RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 Q7L0L9 218 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 HERC6Q8IVU3 1022 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 CKAP2LQ8IYA6 745 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 SLFN12Q8IYM2 578 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 RASGRP4Q8TDF6 673 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 PPP1R13LQ8WUF5 828 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 PCYT2Q99447 389 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 CDX2Q99626 313 aaPredicted RBP11.5□□□□□ -0.57
TRIM35-204ENST00000521283 FTHL17Q9BXU8 183 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 DISC1Q9NRI5 854 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 DDX25Q9UHL0 483 aaKnown RBP11.5□□□□□ -0.57
TRIM35-204ENST00000521283 RBM19Q9Y4C8 960 aaKnown RBP11.5□□□□□ -0.57
TRIM35-204ENST00000521283 KDM3AQ9Y4C1 1321 aa11.5□□□□□ -0.57
TRIM35-204ENST00000521283 MICAL3Q7RTP6 2002 aa11.49□□□□□ -0.57
TRIM35-204ENST00000521283 DDX39AO00148 427 aaKnown RBP11.49□□□□□ -0.57
TRIM35-204ENST00000521283 TLL1O43897 1013 aa11.49□□□□□ -0.57
TRIM35-204ENST00000521283 CTDNEP1O95476 244 aa11.49□□□□□ -0.57
TRIM35-204ENST00000521283 WDR5P61964 334 aaKnown RBP11.49□□□□□ -0.57
TRIM35-204ENST00000521283 MRPS6P82932 125 aaKnown RBP11.49□□□□□ -0.57
TRIM35-204ENST00000521283 GPNMBQ14956 572 aa11.49□□□□□ -0.57
TRIM35-204ENST00000521283 NPY5RQ15761 445 aa11.49□□□□□ -0.57
TRIM35-204ENST00000521283 KMT5BQ4FZB7 885 aa11.49□□□□□ -0.57
TRIM35-204ENST00000521283 MARCH8Q5T0T0 291 aa11.49□□□□□ -0.57
TRIM35-204ENST00000521283 PPP2R2DQ66LE6 453 aa11.49□□□□□ -0.57
TRIM35-204ENST00000521283 MTHFD1LQ6UB35 978 aa11.49□□□□□ -0.57
TRIM35-204ENST00000521283 NSUN7Q8NE18 718 aaKnown RBP11.49□□□□□ -0.57
TRIM35-204ENST00000521283 DBF4BQ8NFT6 615 aa11.49□□□□□ -0.57
TRIM35-204ENST00000521283 GUCD1Q96NT3 240 aa11.49□□□□□ -0.57
TRIM35-204ENST00000521283 RAD9AQ99638 391 aa11.49□□□□□ -0.57
TRIM35-204ENST00000521283 JPH2Q9BR39 696 aaPredicted RBP11.49□□□□□ -0.57
TRIM35-204ENST00000521283 IFIH1Q9BYX4 1025 aaKnown RBP11.49□□□□□ -0.57
TRIM35-204ENST00000521283 TTYH1Q9H313 450 aaPredicted RBP11.49□□□□□ -0.57
TRIM35-204ENST00000521283 PPME1Q9Y570 386 aa11.49□□□□□ -0.57
TRIM35-204ENST00000521283 INSL6Q9Y581 213 aa11.49□□□□□ -0.57
TRIM35-204ENST00000521283 GRXCR1A8MXD5 290 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 MARCH6O60337 910 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 PPFIA3O75145 1194 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 PSMD10O75832 226 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 GJB5O95377 273 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 MMP1P03956 469 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 FDPSP14324 419 aaKnown RBP11.48□□□□□ -0.57
TRIM35-204ENST00000521283 FOSL2P15408 326 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 KLRC1P26715 233 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 IGBP1P78318 339 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 ORC2Q13416 577 aaPredicted RBP11.48□□□□□ -0.57
TRIM35-204ENST00000521283 MBTPS1Q14703 1052 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 INF2Q27J81 1249 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 LETM2Q2VYF4 491 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 TSHZ1Q6ZSZ6 1077 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 MIER3Q7Z3K6 550 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 CCDC60Q8IWA6 550 aaPredicted RBP11.48□□□□□ -0.57
TRIM35-204ENST00000521283 DNAJB3Q8WWF6 145 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 WNT8BQ93098 351 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 SAMD11Q96NU1 681 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 GABBR1Q9UBS5 961 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 KCNJ14Q9UNX9 436 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 TELO2Q9Y4R8 837 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 TRPV2Q9Y5S1 764 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 IGSF9BQ9UPX0 1349 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 EVPLQ92817 2033 aa11.48□□□□□ -0.57
TRIM35-204ENST00000521283 CCNT1O60563 726 aaKnown RBP11.47□□□□□ -0.57
TRIM35-204ENST00000521283 CHRNA1P02708 482 aa11.47□□□□□ -0.57
TRIM35-204ENST00000521283 MGAT3Q09327 533 aa11.47□□□□□ -0.57
TRIM35-204ENST00000521283 PPP2R5CQ13362 524 aa11.47□□□□□ -0.57
TRIM35-204ENST00000521283 XKR3Q5GH77 459 aa11.47□□□□□ -0.57
TRIM35-204ENST00000521283 PIK3AP1Q6ZUJ8 805 aa11.47□□□□□ -0.57
TRIM35-204ENST00000521283 NECAB1Q8N987 351 aa11.47□□□□□ -0.57
TRIM35-204ENST00000521283 FAM184AQ8NB25 1140 aa11.47□□□□□ -0.57
TRIM35-204ENST00000521283 ETNPPLQ8TBG4 499 aa11.47□□□□□ -0.57
TRIM35-204ENST00000521283 FAM161BQ96MY7 647 aa11.47□□□□□ -0.57
TRIM35-204ENST00000521283 AIFM3Q96NN9 605 aa11.47□□□□□ -0.57
TRIM35-204ENST00000521283 PHOX2BQ99453 314 aa11.47□□□□□ -0.57
TRIM35-204ENST00000521283 CELF4Q9BZC1 486 aaKnown RBP11.47□□□□□ -0.57
TRIM35-204ENST00000521283 NKX2-4Q9H2Z4 354 aa11.47□□□□□ -0.57
TRIM35-204ENST00000521283 KCNMB3Q9NPA1 279 aa11.47□□□□□ -0.57
TRIM35-204ENST00000521283 ADAMTS3O15072 1205 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 GPR182O15218 404 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 EDIL3O43854 480 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 TDP2O95551 362 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 P4HBP07237 508 aaKnown RBP11.46□□□□□ -0.57
TRIM35-204ENST00000521283 CTSHP09668 335 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 POU3F3P20264 500 aaPredicted RBP11.46□□□□□ -0.57
TRIM35-204ENST00000521283 DNM2P50570 870 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 PSMC5P62195 406 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 GRIN2CQ14957 1233 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 FBXO47Q5MNV8 452 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 B3GNT9Q6UX72 402 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 RUFY4Q6ZNE9 571 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 GPIHBP1Q8IV16 184 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 NLRP7Q8WX94 980 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 TOP1MTQ969P6 601 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 C8orf76Q96K31 380 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 MAP7D2Q96T17 732 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 TMUB1Q9BVT8 246 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 NIFKQ9BYG3 293 aaKnown RBP11.46□□□□□ -0.57
TRIM35-204ENST00000521283 FOXP1Q9H334 677 aaPredicted RBP11.46□□□□□ -0.57
TRIM35-204ENST00000521283 UNC45AQ9H3U1 944 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 LMCD1Q9NZU5 365 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 RWDD3Q9Y3V2 267 aa11.46□□□□□ -0.57
TRIM35-204ENST00000521283 CDY2AQ9Y6F7 541 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms