223	ENST00000524356	ZAR1L	A6NP61	321 aa		5.73	□□□□□ -1.49
PCM1-223	ENST00000524356	COL6A2	P12110	1019 aa		5.73	□□□□□ -1.49
PCM1-223	ENST00000524356	HGFAC	Q04756	655 aa		5.73	□□□□□ -1.49
PCM1-223	ENST00000524356	NFE2L2	Q16236	605 aa		5.73	□□□□□ -1.49
PCM1-223	ENST00000524356	WDR72	Q3MJ13	1102 aa		5.73	□□□□□ -1.49
PCM1-223	ENST00000524356	EPHA10	Q5JZY3	1008 aa		5.73	□□□□□ -1.49
PCM1-223	ENST00000524356	SLC35F1	Q5T1Q4	408 aa		5.73	□□□□□ -1.49
PCM1-223	ENST00000524356	LCE1A	Q5T7P2	110 aa		5.73	□□□□□ -1.49
PCM1-223	ENST00000524356	DPP8	Q6V1X1	898 aa	Predicted RBP	5.73	□□□□□ -1.49
PCM1-223	ENST00000524356	FAM169B	Q8N8A8	192 aa		5.73	□□□□□ -1.49
PCM1-223	ENST00000524356	CCDC140	Q96MF4	163 aa		5.73	□□□□□ -1.49
PCM1-223	ENST00000524356	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
PCM1-223	ENST00000524356	GABBR1	Q9UBS5	961 aa		5.73	□□□□□ -1.49
PCM1-223	ENST00000524356	SH3BP1	Q9Y3L3	701 aa		5.73	□□□□□ -1.49
PCM1-223	ENST00000524356	NKRF	O15226	690 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
PCM1-223	ENST00000524356	ATF4	P18848	351 aa	Predicted RBP	5.72	□□□□□ -1.49
PCM1-223	ENST00000524356	PTGS2	P35354	604 aa		5.72	□□□□□ -1.49
PCM1-223	ENST00000524356	ADCY8	P40145	1251 aa		5.72	□□□□□ -1.49
PCM1-223	ENST00000524356	GJA8	P48165	433 aa		5.72	□□□□□ -1.49
PCM1-223	ENST00000524356	EPHA5	P54756	1037 aa		5.72	□□□□□ -1.49
PCM1-223	ENST00000524356	ZNF362	Q5T0B9	420 aa	Predicted RBP	5.72	□□□□□ -1.49
PCM1-223	ENST00000524356	OR14K1	Q8NGZ2	314 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms