RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 TNMDQ9H2S6 317 aa26.87■■□□□ 1.89
PVT1-212ENST00000521951 C11orf49Q9H6J7 331 aa26.87■■□□□ 1.89
PVT1-212ENST00000521951 PDLIM7Q9NR12 457 aa26.87■■□□□ 1.89
PVT1-212ENST00000521951 DGAT1O75907 488 aa26.86■■□□□ 1.89
PVT1-212ENST00000521951 MBD3O95983 291 aa26.86■■□□□ 1.89
PVT1-212ENST00000521951 AFMP43652 599 aa26.86■■□□□ 1.89
PVT1-212ENST00000521951 CDK7P50613 346 aa26.86■■□□□ 1.89
PVT1-212ENST00000521951 POLGP54098 1239 aaPredicted RBP26.86■■□□□ 1.89
PVT1-212ENST00000521951 SLC39A5Q6ZMH5 540 aa26.86■■□□□ 1.89
PVT1-212ENST00000521951 NECAB2Q7Z6G3 386 aa26.86■■□□□ 1.89
PVT1-212ENST00000521951 SH3RF1Q7Z6J0 888 aa26.86■■□□□ 1.89
PVT1-212ENST00000521951 GRAMD1CQ8IYS0 662 aa26.86■■□□□ 1.89
PVT1-212ENST00000521951 TNS4Q8IZW8 715 aa26.86■■□□□ 1.89
PVT1-212ENST00000521951 BMP2KQ9NSY1 1161 aaPredicted RBP26.86■■□□□ 1.89
PVT1-212ENST00000521951 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.85■■□□□ 1.89
PVT1-212ENST00000521951 MBLAC1A4D2B0 266 aaPredicted RBP26.85■■□□□ 1.89
PVT1-212ENST00000521951 MYMKA6NI61 221 aa26.85■■□□□ 1.89
PVT1-212ENST00000521951 MAGEB2O15479 319 aa26.85■■□□□ 1.89
PVT1-212ENST00000521951 TREHO43280 583 aa26.85■■□□□ 1.89
PVT1-212ENST00000521951 XPNPEP1Q9NQW7 623 aa26.85■■□□□ 1.89
PVT1-212ENST00000521951 TUBE1Q9UJT0 475 aa26.85■■□□□ 1.89
PVT1-212ENST00000521951 IGKV6-21A0A0C4DH24 114 aa26.85■■□□□ 1.89
PVT1-212ENST00000521951 ATN1P54259 1190 aaPredicted RBP26.85■■□□□ 1.89
PVT1-212ENST00000521951 AMPD3Q01432 767 aa26.85■■□□□ 1.89
PVT1-212ENST00000521951 EMC2Q15006 297 aa26.85■■□□□ 1.89
PVT1-212ENST00000521951 KANK3Q6NY19 840 aa26.85■■□□□ 1.89
PVT1-212ENST00000521951 EXOC8Q8IYI6 725 aa26.85■■□□□ 1.89
PVT1-212ENST00000521951 SLC7A3Q8WY07 619 aa26.85■■□□□ 1.89
PVT1-212ENST00000521951 LRRC27Q9C0I9 530 aa26.85■■□□□ 1.89
PVT1-212ENST00000521951 ATP6V0A4Q9HBG4 840 aa26.85■■□□□ 1.89
PVT1-212ENST00000521951 KCND2Q9NZV8 630 aa26.85■■□□□ 1.89
PVT1-212ENST00000521951 NPHP3-ACAD11A0A0J9YXS1 232 aa26.84■■□□□ 1.89
PVT1-212ENST00000521951 EFCAB12Q6NXP0 572 aa26.84■■□□□ 1.89
PVT1-212ENST00000521951 UBE2Q1Q7Z7E8 422 aa26.84■■□□□ 1.89
PVT1-212ENST00000521951 PCDHA2Q9Y5H9 948 aa26.84■■□□□ 1.89
PVT1-212ENST00000521951 GUCY2CP25092 1073 aa26.83■■□□□ 1.89
PVT1-212ENST00000521951 RAD51AP2Q09MP3 1159 aa26.83■■□□□ 1.89
PVT1-212ENST00000521951 MAEAQ7L5Y9 396 aa26.83■■□□□ 1.89
PVT1-212ENST00000521951 DYMQ7RTS9 669 aa26.83■■□□□ 1.89
PVT1-212ENST00000521951 LRRC71Q8N4P6 559 aa26.83■■□□□ 1.89
PVT1-212ENST00000521951 RETREG2Q8NC44 543 aa26.83■■□□□ 1.89
PVT1-212ENST00000521951 DDX12PQ92771 950 aa26.83■■□□□ 1.89
PVT1-212ENST00000521951 C7orf25Q9BPX7 421 aa26.83■■□□□ 1.89
PVT1-212ENST00000521951 JPH2Q9BR39 696 aaPredicted RBP26.83■■□□□ 1.89
PVT1-212ENST00000521951 SUGCTQ9HAC7 445 aa26.83■■□□□ 1.89
PVT1-212ENST00000521951 POLD4Q9HCU8 107 aa26.83■■□□□ 1.89
PVT1-212ENST00000521951 TRMT13Q9NUP7 481 aaKnown RBP26.83■■□□□ 1.89
PVT1-212ENST00000521951 CCDC85CA6NKD9 419 aa26.82■■□□□ 1.88
PVT1-212ENST00000521951 CASP1P29466 404 aa26.82■■□□□ 1.88
PVT1-212ENST00000521951 SOX10P56693 466 aa26.82■■□□□ 1.88
PVT1-212ENST00000521951 MDM2Q00987 491 aaPredicted RBP26.82■■□□□ 1.88
PVT1-212ENST00000521951 MKRN4PQ13434 485 aaPredicted RBP26.82■■□□□ 1.88
PVT1-212ENST00000521951 SNX17Q15036 470 aa26.82■■□□□ 1.88
PVT1-212ENST00000521951 PTGISQ16647 500 aa26.82■■□□□ 1.88
PVT1-212ENST00000521951 METTL13Q8N6R0 699 aa26.82■■□□□ 1.88
PVT1-212ENST00000521951 LINC01465Q8N7H1 131 aa26.82■■□□□ 1.88
PVT1-212ENST00000521951 MCPH1Q8NEM0 835 aa26.82■■□□□ 1.88
PVT1-212ENST00000521951 CCDC34Q96HJ3 373 aa26.82■■□□□ 1.88
PVT1-212ENST00000521951 CTAGE1Q96RT6 745 aa26.82■■□□□ 1.88
PVT1-212ENST00000521951 TRIM9Q9C026 710 aa26.82■■□□□ 1.88
PVT1-212ENST00000521951 DNAH12Q6ZR08 3092 aa26.82■■□□□ 1.88
PVT1-212ENST00000521951 KRT18P05783 430 aaKnown RBP26.81■■□□□ 1.88
PVT1-212ENST00000521951 CYP2C9P11712 490 aa26.81■■□□□ 1.88
PVT1-212ENST00000521951 CUL4BQ13620 913 aa26.81■■□□□ 1.88
PVT1-212ENST00000521951 GIT2Q14161 759 aa26.81■■□□□ 1.88
PVT1-212ENST00000521951 C1orf53Q5VUE5 145 aa26.81■■□□□ 1.88
PVT1-212ENST00000521951 RUFY4Q6ZNE9 571 aa26.81■■□□□ 1.88
PVT1-212ENST00000521951 ELOA2Q8IYF1 753 aaPredicted RBP26.81■■□□□ 1.88
PVT1-212ENST00000521951 TMEM143Q96AN5 459 aa26.81■■□□□ 1.88
PVT1-212ENST00000521951 DNAJC19Q96DA6 116 aa26.81■■□□□ 1.88
PVT1-212ENST00000521951 TRPV6Q9H1D0 765 aa26.81■■□□□ 1.88
PVT1-212ENST00000521951 BLZF1Q9H2G9 400 aa26.81■■□□□ 1.88
PVT1-212ENST00000521951 GTPBP6O43824 516 aaPredicted RBP26.8■■□□□ 1.88
PVT1-212ENST00000521951 GAS2O43903 313 aaKnown RBP26.8■■□□□ 1.88
PVT1-212ENST00000521951 B4GALT4O60513 344 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 PRR29P0C7W0 189 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 CLCN3P51790 818 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 CACNB1Q02641 598 aaPredicted RBP26.8■■□□□ 1.88
PVT1-212ENST00000521951 DRP2Q13474 957 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 FAM102BQ5T8I3 360 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 CNNM4Q6P4Q7 775 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 REEP2Q9BRK0 252 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 TIPINQ9BVW5 301 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 GPRC5CQ9NQ84 441 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 MYH11P35749 1972 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 SMIM35A0A1B0GVV1 85 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 HIP1RO75146 1068 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 POSTNQ15063 836 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 IER5Q5VY09 327 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 SERINC5Q86VE9 423 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 FAM126BQ8IXS8 530 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 DAW1Q8N136 415 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 CLSTN2Q9H4D0 955 aa26.8■■□□□ 1.88
PVT1-212ENST00000521951 MROH7Q68CQ1 1323 aa26.79■■□□□ 1.88
PVT1-212ENST00000521951 RSPH10B2B2RC85 870 aa26.79■■□□□ 1.88
PVT1-212ENST00000521951 MYL1P05976 194 aa26.79■■□□□ 1.88
PVT1-212ENST00000521951 RSPH10BP0C881 870 aa26.79■■□□□ 1.88
PVT1-212ENST00000521951 TMOD1P28289 359 aa26.79■■□□□ 1.88
PVT1-212ENST00000521951 DNM2P50570 870 aa26.79■■□□□ 1.88
PVT1-212ENST00000521951 MAPK7Q13164 816 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms