RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 FGFR4P22455 802 aa17.47■□□□□ 0.39
MRPS28-209ENST00000522987 PBX3P40426 434 aa17.47■□□□□ 0.39
MRPS28-209ENST00000522987 NLRP11P59045 1033 aaKnown RBP17.47■□□□□ 0.39
MRPS28-209ENST00000522987 UGCGQ16739 394 aa17.47■□□□□ 0.39
MRPS28-209ENST00000522987 ZNF746Q6NUN9 644 aaPredicted RBP17.47■□□□□ 0.39
MRPS28-209ENST00000522987 THNSL1Q8IYQ7 743 aa17.47■□□□□ 0.39
MRPS28-209ENST00000522987 RNF169Q8NCN4 708 aa17.47■□□□□ 0.39
MRPS28-209ENST00000522987 BBXQ8WY36 941 aaPredicted RBP17.47■□□□□ 0.39
MRPS28-209ENST00000522987 RGS18Q9NS28 235 aa17.47■□□□□ 0.39
MRPS28-209ENST00000522987 TBC1D22BQ9NU19 505 aa17.47■□□□□ 0.39
MRPS28-209ENST00000522987 TYW1Q9NV66 732 aaKnown RBP17.47■□□□□ 0.39
MRPS28-209ENST00000522987 CLEC1BQ9P126 229 aa17.47■□□□□ 0.39
MRPS28-209ENST00000522987 PRKAG3Q9UGI9 489 aa17.47■□□□□ 0.39
MRPS28-209ENST00000522987 MAFBQ9Y5Q3 323 aaPredicted RBP17.47■□□□□ 0.39
MRPS28-209ENST00000522987 TECTAO75443 2155 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 GPR182O15218 404 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 GPR32O75388 356 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 RPS6KB1P23443 525 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 HSPA4P34932 840 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 CRYBB1P53674 252 aaPredicted RBP17.46■□□□□ 0.39
MRPS28-209ENST00000522987 RCAN1P53805 252 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 ERVFC1P60507 584 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 SETQ01105 290 aaPredicted RBP17.46■□□□□ 0.39
MRPS28-209ENST00000522987 EFCAB12Q6NXP0 572 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 SLC24A5Q71RS6 500 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 COLGALT1Q8NBJ5 622 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 CCDC12Q8WUD4 166 aaPredicted RBP17.46■□□□□ 0.39
MRPS28-209ENST00000522987 PPP2R3CQ969Q6 453 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 LENG9Q96B70 501 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 MSLNLQ96KJ4 702 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 APOL5Q9BWW9 433 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 TLE6Q9H808 572 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 ATP6V0A4Q9HBG4 840 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 PCDHB12Q9Y5F1 795 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 PCDHA10Q9Y5I2 948 aa17.46■□□□□ 0.39
MRPS28-209ENST00000522987 TMEM150BA6NC51 233 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 MSH4O15457 936 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 EDIL3O43854 480 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 ZNF862O60290 1169 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 DTNBO60941 627 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 CSDE1O75534 798 aaKnown RBP17.45■□□□□ 0.38
MRPS28-209ENST00000522987 FGF18O76093 207 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 GNA11P29992 359 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 NTRK3Q16288 839 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 NAALADL2Q58DX5 795 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 PLPP4Q5VZY2 271 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 RNF135Q8IUD6 432 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 EFHBQ8N7U6 833 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 KCNB2Q92953 911 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 CCDC136Q96JN2 1154 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 SCLT1Q96NL6 688 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 SH2D3AQ9BRG2 576 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 C1orf112Q9NSG2 853 aa17.45■□□□□ 0.38
MRPS28-209ENST00000522987 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
MRPS28-209ENST00000522987 NLRP5P59047 1200 aa17.44■□□□□ 0.38
MRPS28-209ENST00000522987 PRKCEQ02156 737 aa17.44■□□□□ 0.38
MRPS28-209ENST00000522987 DSC3Q14574 896 aa17.44■□□□□ 0.38
MRPS28-209ENST00000522987 LLGL2Q6P1M3 1020 aa17.44■□□□□ 0.38
MRPS28-209ENST00000522987 TEX2Q8IWB9 1127 aa17.44■□□□□ 0.38
MRPS28-209ENST00000522987 SMAP1Q8IYB5 467 aaPredicted RBP17.44■□□□□ 0.38
MRPS28-209ENST00000522987 VN1R2Q8NFZ6 395 aa17.44■□□□□ 0.38
MRPS28-209ENST00000522987 MAP7D2Q96T17 732 aa17.44■□□□□ 0.38
MRPS28-209ENST00000522987 UNC45AQ9H3U1 944 aa17.44■□□□□ 0.38
MRPS28-209ENST00000522987 CWH43Q9H720 699 aa17.44■□□□□ 0.38
MRPS28-209ENST00000522987 TLR9Q9NR96 1032 aa17.44■□□□□ 0.38
MRPS28-209ENST00000522987 AAASQ9NRG9 546 aa17.44■□□□□ 0.38
MRPS28-209ENST00000522987 DISC1Q9NRI5 854 aa17.44■□□□□ 0.38
MRPS28-209ENST00000522987 USP15Q9Y4E8 981 aaPredicted RBP17.44■□□□□ 0.38
MRPS28-209ENST00000522987 TRIOO75962 3097 aa17.44■□□□□ 0.38
MRPS28-209ENST00000522987 ZNF318Q5VUA4 2279 aa17.44■□□□□ 0.38
MRPS28-209ENST00000522987 NID2Q14112 1375 aa17.43■□□□□ 0.38
MRPS28-209ENST00000522987 MYO10Q9HD67 2058 aa17.43■□□□□ 0.38
MRPS28-209ENST00000522987 WDR64B1ANS9 1081 aa17.43■□□□□ 0.38
MRPS28-209ENST00000522987 GAS7O60861 476 aa17.43■□□□□ 0.38
MRPS28-209ENST00000522987 OATP04181 439 aa17.43■□□□□ 0.38
MRPS28-209ENST00000522987 SP100P23497 879 aaPredicted RBP17.43■□□□□ 0.38
MRPS28-209ENST00000522987 PDIA3P30101 505 aaKnown RBP17.43■□□□□ 0.38
MRPS28-209ENST00000522987 STK3Q13188 491 aa17.43■□□□□ 0.38
MRPS28-209ENST00000522987 ODR4Q5SWX8 454 aa17.43■□□□□ 0.38
MRPS28-209ENST00000522987 LRRC55Q6ZSA7 311 aa17.43■□□□□ 0.38
MRPS28-209ENST00000522987 HFE2Q6ZVN8 426 aa17.43■□□□□ 0.38
MRPS28-209ENST00000522987 AIFM3Q96NN9 605 aa17.43■□□□□ 0.38
MRPS28-209ENST00000522987 POP1Q99575 1024 aaKnown RBP17.43■□□□□ 0.38
MRPS28-209ENST00000522987 UPF3BQ9BZI7 483 aaKnown RBP17.43■□□□□ 0.38
MRPS28-209ENST00000522987 ADAMTS10Q9H324 1103 aa17.43■□□□□ 0.38
MRPS28-209ENST00000522987 RNF19AQ9NV58 838 aa17.43■□□□□ 0.38
MRPS28-209ENST00000522987 TMEM161AQ9NX61 479 aa17.43■□□□□ 0.38
MRPS28-209ENST00000522987 TDP2O95551 362 aa17.42■□□□□ 0.38
MRPS28-209ENST00000522987 CIITAP33076 1130 aa17.42■□□□□ 0.38
MRPS28-209ENST00000522987 DRP2Q13474 957 aa17.42■□□□□ 0.38
MRPS28-209ENST00000522987 LONRF3Q496Y0 759 aa17.42■□□□□ 0.38
MRPS28-209ENST00000522987 MTERF2Q49AM1 385 aa17.42■□□□□ 0.38
MRPS28-209ENST00000522987 LRCH2Q5VUJ6 765 aa17.42■□□□□ 0.38
MRPS28-209ENST00000522987 ALYREFQ86V81 257 aaKnown RBP17.42■□□□□ 0.38
MRPS28-209ENST00000522987 SMRP1Q8NCR6 262 aa17.42■□□□□ 0.38
MRPS28-209ENST00000522987 CCDC148Q8NFR7 591 aa17.42■□□□□ 0.38
MRPS28-209ENST00000522987 BICD2Q8TD16 824 aa17.42■□□□□ 0.38
MRPS28-209ENST00000522987 TBCKQ8TEA7 893 aa17.42■□□□□ 0.38
MRPS28-209ENST00000522987 RPGRIP1Q96KN7 1286 aa17.42■□□□□ 0.38
MRPS28-209ENST00000522987 FAM167AQ96KS9 214 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms