RNA–Protein interactions for RNA: ENST00000522246.5

CD74-208, Transcript of CD74 molecule, human

TSL 4

Gene CD74, Length 563 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD74-208	ENST00000522246	TRPV1	Q8NER1	839 aa		11.74	□□□□□ -0.53
CD74-208	ENST00000522246	ENOX1	Q8TC92	643 aa	Known RBP	11.74	□□□□□ -0.53
CD74-208	ENST00000522246	TCP11	Q8WWU5	503 aa		11.74	□□□□□ -0.53
CD74-208	ENST00000522246	C16orf70	Q9BSU1	422 aa		11.74	□□□□□ -0.53
CD74-208	ENST00000522246	KATNAL1	Q9BW62	490 aa		11.74	□□□□□ -0.53
CD74-208	ENST00000522246	UPF3A	Q9H1J1	476 aa	Known RBP	11.74	□□□□□ -0.53
CD74-208	ENST00000522246	RBSN	Q9H1K0	784 aa		11.74	□□□□□ -0.53
CD74-208	ENST00000522246	ZHX3	Q9H4I2	956 aa		11.74	□□□□□ -0.53
CD74-208	ENST00000522246	DHX33	Q9H6R0	707 aa	Known RBP	11.74	□□□□□ -0.53
CD74-208	ENST00000522246	CBX8	Q9HC52	389 aa		11.74	□□□□□ -0.53
CD74-208	ENST00000522246	RWDD2A	Q9UIY3	292 aa		11.74	□□□□□ -0.53
CD74-208	ENST00000522246	TRPC6	Q9Y210	931 aa		11.74	□□□□□ -0.53
CD74-208	ENST00000522246	TELO2	Q9Y4R8	837 aa		11.74	□□□□□ -0.53
CD74-208	ENST00000522246	TRIM17	Q9Y577	477 aa		11.74	□□□□□ -0.53
CD74-208	ENST00000522246	PCDHB13	Q9Y5F0	798 aa		11.74	□□□□□ -0.53
CD74-208	ENST00000522246	COL1A2	P08123	1366 aa		11.74	□□□□□ -0.53
CD74-208	ENST00000522246	KAT6A	Q92794	2004 aa		11.74	□□□□□ -0.53
CD74-208	ENST00000522246	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	ASAP2	O43150	1006 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	USO1	O60763	962 aa	Known RBP	11.73	□□□□□ -0.53
CD74-208	ENST00000522246	HIP1R	O75146	1068 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	MAF	O75444	373 aa	Predicted RBP	11.73	□□□□□ -0.53
CD74-208	ENST00000522246	PLS3	P13797	630 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	ELN	P15502	786 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	PRCP	P42785	496 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	DNM2	P50570	870 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	CAP1	Q01518	475 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	RAD51AP2	Q09MP3	1159 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	TBC1D8B	Q0IIM8	1120 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	STK4	Q13043	487 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	IQCB1	Q15051	598 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	PPP2R5A	Q15172	486 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	FSCN1	Q16658	493 aa	Known RBP	11.73	□□□□□ -0.53
CD74-208	ENST00000522246	FAM102B	Q5T8I3	360 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	IER5	Q5VY09	327 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	PLA2G4F	Q68DD2	849 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.73	□□□□□ -0.53
CD74-208	ENST00000522246	MYOCD	Q8IZQ8	938 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	RETREG2	Q8NC44	543 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	SPIRE2	Q8WWL2	714 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	IFT74	Q96LB3	600 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	NTPCR	Q9BSD7	190 aa	Known RBP	11.73	□□□□□ -0.53
CD74-208	ENST00000522246	MRPL44	Q9H9J2	332 aa	Known RBP	11.73	□□□□□ -0.53
CD74-208	ENST00000522246	GRPEL1	Q9HAV7	217 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	SLC39A2	Q9NP94	309 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	PCDHA2	Q9Y5H9	948 aa		11.73	□□□□□ -0.53
CD74-208	ENST00000522246	MYH11	P35749	1972 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	UBE4B	O95155	1302 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	EIF3D	O15371	548 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
CD74-208	ENST00000522246	FGFR1OP	O95684	399 aa	Known RBP	11.72	□□□□□ -0.53
CD74-208	ENST00000522246	GNAT1	P11488	350 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	CCNE1	P24864	410 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	TMOD1	P28289	359 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	CDC42EP1	Q00587	391 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	MYL5	Q02045	173 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	PAK1	Q13153	545 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	EMC2	Q15006	297 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	GNAS	Q5JWF2	1037 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	ODR4	Q5SWX8	454 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	ZNF720	Q7Z2F6	126 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.72	□□□□□ -0.53
CD74-208	ENST00000522246	FAM178B	Q8IXR5	827 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	PCSK9	Q8NBP7	692 aa	Known RBP	11.72	□□□□□ -0.53
CD74-208	ENST00000522246	ZNF507	Q8TCN5	953 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	NOC3L	Q8WTT2	800 aa	Known RBP	11.72	□□□□□ -0.53
CD74-208	ENST00000522246	ANP32B	Q92688	251 aa	Known RBP	11.72	□□□□□ -0.53
CD74-208	ENST00000522246	TSG101	Q99816	390 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	ST6GALNAC4	Q9H4F1	302 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	HMX1	Q9NP08	348 aa	Predicted RBP	11.72	□□□□□ -0.53
CD74-208	ENST00000522246	PTPN22	Q9Y2R2	807 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	GDA	Q9Y2T3	454 aa		11.72	□□□□□ -0.53
CD74-208	ENST00000522246	PHLPP2	Q6ZVD8	1323 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	NRCAM	Q92823	1304 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	IGKV6-21	A0A0C4DH24	114 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	ADCY6	O43306	1168 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	CABYR	O75952	493 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	F2	P00734	622 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	MYL3	P08590	195 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	C6orf222	P0C671	652 aa	Predicted RBP	11.71	□□□□□ -0.53
CD74-208	ENST00000522246	INSRR	P14616	1297 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	MARK3	P27448	753 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	CST5	P28325	142 aa	Predicted RBP	11.71	□□□□□ -0.53
CD74-208	ENST00000522246	SNRPF	P62306	86 aa	Known RBP	11.71	□□□□□ -0.53
CD74-208	ENST00000522246	CACNB1	Q02641	598 aa	Predicted RBP	11.71	□□□□□ -0.53
CD74-208	ENST00000522246	DMP1	Q13316	513 aa	Predicted RBP	11.71	□□□□□ -0.53
CD74-208	ENST00000522246	MXD4	Q14582	209 aa	Predicted RBP	11.71	□□□□□ -0.53
CD74-208	ENST00000522246	TPD52L1	Q16890	204 aa	Predicted RBP	11.71	□□□□□ -0.53
CD74-208	ENST00000522246	BMT2	Q1RMZ1	405 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	SPATA1	Q5VX52	437 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	CENPP	Q6IPU0	288 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	KLHL10	Q6JEL2	608 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	PPP4R3CP	Q6ZMV5	832 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	RNF180	Q86T96	592 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	SFR1	Q86XK3	245 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	ZNF710	Q8N1W2	664 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	KIAA0895	Q8NCT3	520 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	RNF214	Q8ND24	703 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	NELFB	Q8WX92	580 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	KCNN1	Q92952	543 aa		11.71	□□□□□ -0.53
CD74-208	ENST00000522246	P2RX5	Q93086	422 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 67 ms