RNA–Protein interactions for RNA: ENST00000519674.1

TRPS1-209, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-209ENST00000519674 ATP2C1P98194 919 aaPredicted RBP9.18□□□□□ -0.94
TRPS1-209ENST00000519674 SULT2A1Q06520 285 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 FAM133BQ5BKY9 247 aaKnown RBP9.18□□□□□ -0.94
TRPS1-209ENST00000519674 AGBL2Q5U5Z8 902 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 TYW1BQ6NUM6 668 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 C8orf74Q6P047 294 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 C15orf52Q6ZUT6 534 aaKnown RBP9.18□□□□□ -0.94
TRPS1-209ENST00000519674 ATP11CQ8NB49 1132 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 STAMQ92783 540 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 TBC1D7Q9P0N9 293 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 MAD2L2Q9UI95 211 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 ATP8A1Q9Y2Q0 1164 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 FAM205AQ6ZU69 1335 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 GLI1P08151 1106 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 IL1R1P14778 569 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 RASA1P20936 1047 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 CALB2P22676 271 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 ADCY1Q08828 1119 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 INF2Q27J81 1249 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 SPATA1Q5VX52 437 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 TMEM110Q86TL2 294 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 LRRC43Q8N309 656 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 TBC1D16Q8TBP0 767 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 PPP2R3CQ969Q6 453 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 TMEM47Q9BQJ4 181 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.18□□□□□ -0.94
TRPS1-209ENST00000519674 FAM129AQ9BZQ8 928 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 CPVLQ9H3G5 476 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 RNPEPL1Q9HAU8 725 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 RHBDL2Q9NX52 303 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 TFR2Q9UP52 801 aa9.18□□□□□ -0.94
TRPS1-209ENST00000519674 CYTH3O43739 400 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 PFDN1O60925 122 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 CAPN15O75808 1086 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 ALOX15P16050 662 aaPredicted RBP9.17□□□□□ -0.94
TRPS1-209ENST00000519674 FUT4P22083 530 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 LSAMPQ13449 338 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 GRM4Q14833 912 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 SLC35G1Q2M3R5 365 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 HEATR3Q7Z4Q2 680 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 BLIDQ8IZY5 108 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 ARHGAP18Q8N392 663 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 SPATA20Q8TB22 786 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 PAGE5Q96GU1 130 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 XPO6Q96QU8 1125 aaKnown RBP9.17□□□□□ -0.94
TRPS1-209ENST00000519674 ECT2Q9H8V3 914 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 ABCF3Q9NUQ8 709 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 NKX1-2Q9UD57 310 aaPredicted RBP9.17□□□□□ -0.94
TRPS1-209ENST00000519674 SCOCQ9UIL1 159 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 MYH1P12882 1939 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 FLT1P17948 1338 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 MYH7BA7E2Y1 1941 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 RIMBP2O15034 1052 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 BBOX1O75936 387 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 UBOX5O94941 541 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 HARSP12081 509 aaKnown RBP9.17□□□□□ -0.94
TRPS1-209ENST00000519674 KRT9P35527 623 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 KRT83P78385 493 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 MCL1Q07820 350 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 ZNF844Q08AG5 666 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 BNIP1Q12981 228 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 KLHL10Q6JEL2 608 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRPS1-209ENST00000519674 SMYD4Q8IYR2 804 aaPredicted RBP9.17□□□□□ -0.94
TRPS1-209ENST00000519674 ATP8B4Q8TF62 1192 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 NOC3LQ8WTT2 800 aaKnown RBP9.17□□□□□ -0.94
TRPS1-209ENST00000519674 EYA3Q99504 573 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 LACRTQ9GZZ8 138 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 NACA2Q9H009 215 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 RAB17Q9H0T7 212 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 QTRT2Q9H974 415 aaKnown RBP9.17□□□□□ -0.94
TRPS1-209ENST00000519674 SH3GLB1Q9Y371 365 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 SYNRGQ9UMZ2 1314 aa9.17□□□□□ -0.94
TRPS1-209ENST00000519674 DDX60LQ5H9U9 1706 aaKnown RBP9.16□□□□□ -0.94
TRPS1-209ENST00000519674 RCCD1A6NED2 376 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 POLRMTO00411 1230 aaKnown RBP9.16□□□□□ -0.94
TRPS1-209ENST00000519674 BCRP11274 1271 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 CALML3P27482 149 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 CDC25AP30304 524 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 GBP1P32455 592 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 TRAPPC10P48553 1259 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 CDK8P49336 464 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 SF3A3Q12874 501 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRPS1-209ENST00000519674 IL17AQ16552 155 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 SH2D4BQ5SQS7 431 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 CEP128Q6ZU80 1094 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 LONP2Q86WA8 852 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 FBF1Q8TES7 1133 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRPS1-209ENST00000519674 ANKS1AQ92625 1134 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 KLHL29Q96CT2 875 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 MPHOSPH6Q99547 160 aaKnown RBP9.16□□□□□ -0.94
TRPS1-209ENST00000519674 NUP88Q99567 741 aaPredicted RBP9.16□□□□□ -0.94
TRPS1-209ENST00000519674 CARD9Q9H257 536 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 CNOT10Q9H9A5 744 aaKnown RBP9.16□□□□□ -0.94
TRPS1-209ENST00000519674 RMND1Q9NWS8 449 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 DDX25Q9UHL0 483 aaKnown RBP9.16□□□□□ -0.94
TRPS1-209ENST00000519674 PCDHA4Q9UN74 947 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 SNED1Q8TER0 1413 aa9.16□□□□□ -0.94
TRPS1-209ENST00000519674 GNA14O95837 355 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms