RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 FILIP1LQ4L180 1135 aa17.05■□□□□ 0.32
CTNNA1-236ENST00000522792 FAM160B1Q5W0V3 765 aa17.05■□□□□ 0.32
CTNNA1-236ENST00000522792 LRRC55Q6ZSA7 311 aa17.05■□□□□ 0.32
CTNNA1-236ENST00000522792 TRIM50Q86XT4 487 aa17.05■□□□□ 0.32
CTNNA1-236ENST00000522792 IKZF4Q9H2S9 585 aa17.05■□□□□ 0.32
CTNNA1-236ENST00000522792 RTN4Q9NQC3 1192 aaKnown RBP17.05■□□□□ 0.32
CTNNA1-236ENST00000522792 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 K7ENM7 598 aa17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 NKRFO15226 690 aaKnown RBP eCLIP17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 MARK3P27448 753 aa17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 BMT2Q1RMZ1 405 aa17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 ZNF720Q7Z2F6 126 aa17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 FAM114A1Q8IWE2 563 aa17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 ZNF507Q8TCN5 953 aa17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 DRC1Q96MC2 740 aa17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 KCNF1Q9H3M0 494 aa17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 AZI2Q9H6S1 392 aa17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 SLC5A4Q9NY91 659 aa17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 LARSQ9P2J5 1176 aaKnown RBP17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 ZHX1Q9UKY1 873 aaPredicted RBP17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 MYH9P35579 1960 aaKnown RBP17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 MYH11P35749 1972 aa17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 PLS3P13797 630 aa17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 MTIF2P46199 727 aaKnown RBP17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 GLG1Q92896 1179 aa17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 TIPINQ9BVW5 301 aa17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.04■□□□□ 0.32
CTNNA1-236ENST00000522792 LRRC10BA6NIK2 292 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 PES1O00541 588 aaKnown RBP17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 EIF3DO15371 548 aaKnown RBP eCLIP17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 CA12O43570 354 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 FGFR1OPO95684 399 aaKnown RBP17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 PEX3P56589 373 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 FKBP3Q00688 224 aaKnown RBP17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 ARHGAP1Q07960 439 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 LRMPQ12912 555 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 AFAP1L1Q8TED9 768 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 TUBGCP2Q9BSJ2 902 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 FLRT1Q9NZU1 646 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 IMPACTQ9P2X3 320 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 ZMYM2Q9UBW7 1377 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 RBM47A0AV96 593 aaKnown RBP17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 TNPO2O14787 897 aaKnown RBP17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 DGAT1O75907 488 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 CYP2B6P20813 491 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 ACVR2BQ13705 512 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 FOXR2Q6PJQ5 311 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 ATP6V0A4Q9HBG4 840 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 XPNPEP1Q9NQW7 623 aa17.03■□□□□ 0.32
CTNNA1-236ENST00000522792 LGR5O75473 907 aa17.02■□□□□ 0.32
CTNNA1-236ENST00000522792 GH1P01241 217 aa17.02■□□□□ 0.32
CTNNA1-236ENST00000522792 CTGFP29279 349 aa17.02■□□□□ 0.32
CTNNA1-236ENST00000522792 POLGP54098 1239 aaPredicted RBP17.02■□□□□ 0.32
CTNNA1-236ENST00000522792 CCL14Q16627 93 aa17.02■□□□□ 0.32
CTNNA1-236ENST00000522792 PRAMEF19Q5SWL8 479 aa17.02■□□□□ 0.32
CTNNA1-236ENST00000522792 STXBP4Q6ZWJ1 553 aa17.02■□□□□ 0.32
CTNNA1-236ENST00000522792 ZSCAN30Q86W11 494 aa17.02■□□□□ 0.32
CTNNA1-236ENST00000522792 CACTINQ8WUQ7 758 aaKnown RBP17.02■□□□□ 0.32
CTNNA1-236ENST00000522792 BSNDQ8WZ55 320 aa17.02■□□□□ 0.32
CTNNA1-236ENST00000522792 CAPNS2Q96L46 248 aa17.02■□□□□ 0.32
CTNNA1-236ENST00000522792 TYW1Q9NV66 732 aaKnown RBP17.02■□□□□ 0.32
CTNNA1-236ENST00000522792 ZKSCAN5Q9Y2L8 839 aa17.02■□□□□ 0.32
CTNNA1-236ENST00000522792 ESPNB1AK53 854 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 SLC16A4O15374 487 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 CALUO43852 315 aaPredicted RBP17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 NR2F2P24468 414 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 UBXN1Q04323 297 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 NOGQ13253 232 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 EMC2Q15006 297 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 DEFB115Q30KQ5 88 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 SPECC1LQ69YQ0 1117 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 KIFC3Q9BVG8 833 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 NIFKQ9BYG3 293 aaKnown RBP17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 ABHD16BQ9H3Z7 469 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 PDLIM7Q9NR12 457 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 NRBP2Q9NSY0 501 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 TRAF3IP3Q9Y228 551 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 PCDHB13Q9Y5F0 798 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 DOCK3Q8IZD9 2030 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 UBE4BO95155 1302 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 CCDC169A6NNP5 214 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 LGALS16A8MUM7 142 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 PDXKO00764 312 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 CLIC2O15247 247 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 TGFB1I1O43294 461 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 CAPN15O75808 1086 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 PPP1R37O75864 691 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 SMPD1P17405 629 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 GOLGA8FQ08AF8 430 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 GOLGA8DPQ0D2H9 430 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 ADAM9Q13443 819 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 LAMC2Q13753 1193 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 EDRF1Q3B7T1 1238 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 CCDC40Q4G0X9 1142 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 MCPH1Q8NEM0 835 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 USP6NLQ92738 828 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 KIFAP3Q92845 792 aa17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 NOC4LQ9BVI4 516 aaKnown RBP17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 POLR3FQ9H1D9 316 aaPredicted RBP17.01■□□□□ 0.31
CTNNA1-236ENST00000522792 EMSYQ7Z589 1322 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms