RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 SMAD4Q13485 552 aaKnown RBP5.18□□□□□ -1.58
SKP1-212ENST00000523966 NOLC1Q14978 699 aaKnown RBP eCLIP5.18□□□□□ -1.58
SKP1-212ENST00000523966 PPP2R5AQ15172 486 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.18□□□□□ -1.58
SKP1-212ENST00000523966 EFCAB2Q5VUJ9 269 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 MCTP1Q6DN14 999 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 CNKSR3Q6P9H4 555 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 TRMT10BQ6PF06 316 aaKnown RBP5.18□□□□□ -1.58
SKP1-212ENST00000523966 LRSAM1Q6UWE0 723 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 EAF2Q96CJ1 260 aaPredicted RBP5.18□□□□□ -1.58
SKP1-212ENST00000523966 HOOK2Q96ED9 719 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 AMNQ9BXJ7 453 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 QRSL1Q9H0R6 528 aaKnown RBP5.18□□□□□ -1.58
SKP1-212ENST00000523966 LUC7LQ9NQ29 371 aaKnown RBP5.18□□□□□ -1.58
SKP1-212ENST00000523966 FBXO10Q9UK96 956 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 USP18Q9UMW8 372 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 EDARQ9UNE0 448 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 INVSQ9Y283 1065 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 NUMBLQ9Y6R0 609 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 TNKSO95271 1327 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 MYPNQ86TC9 1320 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 H0Y858 1186 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 PAX4O43316 350 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 NRP2O60462 931 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 PCDH8O95206 1070 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 MPIG6BO95866 241 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 CHGBP05060 677 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 IGFBP6P24592 240 aaPredicted RBP5.17□□□□□ -1.58
SKP1-212ENST00000523966 RECQLP46063 649 aaPredicted RBP5.17□□□□□ -1.58
SKP1-212ENST00000523966 GPR3P46089 330 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 MANFP55145 182 aaKnown RBP5.17□□□□□ -1.58
SKP1-212ENST00000523966 SPIDRQ14159 915 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 PKN1Q16512 942 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 ZNF385BQ569K4 471 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 HSP90AB2PQ58FF8 381 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 PHF19Q5T6S3 580 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 ATG14Q6ZNE5 492 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 FMNL3Q8IVF7 1028 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 CMIPQ8IY22 773 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 CHPFQ8IZ52 775 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 IFNL2Q8IZJ0 200 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 SSH1Q8WYL5 1049 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 HIST1H2AHQ96KK5 128 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 PWWP2AQ96N64 755 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 NOX5Q96PH1 765 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 HIST1H2AJQ99878 128 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 NOL10Q9BSC4 688 aaKnown RBP5.17□□□□□ -1.58
SKP1-212ENST00000523966 SLC13A1Q9BZW2 595 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 SEMA4AQ9H3S1 761 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 L2HGDHQ9H9P8 463 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 GCM1Q9NP62 436 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 KCMF1Q9P0J7 381 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 FTSJ1Q9UET6 329 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 LUC7L2Q9Y383 392 aaKnown RBP5.17□□□□□ -1.58
SKP1-212ENST00000523966 PPP2R3BQ9Y5P8 575 aa5.17□□□□□ -1.58
SKP1-212ENST00000523966 TRIM75PA6NK02 468 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 ELL2O00472 640 aaPredicted RBP5.16□□□□□ -1.58
SKP1-212ENST00000523966 LPLP06858 475 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 RBP3P10745 1247 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 VCAM1P19320 739 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 RAB27AP51159 221 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 SLC5A3P53794 718 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 NRG3P56975 720 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 MRPS9P82933 396 aaKnown RBP5.16□□□□□ -1.58
SKP1-212ENST00000523966 CD83Q01151 205 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 MCL1Q07820 350 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 ADAM9Q13443 819 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 PIN1Q13526 163 aaPredicted RBP5.16□□□□□ -1.58
SKP1-212ENST00000523966 MYBPC3Q14896 1274 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 PCBP2Q15366 365 aaKnown RBP eCLIP5.16□□□□□ -1.58
SKP1-212ENST00000523966 DGKDQ16760 1214 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 INAVAQ3KP66 663 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 TOR2AQ5JU69 321 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 GRAMD4Q6IC98 578 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 KANSL1Q7Z3B3 1105 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 CBARPQ8N350 705 aaPredicted RBP5.16□□□□□ -1.58
SKP1-212ENST00000523966 LINC00482Q8N8I6 264 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 CDYL2Q8N8U2 506 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 AUTS2Q8WXX7 1259 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 SYT3Q9BQG1 590 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 MTG2Q9H4K7 406 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 CCM2LQ9NUG4 571 aaPredicted RBP5.16□□□□□ -1.58
SKP1-212ENST00000523966 ZIM2Q9NZV7 527 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 CHPF2Q9P2E5 772 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 SAE1Q9UBE0 346 aaPredicted RBP5.16□□□□□ -1.58
SKP1-212ENST00000523966 IP6K2Q9UHH9 426 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 ZNF180Q9UJW8 692 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 WASF3Q9UPY6 502 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 RNF114Q9Y508 228 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 KCTD3Q9Y597 815 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 GPR45Q9Y5Y3 372 aa5.16□□□□□ -1.58
SKP1-212ENST00000523966 CUTAO60888 179 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 H2AFYO75367 372 aaKnown RBP5.15□□□□□ -1.59
SKP1-212ENST00000523966 IL18BPO95998 194 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 CYP1A1P04798 512 aaPredicted RBP5.15□□□□□ -1.59
SKP1-212ENST00000523966 U2AF1L5P0DN76 240 aaPredicted RBP5.15□□□□□ -1.59
SKP1-212ENST00000523966 IL13P35225 146 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 ADCY8P40145 1251 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 GPR15P49685 360 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 LGALS4P56470 323 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms