RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 SLITRK3O94933 977 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 RPN1P04843 607 aaKnown RBP24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 PSMC6P62333 389 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 ZNF658Q5TYW1 1059 aaPredicted RBP24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 KRT79Q5XKE5 535 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 TPH2Q8IWU9 490 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 SNX29Q8TEQ0 813 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 DIS3LQ8TF46 1054 aaKnown RBP24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 LXNQ9BS40 222 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 SAMSN1Q9NSI8 373 aaKnown RBP24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 PHF24Q9UPV7 400 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 CCDC85CA6NKD9 419 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 MED24O75448 989 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 F2P00734 622 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 CCT6AP40227 531 aaKnown RBP24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 QARSP47897 775 aaKnown RBP24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 CDKAL1Q5VV42 579 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 PLPPR4Q7Z2D5 763 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 CATSPER3Q86XQ3 398 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 AFAP1L1Q8TED9 768 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 KBTBD4Q9NVX7 518 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 WRAP73Q9P2S5 460 aaPredicted RBP24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 ZNF215Q9UL58 517 aaPredicted RBP24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 MAFBQ9Y5Q3 323 aaPredicted RBP24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 STK24Q9Y6E0 443 aa24.47■■□□□ 1.51
PTP4A3-204ENST00000521578 IGSF9BQ9UPX0 1349 aa24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 A0A1W2PQ45 241 aaPredicted RBP24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 A0A1W2PQY0 241 aa24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 ZNF862O60290 1169 aa24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 SPATA31C1P0DKV0 1188 aa24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 PSMC5P62195 406 aa24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 KIAA0753Q2KHM9 967 aa24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 HAUS3Q68CZ6 603 aa24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 ANKLE1Q8NAG6 615 aa24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 MYRIPQ8NFW9 859 aa24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 RASSF8Q8NHQ8 419 aa24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 ATP6V0A1Q93050 837 aa24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 GLT1D1Q96MS3 346 aa24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 MMTAG2Q9BU76 263 aaKnown RBP24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 ERAP1Q9NZ08 941 aa24.46■■□□□ 1.51
PTP4A3-204ENST00000521578 UQCRHLA0A096LP55 91 aa24.45■■□□□ 1.5
PTP4A3-204ENST00000521578 POTEB3A0JP26 581 aa24.45■■□□□ 1.5
PTP4A3-204ENST00000521578 UQCRHP07919 91 aa24.45■■□□□ 1.5
PTP4A3-204ENST00000521578 ATP4AP20648 1035 aa24.45■■□□□ 1.5
PTP4A3-204ENST00000521578 PSEN2P49810 448 aa24.45■■□□□ 1.5
PTP4A3-204ENST00000521578 TBX2Q13207 712 aaPredicted RBP24.45■■□□□ 1.5
PTP4A3-204ENST00000521578 KCNB1Q14721 858 aa24.45■■□□□ 1.5
PTP4A3-204ENST00000521578 MFSD10Q14728 455 aa24.45■■□□□ 1.5
PTP4A3-204ENST00000521578 TPD52L1Q16890 204 aaPredicted RBP24.45■■□□□ 1.5
PTP4A3-204ENST00000521578 POTEBQ6S5H4 581 aa24.45■■□□□ 1.5
PTP4A3-204ENST00000521578 CABP7Q86V35 215 aa24.45■■□□□ 1.5
PTP4A3-204ENST00000521578 RNPEPQ9H4A4 650 aa24.45■■□□□ 1.5
PTP4A3-204ENST00000521578 RWDD2AQ9UIY3 292 aa24.45■■□□□ 1.5
PTP4A3-204ENST00000521578 A0A1B0GTH6 734 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 NRDCO43847 1150 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 RPA1P27694 616 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 SOX10P56693 466 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 NR1I3Q14994 352 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 ECM1Q16610 540 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 NEK9Q8TD19 979 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 PAWRQ96IZ0 340 aaKnown RBP24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 POLR3CQ9BUI4 534 aaPredicted RBP24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 SENP6Q9GZR1 1112 aaPredicted RBP24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 TMX1Q9H3N1 280 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 ZSWIM4Q9H7M6 989 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 CABYRO75952 493 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 PRKCEQ02156 737 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 PLCB4Q15147 1175 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 KLHL10Q6JEL2 608 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 APTXQ7Z2E3 356 aaKnown RBP24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 SMYD4Q8IYR2 804 aaPredicted RBP24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 CCAR2Q8N163 923 aaKnown RBP24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 CCDC112Q8NEF3 446 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 PLIN2Q99541 437 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 KATNAL1Q9BW62 490 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 TUFT1Q9NNX1 390 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 STARD7Q9NQZ5 370 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 SCN10AQ9Y5Y9 1956 aa24.44■■□□□ 1.5
PTP4A3-204ENST00000521578 SLC26A2P50443 739 aa24.43■■□□□ 1.5
PTP4A3-204ENST00000521578 NBPF20Q3BBV1 942 aa24.43■■□□□ 1.5
PTP4A3-204ENST00000521578 POTEGQ6S5H5 508 aa24.43■■□□□ 1.5
PTP4A3-204ENST00000521578 CALML4Q96GE6 196 aa24.43■■□□□ 1.5
PTP4A3-204ENST00000521578 TRPC6Q9Y210 931 aa24.43■■□□□ 1.5
PTP4A3-204ENST00000521578 HAS3O00219 553 aa24.42■■□□□ 1.5
PTP4A3-204ENST00000521578 ZBTB39O15060 712 aa24.42■■□□□ 1.5
PTP4A3-204ENST00000521578 SLC26A4O43511 780 aa24.42■■□□□ 1.5
PTP4A3-204ENST00000521578 CAPN2P17655 700 aa24.42■■□□□ 1.5
PTP4A3-204ENST00000521578 KIAA1024Q9UPX6 916 aa24.42■■□□□ 1.5
PTP4A3-204ENST00000521578 GRIN2DO15399 1336 aa24.42■■□□□ 1.5
PTP4A3-204ENST00000521578 TMEM150BA6NC51 233 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 DKC1O60832 514 aaKnown RBP eCLIP24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 OATP04181 439 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 GTF2F1P35269 517 aaKnown RBP eCLIP24.41■■□□□ 1.52e-7■■■■■ 33.2
PTP4A3-204ENST00000521578 STX17P56962 302 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 HSP90AA4PQ58FG1 418 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 SPECC1LQ69YQ0 1117 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 NYAP1Q6ZVC0 841 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 C4orf19Q8IY42 314 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 CDK5RAP3Q96JB5 506 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 CTAGE1Q96RT6 745 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms