RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 SH3RF3Q8TEJ3 882 aaPredicted RBP12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 PCIF1Q9H4Z3 704 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 SAMSN1Q9NSI8 373 aaKnown RBP12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 EMILIN3Q9NT22 766 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 GCNT4Q9P109 453 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 PTPN22Q9Y2R2 807 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 SERPING1P05155 500 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 VCAM1P19320 739 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 FBXW10Q5XX13 1052 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 ALS2CLQ60I27 953 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 RNF207Q6ZRF8 634 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 FAM133AQ8N9E0 248 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 UNC45AQ9H3U1 944 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 CNOT10Q9H9A5 744 aaKnown RBP12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 WDR19Q8NEZ3 1342 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 CDHR2Q9BYE9 1310 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 SOWAHDA6NJG2 315 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 ATXN8OSP0DMR3 200 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 SLC12A1Q13621 1099 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 TTBK2Q6IQ55 1244 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 NANOGNBQ7Z5D8 188 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 CEP170P1Q96L14 293 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 SMYD2Q9NRG4 433 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 H7C0C1 242 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 MYO1FO00160 1098 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 WBP4O75554 376 aaKnown RBP12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 MOCS3O95396 460 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 ATP5OP48047 213 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 ADCY2Q08462 1091 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 TCP11X2Q5H9J9 407 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 NAA35Q5VZE5 725 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 CAPN12Q6ZSI9 719 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 TMTC3Q6ZXV5 915 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 DPP9Q86TI2 863 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 PANX2Q96RD6 677 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 RXRBP28702 533 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 ALCAMQ13740 583 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 PTPN21Q16825 1174 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 ATG16L1Q676U5 607 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 FAM43BQ6ZT52 329 aaPredicted RBP12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 CACTINQ8WUQ7 758 aaKnown RBP12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 EEF2KMTQ96G04 330 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 TUBB6Q9BUF5 446 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 RHBDL2Q9NX52 303 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 SETBP1Q9Y6X0 1596 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 CCDC159P0C7I6 412 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 PTPREP23469 700 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 IFRD2Q12894 506 aaPredicted RBP12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 GLE1Q53GS7 698 aaKnown RBP12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 ZC3H18Q86VM9 953 aaKnown RBP12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 TBC1D10CQ8IV04 446 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 PARVGQ9HBI0 331 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 A0A1B0GW55 424 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 SGK1O00141 431 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 E2F6O75461 281 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 DUX4L2P0CJ85 424 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 DUX4L3P0CJ86 424 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 DUX4L4P0CJ87 422 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 DUX4L5P0CJ88 424 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 DUX4L6P0CJ89 424 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 DUX4L7P0CJ90 424 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 C2orf54Q08AI8 447 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 THOC1Q96FV9 657 aaKnown RBP12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 APOL6Q9BWW8 343 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 DUX4Q9UBX2 424 aa12.97□□□□□ -0.33
ERGIC1-208ENST00000520399 MEFVO15553 781 aaPredicted RBP12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 PPP4R3CPQ6ZMV5 832 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 BRINP3Q76B58 766 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 MASTLQ96GX5 879 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 PBKQ96KB5 322 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 AIFM3Q96NN9 605 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 DKK3Q9UBP4 350 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 PCDHA13Q9Y5I0 950 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 A0A087WWV3 80 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 MED7O43513 233 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 IGKV5-2P06315 115 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 PDHA1P08559 390 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 EPHB4P54760 987 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 DGKHQ86XP1 1220 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 ARL10Q8N8L6 244 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 GPR101Q96P66 508 aaPredicted RBP12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 UBE2TQ9NPD8 197 aaPredicted RBP12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 PAPOLBQ9NRJ5 636 aaKnown RBP12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 MED14O60244 1454 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 GFPT2O94808 682 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 HLA-DPA1P20036 260 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 FOXP4Q8IVH2 680 aaPredicted RBP12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 RTKN2Q8IZC4 609 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 SLC8A2Q9UPR5 921 aa12.96□□□□□ -0.33
ERGIC1-208ENST00000520399 COL15A1P39059 1388 aa12.96□□□□□ -0.34
ERGIC1-208ENST00000520399 CYP27B1O15528 508 aa12.96□□□□□ -0.34
ERGIC1-208ENST00000520399 RPS6KA4O75676 772 aa12.96□□□□□ -0.34
ERGIC1-208ENST00000520399 ZBED6P86452 979 aa12.96□□□□□ -0.34
ERGIC1-208ENST00000520399 LRRC63Q05C16 580 aa12.96□□□□□ -0.34
ERGIC1-208ENST00000520399 EPHA10Q5JZY3 1008 aa12.96□□□□□ -0.34
ERGIC1-208ENST00000520399 FAM182BQ5T319 152 aa12.96□□□□□ -0.34
ERGIC1-208ENST00000520399 TBC1D1Q86TI0 1168 aaPredicted RBP12.96□□□□□ -0.34
ERGIC1-208ENST00000520399 POLE3Q9NRF9 147 aa12.96□□□□□ -0.34
ERGIC1-208ENST00000520399 LRRC7Q96NW7 1537 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms