RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 DENND3A2RUS2 1198 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 CARNS1A5YM72 827 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 GOLGA8AA7E2F4 631 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 GOLGA8BA8MQT2 603 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 BACH1O14867 736 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 LAG3P18627 525 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 GNA11P29992 359 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 ZNF76P36508 570 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 NRIP1P48552 1158 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 NHLH1Q02575 133 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 DUSP6Q16828 381 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 SWSAP1Q6NVH7 229 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 ADGRD2Q7Z7M1 963 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 FAM228AQ86W67 206 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 RAB11FIP4Q86YS3 637 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 RASEFQ8IZ41 740 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 FAM177A1Q8N128 213 aaPredicted RBP10.66□□□□□ -0.7
SDC2-207ENST00000522911 REXO1Q8N1G1 1221 aaKnown RBP10.66□□□□□ -0.7
SDC2-207ENST00000522911 BICD2Q8TD16 824 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 LENG9Q96B70 501 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 FBXL18Q96ME1 805 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 TRAIPQ9BWF2 469 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 TMEM117Q9H0C3 514 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 CWH43Q9H720 699 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 NGRNQ9NPE2 291 aaKnown RBP10.66□□□□□ -0.7
SDC2-207ENST00000522911 TECTAO75443 2155 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 MYO15AQ9UKN7 3530 aa10.66□□□□□ -0.7
SDC2-207ENST00000522911 DMDP11532 3685 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 KLF18A0A0U1RQI7 1052 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 PRPF3O43395 683 aaKnown RBP10.65□□□□□ -0.7
SDC2-207ENST00000522911 FGF18O76093 207 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 PSAPP07602 524 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 HOXB8P17481 243 aaPredicted RBP10.65□□□□□ -0.7
SDC2-207ENST00000522911 EIF4BP23588 611 aaKnown RBP10.65□□□□□ -0.7
SDC2-207ENST00000522911 ADD1P35611 737 aaKnown RBP10.65□□□□□ -0.7
SDC2-207ENST00000522911 PPM1AP35813 382 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 EVCP57679 992 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 CDC42EP1Q00587 391 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 NFX1Q12986 1120 aaKnown RBP10.65□□□□□ -0.7
SDC2-207ENST00000522911 TMEM266Q2M3C6 531 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 ADCK5Q3MIX3 580 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 PAN2Q504Q3 1202 aaKnown RBP10.65□□□□□ -0.7
SDC2-207ENST00000522911 TRIM67Q6ZTA4 783 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 COLGALT1Q8NBJ5 622 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 RDM1Q8NG50 284 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 PGBD1Q96JS3 809 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 RIT2Q99578 217 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 ZNF577Q9BSK1 485 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 IGFLR1Q9H665 355 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 TLE6Q9H808 572 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 ATP6V0A4Q9HBG4 840 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 C6orf50Q9HD87 102 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 TYW1Q9NV66 732 aaKnown RBP10.65□□□□□ -0.7
SDC2-207ENST00000522911 TMEM260Q9NX78 707 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 MUTYHQ9UIF7 546 aa10.65□□□□□ -0.7
SDC2-207ENST00000522911 USP15Q9Y4E8 981 aaPredicted RBP10.65□□□□□ -0.7
SDC2-207ENST00000522911 FNDC1Q4ZHG4 1894 aaPredicted RBP10.65□□□□□ -0.7
SDC2-207ENST00000522911 TBKBP1A7MCY6 615 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 WDR64B1ANS9 1081 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 EPB41L2O43491 1005 aaKnown RBP10.64□□□□□ -0.71
SDC2-207ENST00000522911 EOMESO95936 686 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 SRGAP2BP0DMP2 458 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 TMOD1P28289 359 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 GATMP50440 423 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 METAP2P50579 478 aaKnown RBP eCLIP10.64□□□□□ -0.71
SDC2-207ENST00000522911 USP11P51784 963 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 NUBP1P53384 320 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 ZXDAP98168 799 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 CLUL1Q15846 466 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 NTRK3Q16288 839 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 KIZQ2M2Z5 673 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 FAM102BQ5T8I3 360 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 CENPQQ7L2Z9 268 aaPredicted RBP10.64□□□□□ -0.71
SDC2-207ENST00000522911 MRPS27Q92552 414 aaKnown RBP10.64□□□□□ -0.71
SDC2-207ENST00000522911 CASD1Q96PB1 797 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 UIMC1Q96RL1 719 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 MAP7D2Q96T17 732 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 RNF26Q9BY78 433 aaPredicted RBP10.64□□□□□ -0.71
SDC2-207ENST00000522911 S1PR5Q9H228 398 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 ADAMTS10Q9H324 1103 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 SH3GLB2Q9NR46 395 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 RNF19AQ9NV58 838 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 TCEAL9Q9UHQ7 104 aa10.64□□□□□ -0.71
SDC2-207ENST00000522911 PUF60Q9UHX1 559 aaKnown RBP10.64□□□□□ -0.71
SDC2-207ENST00000522911 A0A0U1RQF3 1178 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 ZNF862O60290 1169 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 IFNAR1P17181 557 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 SFNP31947 248 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 MRE11P49959 708 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 ERVFC1P60507 584 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 SIGLEC14Q08ET2 396 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 TARBP2Q15633 366 aaKnown RBP10.63□□□□□ -0.71
SDC2-207ENST00000522911 JAKMIP3Q5VZ66 844 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 KCNT2Q6UVM3 1135 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 B3GNT9Q6UX72 402 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 ZNF598Q86UK7 904 aaKnown RBP10.63□□□□□ -0.71
SDC2-207ENST00000522911 LRRC43Q8N309 656 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 CCDC148Q8NFR7 591 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 VN1R2Q8NFZ6 395 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 OSMRQ99650 979 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms