RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 FSIP1Q8NA03 581 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 NOA1Q8NC60 698 aaKnown RBP9.44□□□□□ -0.9
SHPRH-208ENST00000520752 GALNT11Q8NCW6 608 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 KCNN1Q92952 543 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 SEC16BQ96JE7 1060 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 NDNQ99608 321 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 LSG1Q9H089 658 aaKnown RBP9.44□□□□□ -0.9
SHPRH-208ENST00000520752 TBCCD1Q9NVR7 557 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 PDP2Q9P2J9 529 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 STK17AQ9UEE5 414 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 CROTQ9UKG9 612 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 SLC12A4Q9UP95 1085 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 WDR17Q8IZU2 1322 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 SAMD9LQ8IVG5 1584 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 ATP7BP35670 1465 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 NSD3Q9BZ95 1437 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 ABCC12Q96J65 1359 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 TMEM110-MUSTN1A8MSY1 372 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 DLL1O00548 723 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 ENC1O14682 589 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 TRAPPC3O43617 180 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 SSBP05455 408 aaKnown RBP eCLIP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 IFIT2P09913 472 aaKnown RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 ACADSP16219 412 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 ZKSCAN1P17029 563 aaPredicted RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 IBSPP21815 317 aaPredicted RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 CASP14P31944 242 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 GBP1P32455 592 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 SERPINB8P50452 374 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 USP11P51784 963 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 LACTBP83111 547 aaPredicted RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 SPIDRQ14159 915 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 SUZ12Q15022 739 aaKnown RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 KARSQ15046 597 aaKnown RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 PAPD7Q5XG87 772 aaKnown RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 OLFML1Q6UWY5 402 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 OLFM4Q6UX06 510 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 NCCRP1Q6ZVX7 275 aaPredicted RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 TMEM110Q86TL2 294 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 ANKRD13BQ86YJ7 626 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 SLC35F6Q8N357 371 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 NME8Q8N427 588 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 EIF1ADQ8N9N8 165 aaKnown RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 SLC7A3Q8WY07 619 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 RIN2Q8WYP3 895 aaPredicted RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 CENPTQ96BT3 561 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 KLHDC7BQ96G42 594 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 IFT74Q96LB3 600 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 RNPC3Q96LT9 517 aaKnown RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 EIF2AQ9BY44 585 aaKnown RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 SIL1Q9H173 461 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 MRPL44Q9H9J2 332 aaKnown RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 KCNMB3Q9NPA1 279 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 GPN3Q9UHW5 284 aaPredicted RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 RPL26L1Q9UNX3 145 aaKnown RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 COMMD3-BMI1R4GMX3 469 aa9.43□□□□□ -0.9
SHPRH-208ENST00000520752 SETD1BQ9UPS6 1966 aaKnown RBP9.43□□□□□ -0.9
SHPRH-208ENST00000520752 ABCC6O95255 1503 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 ANO9A1A5B4 782 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 BTBD19C9JJ37 291 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 E7EVH7 732 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 PFDN1O60925 122 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 FBXO24O75426 580 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 TRIM37O94972 964 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 RXRBP28702 533 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 FLT3P36888 993 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 ACADVLP49748 655 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 OXCT1P55809 520 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 PAK2Q13177 524 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 ADAM9Q13443 819 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 BIRC3Q13489 604 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 CCDC85BQ15834 202 aaPredicted RBP9.42□□□□□ -0.9
SHPRH-208ENST00000520752 INAQ16352 499 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 TTMPQ5BVD1 217 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 PRRT3Q5FWE3 981 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 CREB3L3Q68CJ9 461 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 CEP128Q6ZU80 1094 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 CNBD1Q8NA66 436 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 MLKLQ8NB16 471 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 CCDC197Q8NCU1 140 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 AGAP11Q8TF27 550 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 ATP6V1G3Q96LB4 118 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 TIPINQ9BVW5 301 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 C19orf44Q9H6X5 657 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 IGSF5Q9NSI5 407 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 SCOCQ9UIL1 159 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 TUBE1Q9UJT0 475 aa9.42□□□□□ -0.9
SHPRH-208ENST00000520752 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.41□□□□□ -0.9
SHPRH-208ENST00000520752 ASAP2O43150 1006 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 HIP1RO75146 1068 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 TSPY4P0CV99 314 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 TSPY10P0CW01 314 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 ELNP15502 786 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 NQO1P15559 274 aaKnown RBP9.41□□□□□ -0.9
SHPRH-208ENST00000520752 SP100P23497 879 aaPredicted RBP9.41□□□□□ -0.9
SHPRH-208ENST00000520752 HOXA10P31260 410 aaPredicted RBP9.41□□□□□ -0.9
SHPRH-208ENST00000520752 CD68P34810 354 aaPredicted RBP9.41□□□□□ -0.9
SHPRH-208ENST00000520752 ZNF157P51786 506 aaPredicted RBP9.41□□□□□ -0.9
SHPRH-208ENST00000520752 VAV2P52735 878 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 GSTM4Q03013 218 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms