RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 PDLIM7Q9NR12 457 aa18.09■□□□□ 0.49
LSM1-204ENST00000522515 PPME1Q9Y570 386 aa18.09■□□□□ 0.49
LSM1-204ENST00000522515 DNAH12Q6ZR08 3092 aa18.09■□□□□ 0.49
LSM1-204ENST00000522515 NPHP3-ACAD11A0A0J9YXS1 232 aa18.08■□□□□ 0.49
LSM1-204ENST00000522515 DGAT1O75907 488 aa18.08■□□□□ 0.49
LSM1-204ENST00000522515 GDF6Q6KF10 455 aaPredicted RBP18.08■□□□□ 0.49
LSM1-204ENST00000522515 MTHFD1LQ6UB35 978 aa18.08■□□□□ 0.49
LSM1-204ENST00000522515 MAEAQ7L5Y9 396 aa18.08■□□□□ 0.49
LSM1-204ENST00000522515 SLC7A3Q8WY07 619 aa18.08■□□□□ 0.49
LSM1-204ENST00000522515 POLD4Q9HCU8 107 aa18.08■□□□□ 0.49
LSM1-204ENST00000522515 XPNPEP1Q9NQW7 623 aa18.08■□□□□ 0.49
LSM1-204ENST00000522515 KAT6AQ92794 2004 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 IGKV6-21A0A0C4DH24 114 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 ARVCFO00192 962 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 TREHO43280 583 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 PRR29P0C7W0 189 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 RFC5P40937 340 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 SOX10P56693 466 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 MDM2Q00987 491 aaPredicted RBP18.08■□□□□ 0.48
LSM1-204ENST00000522515 CUL4BQ13620 913 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 EMC2Q15006 297 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 KANK3Q6NY19 840 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 DYMQ7RTS9 669 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 DDX12PQ92771 950 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 TRIM9Q9C026 710 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 BLZF1Q9H2G9 400 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 KCND2Q9NZV8 630 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 TUBE1Q9UJT0 475 aa18.08■□□□□ 0.48
LSM1-204ENST00000522515 MBLAC1A4D2B0 266 aaPredicted RBP18.07■□□□□ 0.48
LSM1-204ENST00000522515 GNAT1P11488 350 aa18.07■□□□□ 0.48
LSM1-204ENST00000522515 CDK7P50613 346 aa18.07■□□□□ 0.48
LSM1-204ENST00000522515 ATN1P54259 1190 aaPredicted RBP18.07■□□□□ 0.48
LSM1-204ENST00000522515 AMPD3Q01432 767 aa18.07■□□□□ 0.48
LSM1-204ENST00000522515 CACNB1Q02641 598 aaPredicted RBP18.07■□□□□ 0.48
LSM1-204ENST00000522515 PTPN11Q06124 597 aaPredicted RBP18.07■□□□□ 0.48
LSM1-204ENST00000522515 CAMK4Q16566 473 aa18.07■□□□□ 0.48
LSM1-204ENST00000522515 SLC39A5Q6ZMH5 540 aa18.07■□□□□ 0.48
LSM1-204ENST00000522515 LRRC71Q8N4P6 559 aa18.07■□□□□ 0.48
LSM1-204ENST00000522515 REEP2Q9BRK0 252 aa18.07■□□□□ 0.48
LSM1-204ENST00000522515 C11orf49Q9H6J7 331 aa18.07■□□□□ 0.48
LSM1-204ENST00000522515 ATP6V0A4Q9HBG4 840 aa18.07■□□□□ 0.48
LSM1-204ENST00000522515 MAGEB2O15479 319 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 KRT18P05783 430 aaKnown RBP18.06■□□□□ 0.48
LSM1-204ENST00000522515 GUCY2CP25092 1073 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 MKRN4PQ13434 485 aaPredicted RBP18.06■□□□□ 0.48
LSM1-204ENST00000522515 DRP2Q13474 957 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 PNOCQ13519 176 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 GIT2Q14161 759 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 POSTNQ15063 836 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 KLHL40Q2TBA0 621 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 EFCAB12Q6NXP0 572 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 NECAB2Q7Z6G3 386 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 EXOC8Q8IYI6 725 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 METTL13Q8N6R0 699 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 TMEM143Q96AN5 459 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 DNAJC19Q96DA6 116 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 CTAGE1Q96RT6 745 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 C7orf25Q9BPX7 421 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 LRRC27Q9C0I9 530 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 CLSTN2Q9H4D0 955 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 SUGCTQ9HAC7 445 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 GPRC5CQ9NQ84 441 aa18.06■□□□□ 0.48
LSM1-204ENST00000522515 TRMT13Q9NUP7 481 aaKnown RBP18.06■□□□□ 0.48
LSM1-204ENST00000522515 TRIP12Q14669 1992 aaPredicted RBP18.06■□□□□ 0.48
LSM1-204ENST00000522515 GTPBP6O43824 516 aaPredicted RBP18.05■□□□□ 0.48
LSM1-204ENST00000522515 HIP1RO75146 1068 aa18.05■□□□□ 0.48
LSM1-204ENST00000522515 CLCN3P51790 818 aa18.05■□□□□ 0.48
LSM1-204ENST00000522515 MAPK7Q13164 816 aa18.05■□□□□ 0.48
LSM1-204ENST00000522515 PTGISQ16647 500 aa18.05■□□□□ 0.48
LSM1-204ENST00000522515 FAM102BQ5T8I3 360 aa18.05■□□□□ 0.48
LSM1-204ENST00000522515 RUFY4Q6ZNE9 571 aa18.05■□□□□ 0.48
LSM1-204ENST00000522515 UBE2Q1Q7Z7E8 422 aa18.05■□□□□ 0.48
LSM1-204ENST00000522515 ELOA2Q8IYF1 753 aaPredicted RBP18.05■□□□□ 0.48
LSM1-204ENST00000522515 DAW1Q8N136 415 aa18.05■□□□□ 0.48
LSM1-204ENST00000522515 LINC01465Q8N7H1 131 aa18.05■□□□□ 0.48
LSM1-204ENST00000522515 RETREG2Q8NC44 543 aa18.05■□□□□ 0.48
LSM1-204ENST00000522515 MCPH1Q8NEM0 835 aa18.05■□□□□ 0.48
LSM1-204ENST00000522515 ERCC4Q92889 916 aaPredicted RBP18.05■□□□□ 0.48
LSM1-204ENST00000522515 CCDC34Q96HJ3 373 aa18.05■□□□□ 0.48
LSM1-204ENST00000522515 JPH2Q9BR39 696 aaPredicted RBP18.05■□□□□ 0.48
LSM1-204ENST00000522515 PCDHA2Q9Y5H9 948 aa18.05■□□□□ 0.48
LSM1-204ENST00000522515 RSPH10B2B2RC85 870 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 TRAK2O60296 914 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 B4GALT4O60513 344 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 RSPH10BP0C881 870 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 CYP2C9P11712 490 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 DPYDQ12882 1025 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 CNNM4Q6P4Q7 775 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 TNS4Q8IZW8 715 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 SEZ6LQ9BYH1 1024 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 TRPV6Q9H1D0 765 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 NUP62CLQ9H1M0 184 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 TMEM63CQ9P1W3 806 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 EVPLQ92817 2033 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 SFI1A8K8P3 1242 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 MYL1P05976 194 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 ASIC1P78348 528 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 SNX17Q15036 470 aa18.04■□□□□ 0.48
LSM1-204ENST00000522515 SKOR2Q2VWA4 1001 aaPredicted RBP18.04■□□□□ 0.48
LSM1-204ENST00000522515 KIAA0319LQ8IZA0 1049 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms