RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 PCDHB6Q9Y5E3 794 aa10.58□□□□□ -0.72
CLK4-209ENST00000521621 GPR182O15218 404 aa10.58□□□□□ -0.72
CLK4-209ENST00000521621 ACRP10323 421 aa10.58□□□□□ -0.72
CLK4-209ENST00000521621 SCP2P22307 547 aa10.58□□□□□ -0.72
CLK4-209ENST00000521621 GPC3P51654 580 aa10.58□□□□□ -0.72
CLK4-209ENST00000521621 FAM189BP81408 668 aa10.58□□□□□ -0.72
CLK4-209ENST00000521621 DSC3Q14574 896 aa10.58□□□□□ -0.72
CLK4-209ENST00000521621 HERC6Q8IVU3 1022 aa10.58□□□□□ -0.72
CLK4-209ENST00000521621 BANK1Q8NDB2 785 aa10.58□□□□□ -0.72
CLK4-209ENST00000521621 GJA10Q969M2 543 aa10.58□□□□□ -0.72
CLK4-209ENST00000521621 SAMD11Q96NU1 681 aa10.58□□□□□ -0.72
CLK4-209ENST00000521621 INO80BQ9C086 356 aaPredicted RBP10.58□□□□□ -0.72
CLK4-209ENST00000521621 TSPYL2Q9H2G4 693 aaPredicted RBP10.58□□□□□ -0.72
CLK4-209ENST00000521621 KCND2Q9NZV8 630 aa10.58□□□□□ -0.72
CLK4-209ENST00000521621 PHLPP2Q6ZVD8 1323 aa10.58□□□□□ -0.72
CLK4-209ENST00000521621 DDX11L8A8MPP1 907 aa10.57□□□□□ -0.72
CLK4-209ENST00000521621 TCTN1Q2MV58 587 aa10.57□□□□□ -0.72
CLK4-209ENST00000521621 DTHD1Q6ZMT9 781 aa10.57□□□□□ -0.72
CLK4-209ENST00000521621 CATSPER3Q86XQ3 398 aa10.57□□□□□ -0.72
CLK4-209ENST00000521621 IFIH1Q9BYX4 1025 aaKnown RBP10.57□□□□□ -0.72
CLK4-209ENST00000521621 FTOQ9C0B1 505 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLK4-209ENST00000521621 SEPT9Q9UHD8 586 aaPredicted RBP10.57□□□□□ -0.72
CLK4-209ENST00000521621 STX6O43752 255 aa10.57□□□□□ -0.72
CLK4-209ENST00000521621 ATP2A2P16615 1042 aaKnown RBP10.57□□□□□ -0.72
CLK4-209ENST00000521621 LONP1P36776 959 aaKnown RBP10.57□□□□□ -0.72
CLK4-209ENST00000521621 KCNJ6P48051 423 aa10.57□□□□□ -0.72
CLK4-209ENST00000521621 MXD4Q14582 209 aaPredicted RBP10.57□□□□□ -0.72
CLK4-209ENST00000521621 SRGAP1Q7Z6B7 1085 aa10.57□□□□□ -0.72
CLK4-209ENST00000521621 TRAPPC12Q8WVT3 735 aa10.57□□□□□ -0.72
CLK4-209ENST00000521621 SLC7A3Q8WY07 619 aa10.57□□□□□ -0.72
CLK4-209ENST00000521621 TOP1MTQ969P6 601 aa10.57□□□□□ -0.72
CLK4-209ENST00000521621 RC3H2Q9HBD1 1191 aaKnown RBP10.57□□□□□ -0.72
CLK4-209ENST00000521621 RGS18Q9NS28 235 aa10.57□□□□□ -0.72
CLK4-209ENST00000521621 CXXC1Q9P0U4 656 aaPredicted RBP10.57□□□□□ -0.72
CLK4-209ENST00000521621 MSRAQ9UJ68 235 aa10.57□□□□□ -0.72
CLK4-209ENST00000521621 DARSP14868 501 aaKnown RBP10.56□□□□□ -0.72
CLK4-209ENST00000521621 ARL2P36404 184 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 NASPP49321 788 aaPredicted RBP10.56□□□□□ -0.72
CLK4-209ENST00000521621 RARRES1P49788 294 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 IGBP1P78318 339 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 IL17AQ16552 155 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 DEFB128Q7Z7B8 93 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 MCPH1Q8NEM0 835 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 DBF4BQ8NFT6 615 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 PPP1R13LQ8WUF5 828 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 NT5C3AQ9H0P0 336 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 LRWD1Q9UFC0 647 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 KCNG1Q9UIX4 513 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.56□□□□□ -0.72
CLK4-209ENST00000521621 CARNS1A5YM72 827 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 GJB5O95377 273 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 CHMP4BP1P59074 171 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 PTPAQ15257 358 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 RAD9AQ99638 391 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 RGL1Q9NZL6 768 aa10.56□□□□□ -0.72
CLK4-209ENST00000521621 ENPP3O14638 875 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 DTNBO60941 627 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 MED24O75448 989 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 EIF4BP23588 611 aaKnown RBP10.55□□□□□ -0.72
CLK4-209ENST00000521621 TECP42680 631 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 FOSBP53539 338 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 PAK2Q13177 524 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 OTOP2Q7RTS6 562 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 NPAS4Q8IUM7 802 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 ZNF689Q96CS4 500 aaPredicted RBP10.55□□□□□ -0.72
CLK4-209ENST00000521621 CCDC51Q96ER9 411 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 CEP170P1Q96L14 293 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 MTRQ99707 1265 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 PBX4Q9BYU1 374 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 ATP6V0A4Q9HBG4 840 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 EYA4O95677 639 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 AXLP30530 894 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 SARSP49591 514 aaKnown RBP10.55□□□□□ -0.72
CLK4-209ENST00000521621 EMC2Q15006 297 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 TMEM119Q4V9L6 283 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 MCTP1Q6DN14 999 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 TPH2Q8IWU9 490 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 TIFAQ96CG3 184 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 GCOM2Q9BZD3 368 aaPredicted RBP10.55□□□□□ -0.72
CLK4-209ENST00000521621 CCSER1Q9C0I3 900 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 C17orf75Q9HAS0 396 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 LMCD1Q9NZU5 365 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 SUCLA2Q9P2R7 463 aaPredicted RBP10.55□□□□□ -0.72
CLK4-209ENST00000521621 PADI3Q9ULW8 664 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 RWDD3Q9Y3V2 267 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 INSL6Q9Y581 213 aa10.55□□□□□ -0.72
CLK4-209ENST00000521621 POTEMA6NI47 508 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 SKIP12755 728 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 DNAJB2P25686 324 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 POLGP54098 1239 aaPredicted RBP10.54□□□□□ -0.72
CLK4-209ENST00000521621 CTTNQ14247 550 aaKnown RBP10.54□□□□□ -0.72
CLK4-209ENST00000521621 FAM187BQ17R55 369 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 MTERF2Q49AM1 385 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 ZNF697Q5TEC3 545 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 KRT79Q5XKE5 535 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 FERMT3Q86UX7 667 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 PSPC1Q8WXF1 523 aaKnown RBP10.54□□□□□ -0.72
CLK4-209ENST00000521621 MMTAG2Q9BU76 263 aaKnown RBP10.54□□□□□ -0.72
CLK4-209ENST00000521621 TMX1Q9H3N1 280 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 SEMA6BQ9H3T3 888 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms